RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 TMEM250H0YL14 139 aa10.48□□□□□ -0.73
SNRNP48-201ENST00000342415 M0R2Z0 102 aa10.48□□□□□ -0.73
SNRNP48-201ENST00000342415 IGKV1-5P01602 117 aa10.48□□□□□ -0.73
SNRNP48-201ENST00000342415 MOB3BQ86TA1 216 aa10.48□□□□□ -0.73
SNRNP48-201ENST00000342415 ZNF703Q9H7S9 590 aaPredicted RBP10.48□□□□□ -0.73
SNRNP48-201ENST00000342415 OR6C3Q9NZP0 311 aa10.48□□□□□ -0.73
SNRNP48-201ENST00000342415 TRAV17A0A0B4J275 112 aa10.47□□□□□ -0.73
SNRNP48-201ENST00000342415 IGKV1-6A0A0C4DH72 117 aa10.47□□□□□ -0.73
SNRNP48-201ENST00000342415 GCGP01275 180 aa10.47□□□□□ -0.73
SNRNP48-201ENST00000342415 RBP4P02753 201 aa10.47□□□□□ -0.73
SNRNP48-201ENST00000342415 DTX1Q86Y01 620 aa10.47□□□□□ -0.73
SNRNP48-201ENST00000342415 SFRP2Q96HF1 295 aa10.47□□□□□ -0.73
SNRNP48-201ENST00000342415 HARBI1Q96MB7 349 aa10.47□□□□□ -0.73
SNRNP48-201ENST00000342415 PKIBQ9C010 78 aa10.47□□□□□ -0.73
SNRNP48-201ENST00000342415 KIF26AQ9ULI4 1882 aaPredicted RBP10.47□□□□□ -0.73
SNRNP48-201ENST00000342415 TICRRQ7Z2Z1 1910 aa10.47□□□□□ -0.73
SNRNP48-201ENST00000342415 A0A1B0GUS0 222 aa10.47□□□□□ -0.73
SNRNP48-201ENST00000342415 SLC31A2O15432 143 aa10.47□□□□□ -0.73
SNRNP48-201ENST00000342415 NEURL1O76050 574 aa10.47□□□□□ -0.73
SNRNP48-201ENST00000342415 HPRT1P00492 218 aa10.47□□□□□ -0.73
SNRNP48-201ENST00000342415 CYC1P08574 325 aa10.47□□□□□ -0.73
SNRNP48-201ENST00000342415 SAXO1Q8IYX7 474 aa10.47□□□□□ -0.73
SNRNP48-201ENST00000342415 KLHDC1Q8N7A1 406 aa10.47□□□□□ -0.73
SNRNP48-201ENST00000342415 ZBTB34Q8NCN2 500 aa10.47□□□□□ -0.73
SNRNP48-201ENST00000342415 CRIM1Q9NZV1 1036 aa10.47□□□□□ -0.73
SNRNP48-201ENST00000342415 TCF19Q9Y242 345 aa10.47□□□□□ -0.73
SNRNP48-201ENST00000342415 AMBPP02760 352 aa10.47□□□□□ -0.73
SNRNP48-201ENST00000342415 ZNF324BQ6AW86 544 aaPredicted RBP10.47□□□□□ -0.73
SNRNP48-201ENST00000342415 FAM214BQ7L5A3 538 aa10.47□□□□□ -0.73
SNRNP48-201ENST00000342415 FAM122AQ96E09 287 aa10.47□□□□□ -0.73
SNRNP48-201ENST00000342415 WNT10AQ9GZT5 417 aa10.47□□□□□ -0.73
SNRNP48-201ENST00000342415 CGAP01215 116 aa10.47□□□□□ -0.73
SNRNP48-201ENST00000342415 ADH4P08319 380 aa10.47□□□□□ -0.73
SNRNP48-201ENST00000342415 HINT1P49773 126 aaPredicted RBP10.47□□□□□ -0.73
SNRNP48-201ENST00000342415 C1QL4Q86Z23 238 aa10.47□□□□□ -0.73
SNRNP48-201ENST00000342415 FLYWCH2Q96CP2 140 aaKnown RBP10.47□□□□□ -0.73
SNRNP48-201ENST00000342415 FAM208BQ5VWN6 2430 aa10.46□□□□□ -0.73
SNRNP48-201ENST00000342415 PRRG2O14669 202 aa10.46□□□□□ -0.73
SNRNP48-201ENST00000342415 PSPNO60542 156 aa10.46□□□□□ -0.73
SNRNP48-201ENST00000342415 BPIFB3P59826 476 aa10.46□□□□□ -0.73
SNRNP48-201ENST00000342415 OR1L4Q8NGR5 311 aa10.46□□□□□ -0.73
SNRNP48-201ENST00000342415 ITLN1Q8WWA0 313 aa10.46□□□□□ -0.73
SNRNP48-201ENST00000342415 OR51B2Q9Y5P1 312 aa10.46□□□□□ -0.73
SNRNP48-201ENST00000342415 ZGRF1Q86YA3 2104 aa10.46□□□□□ -0.73
SNRNP48-201ENST00000342415 COX7A1P24310 79 aa10.46□□□□□ -0.74
SNRNP48-201ENST00000342415 SRIP30626 198 aa10.46□□□□□ -0.74
SNRNP48-201ENST00000342415 SPCS3P61009 180 aa10.46□□□□□ -0.74
SNRNP48-201ENST00000342415 RPL30P62888 115 aaKnown RBP10.46□□□□□ -0.74
SNRNP48-201ENST00000342415 IL15RAQ13261 267 aa10.46□□□□□ -0.74
SNRNP48-201ENST00000342415 FAM19A2Q8N3H0 131 aa10.46□□□□□ -0.74
SNRNP48-201ENST00000342415 MUC6Q6W4X9 2439 aa10.46□□□□□ -0.74
SNRNP48-201ENST00000342415 RPLP1P05386 114 aaKnown RBP10.46□□□□□ -0.74
SNRNP48-201ENST00000342415 IL3RAP26951 378 aa10.46□□□□□ -0.74
SNRNP48-201ENST00000342415 NUBP1P53384 320 aa10.46□□□□□ -0.74
SNRNP48-201ENST00000342415 CTAG1AP78358 180 aa10.46□□□□□ -0.74
SNRNP48-201ENST00000342415 HCP5Q6MZN7 132 aa10.46□□□□□ -0.74
SNRNP48-201ENST00000342415 EGLN1Q9GZT9 426 aa10.46□□□□□ -0.74
SNRNP48-201ENST00000342415 SRP14P37108 136 aaKnown RBP10.45□□□□□ -0.74
SNRNP48-201ENST00000342415 C10orf91Q5T1B1 145 aa10.45□□□□□ -0.74
SNRNP48-201ENST00000342415 ETFRF1Q6IPR1 90 aa10.45□□□□□ -0.74
SNRNP48-201ENST00000342415 MMD2Q8IY49 270 aa10.45□□□□□ -0.74
SNRNP48-201ENST00000342415 TMEM256Q8N2U0 113 aa10.45□□□□□ -0.74
SNRNP48-201ENST00000342415 OR8G5Q8NG78 346 aa10.45□□□□□ -0.74
SNRNP48-201ENST00000342415 OR4C5Q8NGB2 326 aa10.45□□□□□ -0.74
SNRNP48-201ENST00000342415 MS4A5Q9H3V2 200 aa10.45□□□□□ -0.74
SNRNP48-201ENST00000342415 LOC102723996A0A087X1L8 192 aa10.45□□□□□ -0.74
SNRNP48-201ENST00000342415 M0R296 226 aa10.45□□□□□ -0.74
SNRNP48-201ENST00000342415 RAB29O14966 203 aa10.45□□□□□ -0.74
SNRNP48-201ENST00000342415 REG1AP05451 166 aa10.45□□□□□ -0.74
SNRNP48-201ENST00000342415 RAB7AP51149 207 aa10.45□□□□□ -0.74
SNRNP48-201ENST00000342415 VWA1Q6PCB0 445 aa10.45□□□□□ -0.74
SNRNP48-201ENST00000342415 INO80CQ6PI98 192 aaPredicted RBP10.45□□□□□ -0.74
SNRNP48-201ENST00000342415 GMPPAQ96IJ6 420 aaPredicted RBP10.45□□□□□ -0.74
SNRNP48-201ENST00000342415 IL19Q9UHD0 177 aa10.45□□□□□ -0.74
SNRNP48-201ENST00000342415 RNF24Q9Y225 148 aa10.45□□□□□ -0.74
SNRNP48-201ENST00000342415 GOLT1BQ9Y3E0 138 aa10.45□□□□□ -0.74
SNRNP48-201ENST00000342415 YLPM1P49750 1951 aaKnown RBP10.45□□□□□ -0.74
SNRNP48-201ENST00000342415 ZNF891A8MT65 544 aaPredicted RBP10.45□□□□□ -0.74
SNRNP48-201ENST00000342415 FAM157AC9JC47 383 aa10.45□□□□□ -0.74
SNRNP48-201ENST00000342415 BRS3P32247 399 aa10.45□□□□□ -0.74
SNRNP48-201ENST00000342415 LHX2P50458 406 aa10.45□□□□□ -0.74
SNRNP48-201ENST00000342415 LYPD6Q86Y78 171 aa10.45□□□□□ -0.74
SNRNP48-201ENST00000342415 WDYHV1Q96HA8 205 aa10.45□□□□□ -0.74
SNRNP48-201ENST00000342415 TMEM167BQ9NRX6 74 aa10.45□□□□□ -0.74
SNRNP48-201ENST00000342415 B4E171 279 aa10.44□□□□□ -0.74
SNRNP48-201ENST00000342415 FAM90A26D6RGX4 464 aa10.44□□□□□ -0.74
SNRNP48-201ENST00000342415 HOXB1P14653 301 aaPredicted RBP10.44□□□□□ -0.74
SNRNP48-201ENST00000342415 TSPAN7P41732 249 aa10.44□□□□□ -0.74
SNRNP48-201ENST00000342415 Q0VFX4 171 aa10.44□□□□□ -0.74
SNRNP48-201ENST00000342415 IBA57Q5T440 356 aaKnown RBP10.44□□□□□ -0.74
SNRNP48-201ENST00000342415 FAM90A2PQ658T7 463 aa10.44□□□□□ -0.74
SNRNP48-201ENST00000342415 C11orf42Q8N5U0 333 aa10.44□□□□□ -0.74
SNRNP48-201ENST00000342415 TCTEX1D1Q8N7M0 179 aa10.44□□□□□ -0.74
SNRNP48-201ENST00000342415 STPG3Q8N7X2 389 aa10.44□□□□□ -0.74
SNRNP48-201ENST00000342415 ARFGEF3Q5TH69 2177 aa10.44□□□□□ -0.74
SNRNP48-201ENST00000342415 MED13Q9UHV7 2174 aa10.44□□□□□ -0.74
SNRNP48-201ENST00000342415 TMSB15BA0A087X1C1 80 aa10.44□□□□□ -0.74
SNRNP48-201ENST00000342415 TRGV8A0A0C4DH27 118 aa10.44□□□□□ -0.74
SNRNP48-201ENST00000342415 K7ESF4 209 aa10.44□□□□□ -0.74
SNRNP48-201ENST00000342415 LYZP61626 148 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms