RNA–Protein interactions for RNA: ENST00000342220.9

COL18A1-201, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-201ENST00000342220 TMEM217Q8N7C4 229 aa10.88□□□□□ -0.67
COL18A1-201ENST00000342220 OR2D2Q9H210 308 aa10.88□□□□□ -0.67
COL18A1-201ENST00000342220 GCM1Q9NP62 436 aa10.88□□□□□ -0.67
COL18A1-201ENST00000342220 ZNRD1Q9P1U0 126 aa10.88□□□□□ -0.67
COL18A1-201ENST00000342220 TMEM30CPA0ZSE6 113 aa10.88□□□□□ -0.67
COL18A1-201ENST00000342220 IFNL4K9M1U5 179 aa10.88□□□□□ -0.67
COL18A1-201ENST00000342220 BRS3P32247 399 aa10.88□□□□□ -0.67
COL18A1-201ENST00000342220 IQCJQ1A5X6 159 aa10.88□□□□□ -0.67
COL18A1-201ENST00000342220 Q8IYB0 196 aa10.88□□□□□ -0.67
COL18A1-201ENST00000342220 TMEM252Q8N6L7 170 aa10.88□□□□□ -0.67
COL18A1-201ENST00000342220 GALMQ96C23 342 aa10.88□□□□□ -0.67
COL18A1-201ENST00000342220 VPS25Q9BRG1 176 aa10.88□□□□□ -0.67
COL18A1-201ENST00000342220 RNF7Q9UBF6 113 aa10.88□□□□□ -0.67
COL18A1-201ENST00000342220 ZNF705FA8MVS1 300 aaPredicted RBP10.88□□□□□ -0.67
COL18A1-201ENST00000342220 HBZP02008 142 aa10.88□□□□□ -0.67
COL18A1-201ENST00000342220 ZNF705DP0CH99 300 aaPredicted RBP10.88□□□□□ -0.67
COL18A1-201ENST00000342220 ZNF705BP0CI00 300 aaPredicted RBP10.88□□□□□ -0.67
COL18A1-201ENST00000342220 CDKN1AP38936 164 aa10.88□□□□□ -0.67
COL18A1-201ENST00000342220 PMS2P11Q13670 270 aa10.88□□□□□ -0.67
COL18A1-201ENST00000342220 MUC15Q8N387 334 aa10.88□□□□□ -0.67
COL18A1-201ENST00000342220 OR5C1Q8NGR4 320 aa10.88□□□□□ -0.67
COL18A1-201ENST00000342220 CHTOPQ9Y3Y2 248 aaKnown RBP10.88□□□□□ -0.67
COL18A1-201ENST00000342220 TMEM50AO95807 157 aa10.87□□□□□ -0.67
COL18A1-201ENST00000342220 KRASP01116 189 aa10.87□□□□□ -0.67
COL18A1-201ENST00000342220 VAMP2P63027 116 aa10.87□□□□□ -0.67
COL18A1-201ENST00000342220 Q6P435 159 aa10.87□□□□□ -0.67
COL18A1-201ENST00000342220 ODF3L1Q8IXM7 274 aa10.87□□□□□ -0.67
COL18A1-201ENST00000342220 C1orf87Q8N0U7 546 aa10.87□□□□□ -0.67
COL18A1-201ENST00000342220 TMEM56Q96MV1 263 aa10.87□□□□□ -0.67
COL18A1-201ENST00000342220 HINT2Q9BX68 163 aa10.87□□□□□ -0.67
COL18A1-201ENST00000342220 ELOVL5Q9NYP7 299 aa10.87□□□□□ -0.67
COL18A1-201ENST00000342220 TMEM56-RWDD3S4R434 201 aa10.87□□□□□ -0.67
COL18A1-201ENST00000342220 TMEM238LA0A1B0GVL6 79 aa10.87□□□□□ -0.67
COL18A1-201ENST00000342220 C12orf77C9JDV5 145 aa10.87□□□□□ -0.67
COL18A1-201ENST00000342220 KITLGP21583 273 aa10.87□□□□□ -0.67
COL18A1-201ENST00000342220 S100GP29377 79 aa10.87□□□□□ -0.67
COL18A1-201ENST00000342220 DYNLT3P51808 116 aa10.87□□□□□ -0.67
COL18A1-201ENST00000342220 SRPXP78539 464 aa10.87□□□□□ -0.67
COL18A1-201ENST00000342220 HLA-DRB3P79483 266 aa10.87□□□□□ -0.67
COL18A1-201ENST00000342220 RUNX1Q01196 453 aa10.87□□□□□ -0.67
COL18A1-201ENST00000342220 ZNF266Q14584 549 aa10.87□□□□□ -0.67
COL18A1-201ENST00000342220 SPSB3Q6PJ21 355 aa10.87□□□□□ -0.67
COL18A1-201ENST00000342220 FAM90A1Q86YD7 464 aa10.87□□□□□ -0.67
COL18A1-201ENST00000342220 OR1L6Q8NGR2 347 aa10.87□□□□□ -0.67
COL18A1-201ENST00000342220 OR1P1Q8NH06 330 aa10.87□□□□□ -0.67
COL18A1-201ENST00000342220 RNASEH2CQ8TDP1 164 aaKnown RBP10.87□□□□□ -0.67
COL18A1-201ENST00000342220 PLEKHF2Q9H8W4 249 aa10.87□□□□□ -0.67
COL18A1-201ENST00000342220 XKRY2A2RUG3 117 aa10.86□□□□□ -0.67
COL18A1-201ENST00000342220 CIDEAO60543 219 aa10.86□□□□□ -0.67
COL18A1-201ENST00000342220 PITX3O75364 302 aa10.86□□□□□ -0.67
COL18A1-201ENST00000342220 HAGHQ16775 308 aa10.86□□□□□ -0.67
COL18A1-201ENST00000342220 ST6GALNAC3Q8NDV1 305 aa10.86□□□□□ -0.67
COL18A1-201ENST00000342220 LFNGQ8NES3 379 aa10.86□□□□□ -0.67
COL18A1-201ENST00000342220 LYRM2Q9NU23 88 aaPredicted RBP10.86□□□□□ -0.67
COL18A1-201ENST00000342220 RNF115Q9Y4L5 304 aa10.86□□□□□ -0.67
COL18A1-201ENST00000342220 SETD2Q9BYW2 2564 aaPredicted RBP10.86□□□□□ -0.67
COL18A1-201ENST00000342220 IGKV1D-17A0A075B6S4 117 aa10.86□□□□□ -0.67
COL18A1-201ENST00000342220 RBFOX3A6NFN3 312 aa10.86□□□□□ -0.67
COL18A1-201ENST00000342220 REG1BP48304 166 aa10.86□□□□□ -0.67
COL18A1-201ENST00000342220 SLC35E3Q7Z769 313 aa10.86□□□□□ -0.67
COL18A1-201ENST00000342220 ZNF429Q86V71 674 aa10.86□□□□□ -0.67
COL18A1-201ENST00000342220 LRRC30A6NM36 301 aa10.86□□□□□ -0.67
COL18A1-201ENST00000342220 NDUFS7O75251 213 aa10.86□□□□□ -0.67
COL18A1-201ENST00000342220 MZT1Q08AG7 82 aa10.86□□□□□ -0.67
COL18A1-201ENST00000342220 MBNL2Q5VZF2 373 aaKnown RBP10.86□□□□□ -0.67
COL18A1-201ENST00000342220 SMIM15Q7Z3B0 74 aa10.86□□□□□ -0.67
COL18A1-201ENST00000342220 SPIN2AQ99865 258 aa10.86□□□□□ -0.67
COL18A1-201ENST00000342220 SPIN2BQ9BPZ2 258 aa10.86□□□□□ -0.67
COL18A1-201ENST00000342220 DOPEY1Q5JWR5 2465 aa10.86□□□□□ -0.67
COL18A1-201ENST00000342220 C17orf100A8MU93 164 aa10.85□□□□□ -0.67
COL18A1-201ENST00000342220 NAPSAO96009 420 aa10.85□□□□□ -0.67
COL18A1-201ENST00000342220 TNFRSF1AP19438 455 aa10.85□□□□□ -0.67
COL18A1-201ENST00000342220 RAB7AP51149 207 aa10.85□□□□□ -0.67
COL18A1-201ENST00000342220 RND3P61587 244 aa10.85□□□□□ -0.67
COL18A1-201ENST00000342220 SLC25A24Q6NUK1 477 aa10.85□□□□□ -0.67
COL18A1-201ENST00000342220 ZNF835Q9Y2P0 537 aa10.85□□□□□ -0.67
COL18A1-201ENST00000342220 SPINT2O43291 252 aa10.85□□□□□ -0.67
COL18A1-201ENST00000342220 CHST1O43916 411 aa10.85□□□□□ -0.67
COL18A1-201ENST00000342220 CLDN14O95500 239 aa10.85□□□□□ -0.67
COL18A1-201ENST00000342220 ELLP55199 621 aaPredicted RBP10.85□□□□□ -0.67
COL18A1-201ENST00000342220 SAXO1Q8IYX7 474 aa10.85□□□□□ -0.67
COL18A1-201ENST00000342220 PPP1R35Q8TAP8 253 aa10.85□□□□□ -0.67
COL18A1-201ENST00000342220 COQ2Q96H96 371 aa10.85□□□□□ -0.67
COL18A1-201ENST00000342220 SSUH2Q9Y2M2 353 aa10.85□□□□□ -0.67
COL18A1-201ENST00000342220 PPIAL4AQ9Y536 164 aa10.85□□□□□ -0.67
COL18A1-201ENST00000342220 TUBG1P23258 451 aa10.85□□□□□ -0.67
COL18A1-201ENST00000342220 NMSQ5H8A3 153 aa10.85□□□□□ -0.67
COL18A1-201ENST00000342220 C1orf194Q5T5A4 169 aa10.85□□□□□ -0.67
COL18A1-201ENST00000342220 POLR3KQ9Y2Y1 108 aaPredicted RBP10.85□□□□□ -0.67
COL18A1-201ENST00000342220 A0A1B0GW64 132 aa10.84□□□□□ -0.67
COL18A1-201ENST00000342220 CCL3L1P16619 93 aa10.84□□□□□ -0.67
COL18A1-201ENST00000342220 UTF1Q5T230 341 aa10.84□□□□□ -0.67
COL18A1-201ENST00000342220 ZNF880Q6PDB4 577 aa10.84□□□□□ -0.67
COL18A1-201ENST00000342220 OR4X1Q8NH49 305 aa10.84□□□□□ -0.67
COL18A1-201ENST00000342220 RNASE6Q93091 150 aaKnown RBP10.84□□□□□ -0.67
COL18A1-201ENST00000342220 ZFP30Q9Y2G7 519 aa10.84□□□□□ -0.67
COL18A1-201ENST00000342220 HPRT1P00492 218 aa10.84□□□□□ -0.67
COL18A1-201ENST00000342220 OPN1MWP04001 364 aa10.84□□□□□ -0.67
COL18A1-201ENST00000342220 IL6RP08887 468 aaPredicted RBP10.84□□□□□ -0.67
COL18A1-201ENST00000342220 OPN1MW2P0DN77 364 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms