RNA–Protein interactions for RNA: ENST00000341948.6

PCDHB13-201, Transcript of protocadherin beta 13, humanhuman

APPRIS P1 BASIC

Gene PCDHB13, Length 5,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13-201ENST00000341948 CD8AP01732 235 aa12.71□□□□□ -0.37
PCDHB13-201ENST00000341948 SNRPCP09234 159 aaKnown RBP12.71□□□□□ -0.37
PCDHB13-201ENST00000341948 ID1P41134 155 aa12.71□□□□□ -0.37
PCDHB13-201ENST00000341948 FXYD3Q14802 87 aa12.71□□□□□ -0.37
PCDHB13-201ENST00000341948 HLA-DRB5Q30154 266 aa12.71□□□□□ -0.37
PCDHB13-201ENST00000341948 RPL39P5Q59GN2 51 aa12.71□□□□□ -0.37
PCDHB13-201ENST00000341948 PEAR1Q5VY43 1037 aaPredicted RBP12.71□□□□□ -0.37
PCDHB13-201ENST00000341948 IL36RNQ9UBH0 155 aa12.71□□□□□ -0.37
PCDHB13-201ENST00000341948 AUP1Q9Y679 476 aa12.71□□□□□ -0.37
PCDHB13-201ENST00000341948 TANC1Q9C0D5 1861 aa12.71□□□□□ -0.38
PCDHB13-201ENST00000341948 THBDP07204 575 aa12.71□□□□□ -0.38
PCDHB13-201ENST00000341948 COMPP49747 757 aaPredicted RBP12.71□□□□□ -0.38
PCDHB13-201ENST00000341948 RBPMS2Q6ZRY4 209 aaKnown RBP12.71□□□□□ -0.38
PCDHB13-201ENST00000341948 SMIM8Q96KF7 97 aa12.71□□□□□ -0.38
PCDHB13-201ENST00000341948 QTRT1Q9BXR0 403 aaKnown RBP12.71□□□□□ -0.38
PCDHB13-201ENST00000341948 FUT9Q9Y231 359 aa12.71□□□□□ -0.38
PCDHB13-201ENST00000341948 HSPB1P04792 205 aaKnown RBP12.7□□□□□ -0.38
PCDHB13-201ENST00000341948 HIST1H1BP16401 226 aaKnown RBP12.7□□□□□ -0.38
PCDHB13-201ENST00000341948 ST6GALNAC3Q8NDV1 305 aa12.7□□□□□ -0.38
PCDHB13-201ENST00000341948 A0A0G2JNJ9 132 aa12.7□□□□□ -0.38
PCDHB13-201ENST00000341948 NCMAPQ5T1S8 102 aa12.7□□□□□ -0.38
PCDHB13-201ENST00000341948 Q9UFV3 132 aa12.7□□□□□ -0.38
PCDHB13-201ENST00000341948 WNK2Q9Y3S1 2297 aa12.7□□□□□ -0.38
PCDHB13-201ENST00000341948 CUL9Q8IWT3 2517 aa12.7□□□□□ -0.38
PCDHB13-201ENST00000341948 OR5AU1Q8NGC0 362 aa12.7□□□□□ -0.38
PCDHB13-201ENST00000341948 HEATR1Q9H583 2144 aaKnown RBP12.7□□□□□ -0.38
PCDHB13-201ENST00000341948 NOTCH2Q04721 2471 aa12.7□□□□□ -0.38
PCDHB13-201ENST00000341948 TEX50A0A1B0GTY4 177 aa12.7□□□□□ -0.38
PCDHB13-201ENST00000341948 PRR32B1ATL7 298 aa12.7□□□□□ -0.38
PCDHB13-201ENST00000341948 MEF2CQ06413 473 aaPredicted RBP12.7□□□□□ -0.38
PCDHB13-201ENST00000341948 TMEM183BQ1AE95 376 aa12.7□□□□□ -0.38
PCDHB13-201ENST00000341948 PQLC2LA1A4F0 135 aa12.69□□□□□ -0.38
PCDHB13-201ENST00000341948 SNURFLB1AK76 121 aa12.69□□□□□ -0.38
PCDHB13-201ENST00000341948 C1QTNF9BB2RNN3 333 aa12.69□□□□□ -0.38
PCDHB13-201ENST00000341948 J3QRE1 110 aa12.69□□□□□ -0.38
PCDHB13-201ENST00000341948 C1QTNF9P0C862 333 aa12.69□□□□□ -0.38
PCDHB13-201ENST00000341948 GAS1P54826 345 aa12.69□□□□□ -0.38
PCDHB13-201ENST00000341948 KBTBD11-OT1A0A1B0GTJ5 212 aa12.69□□□□□ -0.38
PCDHB13-201ENST00000341948 NDUFB4O95168 129 aa12.69□□□□□ -0.38
PCDHB13-201ENST00000341948 REG1AP05451 166 aa12.69□□□□□ -0.38
PCDHB13-201ENST00000341948 IER3P46695 156 aa12.69□□□□□ -0.38
PCDHB13-201ENST00000341948 MFAP4P55083 255 aa12.69□□□□□ -0.38
PCDHB13-201ENST00000341948 HIST3H3Q16695 136 aa12.69□□□□□ -0.38
PCDHB13-201ENST00000341948 FAM90A1Q86YD7 464 aa12.69□□□□□ -0.38
PCDHB13-201ENST00000341948 FOSL1P15407 271 aa12.69□□□□□ -0.38
PCDHB13-201ENST00000341948 SGMS2Q8NHU3 365 aa12.69□□□□□ -0.38
PCDHB13-201ENST00000341948 GALNT14Q96FL9 552 aa12.69□□□□□ -0.38
PCDHB13-201ENST00000341948 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.69□□□□□ -0.38
PCDHB13-201ENST00000341948 A0A1W2PS18 150 aa12.69□□□□□ -0.38
PCDHB13-201ENST00000341948 IFITM2Q01629 132 aa12.69□□□□□ -0.38
PCDHB13-201ENST00000341948 LRRC75BQ2VPJ9 315 aa12.69□□□□□ -0.38
PCDHB13-201ENST00000341948 FAM106AQ4KMX7 169 aa12.69□□□□□ -0.38
PCDHB13-201ENST00000341948 METTL26Q96S19 204 aa12.69□□□□□ -0.38
PCDHB13-201ENST00000341948 ERVH48-1M5A8F1 160 aa12.68□□□□□ -0.38
PCDHB13-201ENST00000341948 ISLRO14498 428 aa12.68□□□□□ -0.38
PCDHB13-201ENST00000341948 PLAUP00749 431 aa12.68□□□□□ -0.38
PCDHB13-201ENST00000341948 IGHG3P01860 377 aa12.68□□□□□ -0.38
PCDHB13-201ENST00000341948 OR2D3Q8NGH3 330 aa12.68□□□□□ -0.38
PCDHB13-201ENST00000341948 RAB24Q969Q5 203 aa12.68□□□□□ -0.38
PCDHB13-201ENST00000341948 DOCK7Q96N67 2140 aa12.68□□□□□ -0.38
PCDHB13-201ENST00000341948 NPIPB11E5RHQ5 1161 aa12.68□□□□□ -0.38
PCDHB13-201ENST00000341948 M0R2Z0 102 aa12.68□□□□□ -0.38
PCDHB13-201ENST00000341948 CCL3L1P16619 93 aa12.68□□□□□ -0.38
PCDHB13-201ENST00000341948 RNFT1Q5M7Z0 435 aa12.68□□□□□ -0.38
PCDHB13-201ENST00000341948 GBGT1Q8N5D6 347 aa12.68□□□□□ -0.38
PCDHB13-201ENST00000341948 ZNF319Q9P2F9 582 aa12.68□□□□□ -0.38
PCDHB13-201ENST00000341948 CCKARP32238 428 aa12.68□□□□□ -0.38
PCDHB13-201ENST00000341948 FBLN5Q9UBX5 448 aa12.68□□□□□ -0.38
PCDHB13-201ENST00000341948 MBD3L4A6NDZ8 208 aaPredicted RBP12.68□□□□□ -0.38
PCDHB13-201ENST00000341948 MBD3L3A6NE82 208 aaPredicted RBP12.68□□□□□ -0.38
PCDHB13-201ENST00000341948 MFSD2BA6NFX1 497 aa12.68□□□□□ -0.38
PCDHB13-201ENST00000341948 MBD3L5A6NJ08 208 aaPredicted RBP12.68□□□□□ -0.38
PCDHB13-201ENST00000341948 ZNF735P0CB33 412 aa12.68□□□□□ -0.38
PCDHB13-201ENST00000341948 WDR82Q6UXN9 313 aa12.68□□□□□ -0.38
PCDHB13-201ENST00000341948 MBD3L2Q8NHZ7 208 aaPredicted RBP12.68□□□□□ -0.38
PCDHB13-201ENST00000341948 ZNF418Q8TF45 676 aaPredicted RBP12.68□□□□□ -0.38
PCDHB13-201ENST00000341948 PLSCR2Q9NRY7 297 aa12.68□□□□□ -0.38
PCDHB13-201ENST00000341948 LINC00312Q9Y6C7 94 aa12.68□□□□□ -0.38
PCDHB13-201ENST00000341948 MPDZO75970 2070 aa12.68□□□□□ -0.38
PCDHB13-201ENST00000341948 DOCK9Q9BZ29 2069 aa12.68□□□□□ -0.38
PCDHB13-201ENST00000341948 CCL1P22362 96 aa12.67□□□□□ -0.38
PCDHB13-201ENST00000341948 CA7P43166 264 aa12.67□□□□□ -0.38
PCDHB13-201ENST00000341948 EFNB1P98172 346 aa12.67□□□□□ -0.38
PCDHB13-201ENST00000341948 PRNTQ86SH4 94 aa12.67□□□□□ -0.38
PCDHB13-201ENST00000341948 LRP11Q86VZ4 500 aa12.67□□□□□ -0.38
PCDHB13-201ENST00000341948 BPIFA4PQ86YQ2 179 aa12.67□□□□□ -0.38
PCDHB13-201ENST00000341948 UCP1P25874 307 aa12.67□□□□□ -0.38
PCDHB13-201ENST00000341948 ATP5G2Q06055 141 aa12.67□□□□□ -0.38
PCDHB13-201ENST00000341948 VAMP3Q15836 100 aa12.67□□□□□ -0.38
PCDHB13-201ENST00000341948 OR10S1Q8NGN2 331 aa12.67□□□□□ -0.38
PCDHB13-201ENST00000341948 A0A087WV48 116 aa12.67□□□□□ -0.38
PCDHB13-201ENST00000341948 TMSB15BA0A087X1C1 80 aa12.67□□□□□ -0.38
PCDHB13-201ENST00000341948 TCAPO15273 167 aa12.67□□□□□ -0.38
PCDHB13-201ENST00000341948 ZP1P60852 638 aa12.67□□□□□ -0.38
PCDHB13-201ENST00000341948 ZNF146Q15072 292 aa12.67□□□□□ -0.38
PCDHB13-201ENST00000341948 PRR30Q53SZ7 412 aaPredicted RBP12.67□□□□□ -0.38
PCDHB13-201ENST00000341948 PUSL1Q8N0Z8 303 aaKnown RBP12.67□□□□□ -0.38
PCDHB13-201ENST00000341948 MEOX2P50222 304 aa12.67□□□□□ -0.38
PCDHB13-201ENST00000341948 RND3P61587 244 aa12.67□□□□□ -0.38
PCDHB13-201ENST00000341948 NHLRC3Q5JS37 347 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms