RNA–Protein interactions for RNA: ENST00000342740.5

CARMIL3-201, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CARMIL3, Length 4,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-201ENST00000342740 REG1AP05451 166 aa13.15□□□□□ -0.3
CARMIL3-201ENST00000342740 COX19Q49B96 90 aa13.15□□□□□ -0.3
CARMIL3-201ENST00000342740 NCMAPQ5T1S8 102 aa13.15□□□□□ -0.3
CARMIL3-201ENST00000342740 TOMM20LQ6UXN7 152 aa13.15□□□□□ -0.3
CARMIL3-201ENST00000342740 DNM1P46Q6ZS02 220 aa13.15□□□□□ -0.3
CARMIL3-201ENST00000342740 SGMS2Q8NHU3 365 aa13.15□□□□□ -0.3
CARMIL3-201ENST00000342740 FRMPD3Q5JV73 1810 aa13.15□□□□□ -0.3
CARMIL3-201ENST00000342740 MPDZO75970 2070 aa13.15□□□□□ -0.3
CARMIL3-201ENST00000342740 RNF222A6NCQ9 220 aa13.15□□□□□ -0.3
CARMIL3-201ENST00000342740 IGHV3-48P01763 117 aa13.15□□□□□ -0.3
CARMIL3-201ENST00000342740 ZNF146Q15072 292 aa13.15□□□□□ -0.3
CARMIL3-201ENST00000342740 RPRMQ9NS64 109 aa13.15□□□□□ -0.3
CARMIL3-201ENST00000342740 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.15□□□□□ -0.3
CARMIL3-201ENST00000342740 PLXNA4Q9HCM2 1894 aa13.15□□□□□ -0.3
CARMIL3-201ENST00000342740 TRAV14DV4A0A0A6YYC5 116 aa13.15□□□□□ -0.3
CARMIL3-201ENST00000342740 PTBP3O95758 552 aaKnown RBP13.15□□□□□ -0.3
CARMIL3-201ENST00000342740 UNQ5815/PRO19632Q6UWF5 114 aa13.15□□□□□ -0.3
CARMIL3-201ENST00000342740 C5orf17Q8NAS9 161 aa13.15□□□□□ -0.3
CARMIL3-201ENST00000342740 PLSCR4Q9NRQ2 329 aa13.15□□□□□ -0.3
CARMIL3-201ENST00000342740 ABCA1O95477 2261 aa13.15□□□□□ -0.3
CARMIL3-201ENST00000342740 OR2J3O76001 311 aa13.15□□□□□ -0.31
CARMIL3-201ENST00000342740 COMPP49747 757 aaPredicted RBP13.15□□□□□ -0.31
CARMIL3-201ENST00000342740 HIST3H3Q16695 136 aa13.15□□□□□ -0.31
CARMIL3-201ENST00000342740 FUT9Q9Y231 359 aa13.15□□□□□ -0.31
CARMIL3-201ENST00000342740 ORM1P02763 201 aa13.14□□□□□ -0.31
CARMIL3-201ENST00000342740 AMTP48728 403 aa13.14□□□□□ -0.31
CARMIL3-201ENST00000342740 RARRES2Q99969 163 aa13.14□□□□□ -0.31
CARMIL3-201ENST00000342740 HIST1H1EP10412 219 aaKnown RBP13.14□□□□□ -0.31
CARMIL3-201ENST00000342740 NAT1P18440 290 aa13.14□□□□□ -0.31
CARMIL3-201ENST00000342740 FAM166AQ6J272 317 aa13.14□□□□□ -0.31
CARMIL3-201ENST00000342740 OSR1Q8TAX0 266 aaPredicted RBP13.14□□□□□ -0.31
CARMIL3-201ENST00000342740 DNAJC4Q9NNZ3 241 aa13.14□□□□□ -0.31
CARMIL3-201ENST00000342740 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.14□□□□□ -0.31
CARMIL3-201ENST00000342740 LDLRAD4O15165 306 aa13.14□□□□□ -0.31
CARMIL3-201ENST00000342740 IQCJQ1A5X6 159 aa13.14□□□□□ -0.31
CARMIL3-201ENST00000342740 LY6G6FQ5SQ64 297 aa13.14□□□□□ -0.31
CARMIL3-201ENST00000342740 RNASE6Q93091 150 aaKnown RBP13.14□□□□□ -0.31
CARMIL3-201ENST00000342740 FAM122AQ96E09 287 aa13.14□□□□□ -0.31
CARMIL3-201ENST00000342740 IGKV1-27A0A075B6S5 117 aa13.13□□□□□ -0.31
CARMIL3-201ENST00000342740 TFF1P04155 84 aa13.13□□□□□ -0.31
CARMIL3-201ENST00000342740 TIMP3P35625 211 aa13.13□□□□□ -0.31
CARMIL3-201ENST00000342740 MEF2CQ06413 473 aaPredicted RBP13.13□□□□□ -0.31
CARMIL3-201ENST00000342740 KLHDC1Q8N7A1 406 aa13.13□□□□□ -0.31
CARMIL3-201ENST00000342740 NPIPB3Q92617 1050 aa13.13□□□□□ -0.31
CARMIL3-201ENST00000342740 RBM14Q96PK6 669 aaKnown RBP13.13□□□□□ -0.31
CARMIL3-201ENST00000342740 GBF1Q92538 1859 aa13.13□□□□□ -0.31
CARMIL3-201ENST00000342740 F5H697 171 aa13.13□□□□□ -0.31
CARMIL3-201ENST00000342740 SLC16A13Q7RTY0 426 aa13.13□□□□□ -0.31
CARMIL3-201ENST00000342740 LHFPL5Q8TAF8 219 aa13.13□□□□□ -0.31
CARMIL3-201ENST00000342740 PIMREGQ9BSJ6 248 aa13.13□□□□□ -0.31
CARMIL3-201ENST00000342740 TMEM56-RWDD3S4R434 201 aa13.13□□□□□ -0.31
CARMIL3-201ENST00000342740 IER3P46695 156 aa13.13□□□□□ -0.31
CARMIL3-201ENST00000342740 SNRNP40Q96DI7 357 aaKnown RBP13.13□□□□□ -0.31
CARMIL3-201ENST00000342740 TMEM208Q9BTX3 173 aa13.13□□□□□ -0.31
CARMIL3-201ENST00000342740 PF4V1P10720 104 aa13.13□□□□□ -0.31
CARMIL3-201ENST00000342740 ZNF497Q6ZNH5 498 aa13.13□□□□□ -0.31
CARMIL3-201ENST00000342740 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.13□□□□□ -0.31
CARMIL3-201ENST00000342740 PSMG3Q9BT73 122 aaPredicted RBP13.13□□□□□ -0.31
CARMIL3-201ENST00000342740 RABAC1Q9UI14 185 aa13.13□□□□□ -0.31
CARMIL3-201ENST00000342740 E9PLN8 166 aa13.12□□□□□ -0.31
CARMIL3-201ENST00000342740 J3KRW8 73 aa13.12□□□□□ -0.31
CARMIL3-201ENST00000342740 CSN3P07498 182 aa13.12□□□□□ -0.31
CARMIL3-201ENST00000342740 HIST1H1BP16401 226 aaKnown RBP13.12□□□□□ -0.31
CARMIL3-201ENST00000342740 FCER1GP30273 86 aa13.12□□□□□ -0.31
CARMIL3-201ENST00000342740 PPOXP50336 477 aa13.12□□□□□ -0.31
CARMIL3-201ENST00000342740 PCSK4Q6UW60 755 aa13.12□□□□□ -0.31
CARMIL3-201ENST00000342740 VKORC1Q9BQB6 163 aa13.12□□□□□ -0.31
CARMIL3-201ENST00000342740 LINC00312Q9Y6C7 94 aa13.12□□□□□ -0.31
CARMIL3-201ENST00000342740 TRBV23-1A0A0A0MS06 115 aa13.12□□□□□ -0.31
CARMIL3-201ENST00000342740 CA2P00918 260 aa13.12□□□□□ -0.31
CARMIL3-201ENST00000342740 C8orf88P0DMB2 117 aa13.12□□□□□ -0.31
CARMIL3-201ENST00000342740 PDLIM4P50479 330 aa13.12□□□□□ -0.31
CARMIL3-201ENST00000342740 HELZP42694 1942 aaKnown RBP13.12□□□□□ -0.31
CARMIL3-201ENST00000342740 SNURFLB1AK76 121 aa13.12□□□□□ -0.31
CARMIL3-201ENST00000342740 FOXH1O75593 365 aa13.12□□□□□ -0.31
CARMIL3-201ENST00000342740 CCL3L1P16619 93 aa13.12□□□□□ -0.31
CARMIL3-201ENST00000342740 MPZP25189 248 aa13.12□□□□□ -0.31
CARMIL3-201ENST00000342740 ATP5IP56385 69 aaPredicted RBP13.12□□□□□ -0.31
CARMIL3-201ENST00000342740 LOXL3P58215 753 aa13.12□□□□□ -0.31
CARMIL3-201ENST00000342740 RNF144BQ7Z419 303 aa13.12□□□□□ -0.31
CARMIL3-201ENST00000342740 BPIFA4PQ86YQ2 179 aa13.12□□□□□ -0.31
CARMIL3-201ENST00000342740 PGPA6NDG6 321 aa13.12□□□□□ -0.31
CARMIL3-201ENST00000342740 NEU4Q8WWR8 484 aaPredicted RBP13.12□□□□□ -0.31
CARMIL3-201ENST00000342740 VAMP8Q9BV40 100 aa13.12□□□□□ -0.31
CARMIL3-201ENST00000342740 RNF126Q9BV68 326 aa13.12□□□□□ -0.31
CARMIL3-201ENST00000342740 CHODLQ9H9P2 273 aa13.12□□□□□ -0.31
CARMIL3-201ENST00000342740 DPM3Q9P2X0 92 aa13.12□□□□□ -0.31
CARMIL3-201ENST00000342740 SH2D7A6NKC9 451 aaPredicted RBP13.11□□□□□ -0.31
CARMIL3-201ENST00000342740 OTX1P32242 354 aaPredicted RBP13.11□□□□□ -0.31
CARMIL3-201ENST00000342740 ZNF273Q14593 569 aa13.11□□□□□ -0.31
CARMIL3-201ENST00000342740 OR4A47Q6IF82 309 aa13.11□□□□□ -0.31
CARMIL3-201ENST00000342740 NABP2Q9BQ15 211 aa13.11□□□□□ -0.31
CARMIL3-201ENST00000342740 YTHDF2Q9Y5A9 579 aaKnown RBP13.11□□□□□ -0.31
CARMIL3-201ENST00000342740 TMSB15BA0A087X1C1 80 aa13.11□□□□□ -0.31
CARMIL3-201ENST00000342740 ARL14EPLP0DKL9 152 aa13.11□□□□□ -0.31
CARMIL3-201ENST00000342740 MFAP4P55083 255 aa13.11□□□□□ -0.31
CARMIL3-201ENST00000342740 FXYD3Q14802 87 aa13.11□□□□□ -0.31
CARMIL3-201ENST00000342740 LRP11Q86VZ4 500 aa13.11□□□□□ -0.31
CARMIL3-201ENST00000342740 WDR31Q8NA23 367 aa13.11□□□□□ -0.31
CARMIL3-201ENST00000342740 OR2D3Q8NGH3 330 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms