RNA–Protein interactions for RNA: ENST00000340648.5

RRP1B-201, Transcript of ribosomal RNA processing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP1B, Length 5,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-201ENST00000340648 C8orf88P0DMB2 117 aa12.55□□□□□ -0.4
RRP1B-201ENST00000340648 FAM222BQ8WU58 562 aa12.55□□□□□ -0.4
RRP1B-201ENST00000340648 PNRC2Q9NPJ4 139 aaKnown RBP12.55□□□□□ -0.4
RRP1B-201ENST00000340648 LOC389332A0A1B0GUA5 103 aa12.55□□□□□ -0.4
RRP1B-201ENST00000340648 PGPA6NDG6 321 aa12.55□□□□□ -0.4
RRP1B-201ENST00000340648 DPRXA6NFQ7 191 aa12.55□□□□□ -0.4
RRP1B-201ENST00000340648 LEPROTL1O95214 131 aa12.55□□□□□ -0.4
RRP1B-201ENST00000340648 CFPP27918 469 aa12.55□□□□□ -0.4
RRP1B-201ENST00000340648 UQCRFS1P47985 274 aa12.55□□□□□ -0.4
RRP1B-201ENST00000340648 RASL11BQ9BPW5 248 aa12.55□□□□□ -0.4
RRP1B-201ENST00000340648 TRPM7Q96QT4 1865 aa12.54□□□□□ -0.4
RRP1B-201ENST00000340648 TRBV24-1A0A075B6N3 115 aa12.54□□□□□ -0.4
RRP1B-201ENST00000340648 TRBV9A0A0B4J1U6 114 aa12.54□□□□□ -0.4
RRP1B-201ENST00000340648 LNP1A1A4G5 178 aa12.54□□□□□ -0.4
RRP1B-201ENST00000340648 PRR19A6NJB7 356 aa12.54□□□□□ -0.4
RRP1B-201ENST00000340648 FGFBP3Q8TAT2 258 aa12.54□□□□□ -0.4
RRP1B-201ENST00000340648 CACNA1DQ01668 2161 aa12.54□□□□□ -0.4
RRP1B-201ENST00000340648 FAM157AC9JC47 383 aa12.54□□□□□ -0.4
RRP1B-201ENST00000340648 SERF1AO75920 110 aa12.54□□□□□ -0.4
RRP1B-201ENST00000340648 IGLV3-19P01714 112 aa12.54□□□□□ -0.4
RRP1B-201ENST00000340648 HGFACQ04756 655 aa12.54□□□□□ -0.4
RRP1B-201ENST00000340648 ZNF124Q15973 351 aa12.54□□□□□ -0.4
RRP1B-201ENST00000340648 PLXND1Q9Y4D7 1925 aa12.54□□□□□ -0.4
RRP1B-201ENST00000340648 A0A1B0GW64 132 aa12.54□□□□□ -0.4
RRP1B-201ENST00000340648 A6NDN8 102 aa12.54□□□□□ -0.4
RRP1B-201ENST00000340648 IGHV3-48P01763 117 aa12.54□□□□□ -0.4
RRP1B-201ENST00000340648 GPX4P36969 197 aaPredicted RBP12.54□□□□□ -0.4
RRP1B-201ENST00000340648 RELBQ01201 579 aa12.54□□□□□ -0.4
RRP1B-201ENST00000340648 C14orf144Q96I85 54 aa12.54□□□□□ -0.4
RRP1B-201ENST00000340648 PGLYRP4Q96LB8 373 aa12.54□□□□□ -0.4
RRP1B-201ENST00000340648 MS4A5Q9H3V2 200 aa12.54□□□□□ -0.4
RRP1B-201ENST00000340648 AMMECR1Q9Y4X0 333 aaPredicted RBP12.54□□□□□ -0.4
RRP1B-201ENST00000340648 ASXL3Q9C0F0 2248 aa12.54□□□□□ -0.4
RRP1B-201ENST00000340648 NAPSAO96009 420 aa12.54□□□□□ -0.4
RRP1B-201ENST00000340648 MAS1LP35410 378 aa12.54□□□□□ -0.4
RRP1B-201ENST00000340648 PTGDSP41222 190 aa12.54□□□□□ -0.4
RRP1B-201ENST00000340648 PRRX1P54821 245 aa12.54□□□□□ -0.4
RRP1B-201ENST00000340648 GBGT1Q8N5D6 347 aa12.54□□□□□ -0.4
RRP1B-201ENST00000340648 WBP1Q96G27 269 aa12.54□□□□□ -0.4
RRP1B-201ENST00000340648 IGLV3-12A0A075B6K2 115 aa12.53□□□□□ -0.4
RRP1B-201ENST00000340648 S100A4P26447 101 aaKnown RBP12.53□□□□□ -0.4
RRP1B-201ENST00000340648 ADMP35318 185 aa12.53□□□□□ -0.4
RRP1B-201ENST00000340648 TNFSF10P50591 281 aa12.53□□□□□ -0.4
RRP1B-201ENST00000340648 LEMD1Q68G75 181 aa12.53□□□□□ -0.4
RRP1B-201ENST00000340648 PPP1R32Q7Z5V6 425 aa12.53□□□□□ -0.4
RRP1B-201ENST00000340648 ITLN1Q8WWA0 313 aa12.53□□□□□ -0.4
RRP1B-201ENST00000340648 A0A1W2PRD5 423 aa12.53□□□□□ -0.4
RRP1B-201ENST00000340648 A0A1W2PRF3 423 aa12.53□□□□□ -0.4
RRP1B-201ENST00000340648 A0A1W2PRM7 423 aa12.53□□□□□ -0.4
RRP1B-201ENST00000340648 HYPMO75409 117 aa12.53□□□□□ -0.4
RRP1B-201ENST00000340648 CRYGSP22914 178 aa12.53□□□□□ -0.4
RRP1B-201ENST00000340648 CFHR1Q03591 330 aa12.53□□□□□ -0.4
RRP1B-201ENST00000340648 HCP5Q6MZN7 132 aa12.53□□□□□ -0.4
RRP1B-201ENST00000340648 NABP1Q96AH0 204 aa12.53□□□□□ -0.4
RRP1B-201ENST00000340648 LINC00470Q9BZP3 86 aa12.53□□□□□ -0.4
RRP1B-201ENST00000340648 IGLV3-32A0A0A0MS00 114 aa12.53□□□□□ -0.4
RRP1B-201ENST00000340648 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.53□□□□□ -0.4
RRP1B-201ENST00000340648 K7ERU9 68 aa12.53□□□□□ -0.4
RRP1B-201ENST00000340648 CA2P00918 260 aa12.53□□□□□ -0.4
RRP1B-201ENST00000340648 CCL8P80075 99 aa12.53□□□□□ -0.4
RRP1B-201ENST00000340648 KRTCAP3Q53RY4 240 aa12.53□□□□□ -0.4
RRP1B-201ENST00000340648 SLC35E4Q6ICL7 350 aa12.53□□□□□ -0.4
RRP1B-201ENST00000340648 OR8B3Q8NGG8 313 aa12.53□□□□□ -0.4
RRP1B-201ENST00000340648 MBD3L1Q8WWY6 194 aa12.53□□□□□ -0.4
RRP1B-201ENST00000340648 RBM14Q96PK6 669 aaKnown RBP12.53□□□□□ -0.4
RRP1B-201ENST00000340648 OPN3Q9H1Y3 402 aaPredicted RBP12.53□□□□□ -0.4
RRP1B-201ENST00000340648 RAMP3O60896 148 aa12.53□□□□□ -0.4
RRP1B-201ENST00000340648 DEFB123Q8N688 67 aa12.53□□□□□ -0.4
RRP1B-201ENST00000340648 DNAJC4Q9NNZ3 241 aa12.53□□□□□ -0.4
RRP1B-201ENST00000340648 JPT1Q9UK76 154 aa12.53□□□□□ -0.4
RRP1B-201ENST00000340648 H3BTX0 84 aa12.52□□□□□ -0.4
RRP1B-201ENST00000340648 WISP1O95388 367 aa12.52□□□□□ -0.4
RRP1B-201ENST00000340648 DNM1P46Q6ZS02 220 aa12.52□□□□□ -0.4
RRP1B-201ENST00000340648 DCTN5Q9BTE1 182 aa12.52□□□□□ -0.4
RRP1B-201ENST00000340648 IGHV3-72A0A0B4J1Y9 119 aa12.52□□□□□ -0.4
RRP1B-201ENST00000340648 RPL8P62917 257 aaKnown RBP12.52□□□□□ -0.4
RRP1B-201ENST00000340648 FAM19A2Q8N3H0 131 aa12.52□□□□□ -0.4
RRP1B-201ENST00000340648 GCSAMQ8N6F7 178 aa12.52□□□□□ -0.4
RRP1B-201ENST00000340648 SLC25A10Q9UBX3 287 aaPredicted RBP12.52□□□□□ -0.4
RRP1B-201ENST00000340648 TRAV24A0A0B4J272 114 aa12.52□□□□□ -0.41
RRP1B-201ENST00000340648 CRYABP02511 175 aaKnown RBP12.52□□□□□ -0.41
RRP1B-201ENST00000340648 RND2P52198 227 aa12.52□□□□□ -0.41
RRP1B-201ENST00000340648 TMEM242Q9NWH2 141 aa12.52□□□□□ -0.41
RRP1B-201ENST00000340648 DLL1O00548 723 aa12.52□□□□□ -0.41
RRP1B-201ENST00000340648 NMUP48645 174 aa12.52□□□□□ -0.41
RRP1B-201ENST00000340648 TMEM177Q53S58 311 aa12.52□□□□□ -0.41
RRP1B-201ENST00000340648 OR8B2Q96RD0 313 aa12.52□□□□□ -0.41
RRP1B-201ENST00000340648 TRGV8A0A0C4DH27 118 aa12.51□□□□□ -0.41
RRP1B-201ENST00000340648 GNG7O60262 68 aa12.51□□□□□ -0.41
RRP1B-201ENST00000340648 IGFBP2P18065 325 aa12.51□□□□□ -0.41
RRP1B-201ENST00000340648 GCSAMLQ5JQS6 135 aa12.51□□□□□ -0.41
RRP1B-201ENST00000340648 SLC25A34Q6PIV7 304 aa12.51□□□□□ -0.41
RRP1B-201ENST00000340648 PCSK4Q6UW60 755 aa12.51□□□□□ -0.41
RRP1B-201ENST00000340648 GFRALQ6UXV0 394 aa12.51□□□□□ -0.41
RRP1B-201ENST00000340648 OR13A1Q8NGR1 328 aa12.51□□□□□ -0.41
RRP1B-201ENST00000340648 ZNF524Q96C55 264 aa12.51□□□□□ -0.41
RRP1B-201ENST00000340648 MIEN1Q9BRT3 115 aa12.51□□□□□ -0.41
RRP1B-201ENST00000340648 ZNF324BQ6AW86 544 aaPredicted RBP12.51□□□□□ -0.41
RRP1B-201ENST00000340648 MUC15Q8N387 334 aa12.51□□□□□ -0.41
RRP1B-201ENST00000340648 ZIC4Q8N9L1 334 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms