RNA–Protein interactions for RNA: ENST00000342409.3

FRMD4A-202, Transcript of FERM domain containing 4A, humanhuman

TSL 2

Gene FRMD4A, Length 1,741 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRMD4A-202ENST00000342409 OR52E5Q8NH55 327 aa13.86□□□□□ -0.19
FRMD4A-202ENST00000342409 DTD1Q8TEA8 209 aa13.86□□□□□ -0.19
FRMD4A-202ENST00000342409 TMED6Q8WW62 240 aa13.86□□□□□ -0.19
FRMD4A-202ENST00000342409 LHX4Q969G2 390 aa13.86□□□□□ -0.19
FRMD4A-202ENST00000342409 PIMREGQ9BSJ6 248 aa13.86□□□□□ -0.19
FRMD4A-202ENST00000342409 BARX1Q9HBU1 254 aaPredicted RBP13.86□□□□□ -0.19
FRMD4A-202ENST00000342409 KPTNQ9Y664 436 aa13.86□□□□□ -0.19
FRMD4A-202ENST00000342409 NAV3Q8IVL0 2385 aa13.85□□□□□ -0.19
FRMD4A-202ENST00000342409 IGHV3-72A0A0B4J1Y9 119 aa13.85□□□□□ -0.19
FRMD4A-202ENST00000342409 IGHV1-3A0A0C4DH29 117 aa13.85□□□□□ -0.19
FRMD4A-202ENST00000342409 RNASEK-C17orf49H0YIS7 233 aa13.85□□□□□ -0.19
FRMD4A-202ENST00000342409 NDUFS8O00217 210 aa13.85□□□□□ -0.19
FRMD4A-202ENST00000342409 UPK2O00526 184 aa13.85□□□□□ -0.19
FRMD4A-202ENST00000342409 RBMXL2O75526 392 aaKnown RBP13.85□□□□□ -0.19
FRMD4A-202ENST00000342409 JTBO76095 146 aa13.85□□□□□ -0.19
FRMD4A-202ENST00000342409 METTL15P1P0C7V9 234 aa13.85□□□□□ -0.19
FRMD4A-202ENST00000342409 HOXB4P17483 251 aaPredicted RBP13.85□□□□□ -0.19
FRMD4A-202ENST00000342409 VDAC2P45880 294 aaPredicted RBP13.85□□□□□ -0.19
FRMD4A-202ENST00000342409 SULT1A1P50225 295 aa13.85□□□□□ -0.19
FRMD4A-202ENST00000342409 CLINT1Q14677 625 aa13.85□□□□□ -0.19
FRMD4A-202ENST00000342409 SPANXN5Q5MJ07 72 aa13.85□□□□□ -0.19
FRMD4A-202ENST00000342409 TMEM217Q8N7C4 229 aa13.85□□□□□ -0.19
FRMD4A-202ENST00000342409 FOXA2Q9Y261 457 aaPredicted RBP13.85□□□□□ -0.19
FRMD4A-202ENST00000342409 POLR3KQ9Y2Y1 108 aaPredicted RBP13.85□□□□□ -0.19
FRMD4A-202ENST00000342409 WASHC3Q9Y3C0 194 aa13.85□□□□□ -0.19
FRMD4A-202ENST00000342409 A0A1W2PPI3 338 aa13.84□□□□□ -0.19
FRMD4A-202ENST00000342409 SHOXO15266 292 aa13.84□□□□□ -0.19
FRMD4A-202ENST00000342409 ARG1P05089 322 aa13.84□□□□□ -0.19
FRMD4A-202ENST00000342409 SPCS3P61009 180 aa13.84□□□□□ -0.19
FRMD4A-202ENST00000342409 FLYWCH2Q96CP2 140 aaKnown RBP13.84□□□□□ -0.19
FRMD4A-202ENST00000342409 CXorf58Q96LI9 332 aa13.84□□□□□ -0.19
FRMD4A-202ENST00000342409 HARBI1Q96MB7 349 aa13.84□□□□□ -0.19
FRMD4A-202ENST00000342409 GINS3Q9BRX5 216 aa13.84□□□□□ -0.19
FRMD4A-202ENST00000342409 BET1LQ9NYM9 111 aa13.84□□□□□ -0.19
FRMD4A-202ENST00000342409 TCF19Q9Y242 345 aa13.84□□□□□ -0.19
FRMD4A-202ENST00000342409 AMMECR1Q9Y4X0 333 aaPredicted RBP13.84□□□□□ -0.19
FRMD4A-202ENST00000342409 AUP1Q9Y679 476 aa13.84□□□□□ -0.19
FRMD4A-202ENST00000342409 PMS2P5A8MQ11 134 aa13.84□□□□□ -0.19
FRMD4A-202ENST00000342409 CEBPZOSA8MTT3 80 aa13.84□□□□□ -0.19
FRMD4A-202ENST00000342409 J3QKU1 62 aa13.84□□□□□ -0.19
FRMD4A-202ENST00000342409 FAM157CP0CG43 387 aa13.84□□□□□ -0.19
FRMD4A-202ENST00000342409 MRGPRG-AS1Q2M3A8 158 aa13.84□□□□□ -0.19
FRMD4A-202ENST00000342409 TPTE2P1Q5T6R2 138 aa13.84□□□□□ -0.19
FRMD4A-202ENST00000342409 ZNF787Q6DD87 383 aa13.84□□□□□ -0.19
FRMD4A-202ENST00000342409 CLEC2AQ6UVW9 174 aa13.84□□□□□ -0.19
FRMD4A-202ENST00000342409 LHFPL4Q7Z7J7 247 aa13.84□□□□□ -0.19
FRMD4A-202ENST00000342409 STPG2Q8N412 459 aa13.84□□□□□ -0.19
FRMD4A-202ENST00000342409 OR4C13Q8NGP0 309 aa13.84□□□□□ -0.19
FRMD4A-202ENST00000342409 TBX15Q96SF7 602 aa13.84□□□□□ -0.19
FRMD4A-202ENST00000342409 SLC25A32Q9H2D1 315 aa13.84□□□□□ -0.19
FRMD4A-202ENST00000342409 SVEP1Q4LDE5 3571 aa13.83□□□□□ -0.2
FRMD4A-202ENST00000342409 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.83□□□□□ -0.2
FRMD4A-202ENST00000342409 FGF16O43320 207 aa13.83□□□□□ -0.2
FRMD4A-202ENST00000342409 IFNA17P01571 189 aa13.83□□□□□ -0.2
FRMD4A-202ENST00000342409 MC5RP33032 325 aa13.83□□□□□ -0.2
FRMD4A-202ENST00000342409 PDZD9Q8IXQ8 264 aa13.83□□□□□ -0.2
FRMD4A-202ENST00000342409 MS4A7Q9GZW8 240 aaPredicted RBP13.83□□□□□ -0.2
FRMD4A-202ENST00000342409 RFNGQ9Y644 331 aa13.83□□□□□ -0.2
FRMD4A-202ENST00000342409 A0A1W2PRD5 423 aa13.82□□□□□ -0.2
FRMD4A-202ENST00000342409 A0A1W2PRF3 423 aa13.82□□□□□ -0.2
FRMD4A-202ENST00000342409 A0A1W2PRM7 423 aa13.82□□□□□ -0.2
FRMD4A-202ENST00000342409 C15orf62A8K5M9 175 aa13.82□□□□□ -0.2
FRMD4A-202ENST00000342409 FOXH1O75593 365 aa13.82□□□□□ -0.2
FRMD4A-202ENST00000342409 CR1P17927 2039 aa13.82□□□□□ -0.2
FRMD4A-202ENST00000342409 PAX6P26367 422 aa13.82□□□□□ -0.2
FRMD4A-202ENST00000342409 RAB14P61106 215 aa13.82□□□□□ -0.2
FRMD4A-202ENST00000342409 HSPE1P61604 102 aaKnown RBP13.82□□□□□ -0.2
FRMD4A-202ENST00000342409 RPS16P62249 146 aaKnown RBP13.82□□□□□ -0.2
FRMD4A-202ENST00000342409 EIF5AP63241 154 aaKnown RBP13.82□□□□□ -0.2
FRMD4A-202ENST00000342409 STX12Q86Y82 276 aa13.82□□□□□ -0.2
FRMD4A-202ENST00000342409 TMEM170AQ8WVE7 144 aa13.82□□□□□ -0.2
FRMD4A-202ENST00000342409 RPEQ96AT9 228 aa13.82□□□□□ -0.2
FRMD4A-202ENST00000342409 DPM3Q9P2X0 92 aa13.82□□□□□ -0.2
FRMD4A-202ENST00000342409 INSIG2Q9Y5U4 225 aa13.82□□□□□ -0.2
FRMD4A-202ENST00000342409 FBXO24O75426 580 aa13.81□□□□□ -0.2
FRMD4A-202ENST00000342409 KBTBD11O94819 623 aa13.81□□□□□ -0.2
FRMD4A-202ENST00000342409 HTR1DP28221 377 aa13.81□□□□□ -0.2
FRMD4A-202ENST00000342409 RAB13P51153 203 aa13.81□□□□□ -0.2
FRMD4A-202ENST00000342409 DVL1P1P54792 670 aaPredicted RBP13.81□□□□□ -0.2
FRMD4A-202ENST00000342409 MOB3BQ86TA1 216 aa13.81□□□□□ -0.2
FRMD4A-202ENST00000342409 DYNAPQ8N1N2 210 aa13.81□□□□□ -0.2
FRMD4A-202ENST00000342409 OR1S2Q8NGQ3 325 aa13.81□□□□□ -0.2
FRMD4A-202ENST00000342409 CFHR4Q92496 578 aa13.81□□□□□ -0.2
FRMD4A-202ENST00000342409 CIB3Q96Q77 187 aaPredicted RBP13.81□□□□□ -0.2
FRMD4A-202ENST00000342409 SH3BGRL3Q9H299 93 aa13.81□□□□□ -0.2
FRMD4A-202ENST00000342409 LPAR2Q9HBW0 351 aa13.81□□□□□ -0.2
FRMD4A-202ENST00000342409 TPSG1Q9NRR2 321 aa13.81□□□□□ -0.2
FRMD4A-202ENST00000342409 OR51B2Q9Y5P1 312 aa13.81□□□□□ -0.2
FRMD4A-202ENST00000342409 CELSR1Q9NYQ6 3014 aa13.81□□□□□ -0.2
FRMD4A-202ENST00000342409 BORCS7-ASMTA0A0B4J1R7 106 aa13.81□□□□□ -0.2
FRMD4A-202ENST00000342409 LEUTXA8MZ59 168 aa13.81□□□□□ -0.2
FRMD4A-202ENST00000342409 CNTFRP26992 372 aa13.81□□□□□ -0.2
FRMD4A-202ENST00000342409 THNSL2Q86YJ6 484 aa13.81□□□□□ -0.2
FRMD4A-202ENST00000342409 TMEM167AQ8TBQ9 72 aa13.81□□□□□ -0.2
FRMD4A-202ENST00000342409 C17orf50Q8WW18 174 aa13.81□□□□□ -0.2
FRMD4A-202ENST00000342409 AJUBAQ96IF1 538 aa13.81□□□□□ -0.2
FRMD4A-202ENST00000342409 ATP5SQ99766 215 aa13.81□□□□□ -0.2
FRMD4A-202ENST00000342409 ITGB1BP2Q9UKP3 347 aa13.81□□□□□ -0.2
FRMD4A-202ENST00000342409 NUP50Q9UKX7 468 aa13.81□□□□□ -0.2
FRMD4A-202ENST00000342409 PRNDQ9UKY0 176 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms