RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 TCF19Q9Y242 345 aa12.27□□□□□ -0.45
VIPAS39-202ENST00000343765 WDR83OSQ9Y284 106 aa12.27□□□□□ -0.45
VIPAS39-202ENST00000343765 TPRP12270 2363 aaKnown RBP12.27□□□□□ -0.45
VIPAS39-202ENST00000343765 A0A0G2JNJ9 132 aa12.26□□□□□ -0.45
VIPAS39-202ENST00000343765 S100A8P05109 93 aa12.26□□□□□ -0.45
VIPAS39-202ENST00000343765 CGB3P0DN86 165 aa12.26□□□□□ -0.45
VIPAS39-202ENST00000343765 CGB7P0DN87 165 aa12.26□□□□□ -0.45
VIPAS39-202ENST00000343765 TNFSF4P23510 183 aa12.26□□□□□ -0.45
VIPAS39-202ENST00000343765 MRPS11P82912 194 aaKnown RBP12.26□□□□□ -0.45
VIPAS39-202ENST00000343765 ACOT6Q3I5F7 207 aaPredicted RBP12.26□□□□□ -0.45
VIPAS39-202ENST00000343765 C4orf17Q53FE4 359 aa12.26□□□□□ -0.45
VIPAS39-202ENST00000343765 ARFGEF3Q5TH69 2177 aa12.26□□□□□ -0.45
VIPAS39-202ENST00000343765 Q8N7P7 452 aa12.26□□□□□ -0.45
VIPAS39-202ENST00000343765 OR5T1Q8NG75 326 aa12.26□□□□□ -0.45
VIPAS39-202ENST00000343765 ABHD17AQ96GS6 310 aa12.26□□□□□ -0.45
VIPAS39-202ENST00000343765 RHOVQ96L33 236 aa12.26□□□□□ -0.45
VIPAS39-202ENST00000343765 PARLQ9H300 379 aa12.26□□□□□ -0.45
VIPAS39-202ENST00000343765 Q9UFV3 132 aa12.26□□□□□ -0.45
VIPAS39-202ENST00000343765 TET2Q6N021 2002 aaPredicted RBP12.26□□□□□ -0.45
VIPAS39-202ENST00000343765 TMPRSS2O15393 492 aa12.26□□□□□ -0.45
VIPAS39-202ENST00000343765 OPN1MWP04001 364 aa12.26□□□□□ -0.45
VIPAS39-202ENST00000343765 OPN1MW2P0DN77 364 aa12.26□□□□□ -0.45
VIPAS39-202ENST00000343765 OPN1MW3P0DN78 364 aa12.26□□□□□ -0.45
VIPAS39-202ENST00000343765 NDUFB7P17568 137 aa12.26□□□□□ -0.45
VIPAS39-202ENST00000343765 GATA4P43694 442 aa12.26□□□□□ -0.45
VIPAS39-202ENST00000343765 VDAC2P45880 294 aaPredicted RBP12.26□□□□□ -0.45
VIPAS39-202ENST00000343765 RAB7AP51149 207 aa12.26□□□□□ -0.45
VIPAS39-202ENST00000343765 MS4A5Q9H3V2 200 aa12.26□□□□□ -0.45
VIPAS39-202ENST00000343765 NAT8Q9UHE5 227 aa12.26□□□□□ -0.45
VIPAS39-202ENST00000343765 RAI1Q7Z5J4 1906 aaPredicted RBP12.26□□□□□ -0.45
VIPAS39-202ENST00000343765 RBFOX2O43251 390 aaKnown RBP eCLIP12.25□□□□□ -0.45
VIPAS39-202ENST00000343765 GFRA3O60609 400 aa12.25□□□□□ -0.45
VIPAS39-202ENST00000343765 IRF2P14316 349 aa12.25□□□□□ -0.45
VIPAS39-202ENST00000343765 TMEM241Q24JQ0 296 aa12.25□□□□□ -0.45
VIPAS39-202ENST00000343765 CLEC12BQ2HXU8 276 aa12.25□□□□□ -0.45
VIPAS39-202ENST00000343765 DOLPP1Q86YN1 238 aa12.25□□□□□ -0.45
VIPAS39-202ENST00000343765 ZNF383Q8NA42 475 aa12.25□□□□□ -0.45
VIPAS39-202ENST00000343765 TMEM170AQ8WVE7 144 aa12.25□□□□□ -0.45
VIPAS39-202ENST00000343765 DDB2Q92466 427 aa12.25□□□□□ -0.45
VIPAS39-202ENST00000343765 TP53TG5Q9Y2B4 290 aa12.25□□□□□ -0.45
VIPAS39-202ENST00000343765 MKRN2OSH3BPM6 223 aa12.25□□□□□ -0.45
VIPAS39-202ENST00000343765 KBTBD11O94819 623 aa12.25□□□□□ -0.45
VIPAS39-202ENST00000343765 RPP30P78346 268 aaKnown RBP12.25□□□□□ -0.45
VIPAS39-202ENST00000343765 KRTCAP3Q53RY4 240 aa12.25□□□□□ -0.45
VIPAS39-202ENST00000343765 OR4A47Q6IF82 309 aa12.25□□□□□ -0.45
VIPAS39-202ENST00000343765 TREML4Q6UXN2 200 aa12.25□□□□□ -0.45
VIPAS39-202ENST00000343765 C16orf82Q7Z2V1 217 aa12.25□□□□□ -0.45
VIPAS39-202ENST00000343765 FAM222BQ8WU58 562 aa12.25□□□□□ -0.45
VIPAS39-202ENST00000343765 SSMEM1Q8WWF3 244 aa12.25□□□□□ -0.45
VIPAS39-202ENST00000343765 MANBALQ9NQG1 85 aa12.25□□□□□ -0.45
VIPAS39-202ENST00000343765 DOK5Q9P104 306 aa12.25□□□□□ -0.45
VIPAS39-202ENST00000343765 SMIM6P0DI80 62 aa12.24□□□□□ -0.45
VIPAS39-202ENST00000343765 COL8A2P25067 703 aa12.24□□□□□ -0.45
VIPAS39-202ENST00000343765 C3orf36Q3SXR2 165 aa12.24□□□□□ -0.45
VIPAS39-202ENST00000343765 PDZD11Q5EBL8 140 aa12.24□□□□□ -0.45
VIPAS39-202ENST00000343765 MIC13Q5XKP0 118 aa12.24□□□□□ -0.45
VIPAS39-202ENST00000343765 TMEM108Q6UXF1 575 aa12.24□□□□□ -0.45
VIPAS39-202ENST00000343765 SPNS3Q6ZMD2 512 aa12.24□□□□□ -0.45
VIPAS39-202ENST00000343765 CYP2G1PQ6ZSU1 146 aa12.24□□□□□ -0.45
VIPAS39-202ENST00000343765 OR51G1Q8NGK1 321 aa12.24□□□□□ -0.45
VIPAS39-202ENST00000343765 NIT2Q9NQR4 276 aa12.24□□□□□ -0.45
VIPAS39-202ENST00000343765 ASH1LQ9NR48 2969 aaKnown RBP12.24□□□□□ -0.45
VIPAS39-202ENST00000343765 A0A1W2PPV4 95 aa12.24□□□□□ -0.45
VIPAS39-202ENST00000343765 C11orf94C9JXX5 98 aa12.24□□□□□ -0.45
VIPAS39-202ENST00000343765 PRRG2O14669 202 aa12.24□□□□□ -0.45
VIPAS39-202ENST00000343765 KIR2DS2P43631 304 aa12.24□□□□□ -0.45
VIPAS39-202ENST00000343765 PDLIM3Q53GG5 364 aaPredicted RBP12.24□□□□□ -0.45
VIPAS39-202ENST00000343765 CST9LP1Q5W188 147 aa12.24□□□□□ -0.45
VIPAS39-202ENST00000343765 RND1Q92730 232 aa12.24□□□□□ -0.45
VIPAS39-202ENST00000343765 MGST2Q99735 147 aa12.24□□□□□ -0.45
VIPAS39-202ENST00000343765 ZNF251Q9BRH9 671 aa12.24□□□□□ -0.45
VIPAS39-202ENST00000343765 FAM90A9PA6NNJ1 464 aa12.24□□□□□ -0.45
VIPAS39-202ENST00000343765 HIST1H2BKO60814 126 aa12.24□□□□□ -0.45
VIPAS39-202ENST00000343765 HIST1H2BJP06899 126 aa12.24□□□□□ -0.45
VIPAS39-202ENST00000343765 HIST1H2BOP23527 126 aa12.24□□□□□ -0.45
VIPAS39-202ENST00000343765 HIST1H2BBP33778 126 aa12.24□□□□□ -0.45
VIPAS39-202ENST00000343765 HIST1H2BDP58876 126 aa12.24□□□□□ -0.45
VIPAS39-202ENST00000343765 HIST1H2BCP62807 126 aa12.24□□□□□ -0.45
VIPAS39-202ENST00000343765 RPL23P62829 140 aaKnown RBP12.24□□□□□ -0.45
VIPAS39-202ENST00000343765 HIST2H2BEQ16778 126 aa12.24□□□□□ -0.45
VIPAS39-202ENST00000343765 BSXQ3C1V8 233 aa12.24□□□□□ -0.45
VIPAS39-202ENST00000343765 AARDQ4LEZ3 155 aa12.24□□□□□ -0.45
VIPAS39-202ENST00000343765 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.24□□□□□ -0.45
VIPAS39-202ENST00000343765 HIST1H2BHQ93079 126 aa12.24□□□□□ -0.45
VIPAS39-202ENST00000343765 HIST1H2BNQ99877 126 aa12.24□□□□□ -0.45
VIPAS39-202ENST00000343765 HIST1H2BMQ99879 126 aa12.24□□□□□ -0.45
VIPAS39-202ENST00000343765 TMEM204Q9BSN7 226 aa12.24□□□□□ -0.45
VIPAS39-202ENST00000343765 SEBOXQ9HB31 216 aaPredicted RBP12.24□□□□□ -0.45
VIPAS39-202ENST00000343765 AURKAIP1Q9NWT8 199 aaPredicted RBP12.24□□□□□ -0.45
VIPAS39-202ENST00000343765 IDI2-AS1Q9NZ38 188 aa12.24□□□□□ -0.45
VIPAS39-202ENST00000343765 COL12A1Q99715 3063 aa12.23□□□□□ -0.45
VIPAS39-202ENST00000343765 DYSFO75923 2080 aa12.23□□□□□ -0.45
VIPAS39-202ENST00000343765 C15orf61A6NNL5 157 aa12.23□□□□□ -0.45
VIPAS39-202ENST00000343765 C16orf97H3BN30 126 aa12.23□□□□□ -0.45
VIPAS39-202ENST00000343765 OR4A8P0C604 315 aa12.23□□□□□ -0.45
VIPAS39-202ENST00000343765 TMEM250H0YL14 139 aa12.23□□□□□ -0.45
VIPAS39-202ENST00000343765 SOX15O60248 233 aa12.23□□□□□ -0.45
VIPAS39-202ENST00000343765 ATP5G3P48201 142 aa12.23□□□□□ -0.45
VIPAS39-202ENST00000343765 RND2P52198 227 aa12.23□□□□□ -0.45
VIPAS39-202ENST00000343765 BSPH1Q075Z2 132 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms