RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 CTDSP1Q9GZU7 261 aa12.62□□□□□ -0.39
BRAT1-201ENST00000340611 IL36RNQ9UBH0 155 aa12.62□□□□□ -0.39
BRAT1-201ENST00000340611 DUSP13Q9UII6 198 aa12.62□□□□□ -0.39
BRAT1-201ENST00000340611 TRAV39A0A0B4J263 110 aa12.61□□□□□ -0.39
BRAT1-201ENST00000340611 ODAMA1E959 279 aa12.61□□□□□ -0.39
BRAT1-201ENST00000340611 ZNF732B4DXR9 585 aa12.61□□□□□ -0.39
BRAT1-201ENST00000340611 YPEL1O60688 119 aa12.61□□□□□ -0.39
BRAT1-201ENST00000340611 PITX3O75364 302 aa12.61□□□□□ -0.39
BRAT1-201ENST00000340611 IGLV1-44P01699 117 aa12.61□□□□□ -0.39
BRAT1-201ENST00000340611 SUMO1P63165 101 aaKnown RBP12.61□□□□□ -0.39
BRAT1-201ENST00000340611 BSXQ3C1V8 233 aa12.61□□□□□ -0.39
BRAT1-201ENST00000340611 SPIN3Q5JUX0 258 aa12.61□□□□□ -0.39
BRAT1-201ENST00000340611 MRGPRGQ86SM5 289 aa12.61□□□□□ -0.39
BRAT1-201ENST00000340611 RBMXL1Q96E39 390 aaKnown RBP12.61□□□□□ -0.39
BRAT1-201ENST00000340611 YPEL2Q96QA6 119 aa12.61□□□□□ -0.39
BRAT1-201ENST00000340611 SAMD10Q9BYL1 202 aa12.61□□□□□ -0.39
BRAT1-201ENST00000340611 UBE2J1Q9Y385 318 aaPredicted RBP12.61□□□□□ -0.39
BRAT1-201ENST00000340611 C3orf85A0A1B0GTC6 90 aa12.61□□□□□ -0.39
BRAT1-201ENST00000340611 H3BP45 60 aa12.61□□□□□ -0.39
BRAT1-201ENST00000340611 ADAM20O43506 726 aa12.61□□□□□ -0.39
BRAT1-201ENST00000340611 CDS2O95674 445 aa12.61□□□□□ -0.39
BRAT1-201ENST00000340611 TOMM40O96008 361 aa12.61□□□□□ -0.39
BRAT1-201ENST00000340611 TESK1Q15569 626 aa12.61□□□□□ -0.39
BRAT1-201ENST00000340611 Q6ZPA2 131 aa12.61□□□□□ -0.39
BRAT1-201ENST00000340611 PINX1Q96BK5 328 aaKnown RBP12.61□□□□□ -0.39
BRAT1-201ENST00000340611 HIPK2Q9H2X6 1198 aa12.61□□□□□ -0.39
BRAT1-201ENST00000340611 PLEKHF2Q9H8W4 249 aa12.61□□□□□ -0.39
BRAT1-201ENST00000340611 Q9N2K0 584 aa12.61□□□□□ -0.39
BRAT1-201ENST00000340611 WIPI2Q9Y4P8 454 aa12.61□□□□□ -0.39
BRAT1-201ENST00000340611 C16orf97H3BN30 126 aa12.61□□□□□ -0.39
BRAT1-201ENST00000340611 HMGB3O15347 200 aaKnown RBP12.61□□□□□ -0.39
BRAT1-201ENST00000340611 SYNGR1O43759 233 aa12.61□□□□□ -0.39
BRAT1-201ENST00000340611 ADORA2A-AS1P86434 159 aa12.61□□□□□ -0.39
BRAT1-201ENST00000340611 FAM78BQ5VT40 261 aa12.61□□□□□ -0.39
BRAT1-201ENST00000340611 CRYBG3Q68DQ2 2970 aa12.61□□□□□ -0.39
BRAT1-201ENST00000340611 ZNF787Q6DD87 383 aa12.61□□□□□ -0.39
BRAT1-201ENST00000340611 ZNF695Q8IW36 515 aa12.61□□□□□ -0.39
BRAT1-201ENST00000340611 ODF3L1Q8IXM7 274 aa12.61□□□□□ -0.39
BRAT1-201ENST00000340611 ZC2HC1AQ96GY0 325 aa12.61□□□□□ -0.39
BRAT1-201ENST00000340611 OR51I2Q9H344 312 aa12.61□□□□□ -0.39
BRAT1-201ENST00000340611 C11orf1Q9H5F2 150 aa12.61□□□□□ -0.39
BRAT1-201ENST00000340611 RNF114Q9Y508 228 aa12.61□□□□□ -0.39
BRAT1-201ENST00000340611 SH2D1BO14796 132 aa12.6□□□□□ -0.39
BRAT1-201ENST00000340611 THBDP07204 575 aa12.6□□□□□ -0.39
BRAT1-201ENST00000340611 BCL2P10415 239 aa12.6□□□□□ -0.39
BRAT1-201ENST00000340611 CNN3Q15417 329 aaKnown RBP12.6□□□□□ -0.39
BRAT1-201ENST00000340611 FFAR4Q5NUL3 377 aa12.6□□□□□ -0.39
BRAT1-201ENST00000340611 PRR27Q6MZM9 219 aa12.6□□□□□ -0.39
BRAT1-201ENST00000340611 ZDHHC23Q8IYP9 409 aa12.6□□□□□ -0.39
BRAT1-201ENST00000340611 ZNF611Q8N823 705 aa12.6□□□□□ -0.39
BRAT1-201ENST00000340611 USP9XQ93008 2570 aaPredicted RBP12.6□□□□□ -0.39
BRAT1-201ENST00000340611 MPPED1O15442 326 aa12.6□□□□□ -0.39
BRAT1-201ENST00000340611 HYPMO75409 117 aa12.6□□□□□ -0.39
BRAT1-201ENST00000340611 SAP30O75446 220 aa12.6□□□□□ -0.39
BRAT1-201ENST00000340611 HRASP01112 189 aa12.6□□□□□ -0.39
BRAT1-201ENST00000340611 TGIF2LYQ8IUE0 185 aa12.6□□□□□ -0.39
BRAT1-201ENST00000340611 PYGO2Q9BRQ0 406 aa12.6□□□□□ -0.39
BRAT1-201ENST00000340611 WNT10AQ9GZT5 417 aa12.6□□□□□ -0.39
BRAT1-201ENST00000340611 ZNF286AQ9HBT8 521 aa12.6□□□□□ -0.39
BRAT1-201ENST00000340611 HSPB7Q9UBY9 170 aa12.6□□□□□ -0.39
BRAT1-201ENST00000340611 ZNF391Q9UJN7 358 aa12.6□□□□□ -0.39
BRAT1-201ENST00000340611 ASH1LQ9NR48 2969 aaKnown RBP12.6□□□□□ -0.39
BRAT1-201ENST00000340611 ANKRD30BLA7E2S9 258 aa12.59□□□□□ -0.39
BRAT1-201ENST00000340611 RHBDL1O75783 438 aa12.59□□□□□ -0.39
BRAT1-201ENST00000340611 WDR86Q86TI4 376 aa12.59□□□□□ -0.39
BRAT1-201ENST00000340611 LINC01560Q8TB33 94 aa12.59□□□□□ -0.39
BRAT1-201ENST00000340611 IMMP2LQ96T52 175 aa12.59□□□□□ -0.39
BRAT1-201ENST00000340611 VSIRQ9H7M9 311 aa12.59□□□□□ -0.39
BRAT1-201ENST00000340611 PPYP01298 95 aa12.59□□□□□ -0.39
BRAT1-201ENST00000340611 TNFSF4P23510 183 aa12.59□□□□□ -0.39
BRAT1-201ENST00000340611 TPPP2P59282 170 aa12.59□□□□□ -0.39
BRAT1-201ENST00000340611 OR4A47Q6IF82 309 aa12.59□□□□□ -0.39
BRAT1-201ENST00000340611 H1FOOQ8IZA3 346 aaPredicted RBP12.59□□□□□ -0.39
BRAT1-201ENST00000340611 CCDC71LQ8N9Z2 235 aa12.59□□□□□ -0.39
BRAT1-201ENST00000340611 SPSB1Q96BD6 273 aa12.59□□□□□ -0.39
BRAT1-201ENST00000340611 C10orf35Q96D05 121 aa12.59□□□□□ -0.39
BRAT1-201ENST00000340611 LYRM2Q9NU23 88 aaPredicted RBP12.59□□□□□ -0.39
BRAT1-201ENST00000340611 BET1LQ9NYM9 111 aa12.59□□□□□ -0.39
BRAT1-201ENST00000340611 CLN8Q9UBY8 286 aa12.59□□□□□ -0.39
BRAT1-201ENST00000340611 UQCR10Q9UDW1 63 aa12.59□□□□□ -0.39
BRAT1-201ENST00000340611 ST3GAL6Q9Y274 331 aa12.59□□□□□ -0.39
BRAT1-201ENST00000340611 HBE1P02100 147 aa12.58□□□□□ -0.39
BRAT1-201ENST00000340611 FUT6P51993 359 aa12.58□□□□□ -0.39
BRAT1-201ENST00000340611 TBC1D26Q86UD7 250 aa12.58□□□□□ -0.39
BRAT1-201ENST00000340611 ZNF442Q9H7R0 627 aa12.58□□□□□ -0.39
BRAT1-201ENST00000340611 TACC2O95359 2948 aa12.58□□□□□ -0.39
BRAT1-201ENST00000340611 DIRC3C9JPN6 131 aa12.58□□□□□ -0.4
BRAT1-201ENST00000340611 F2Z2F3 143 aa12.58□□□□□ -0.4
BRAT1-201ENST00000340611 RAB29O14966 203 aa12.58□□□□□ -0.4
BRAT1-201ENST00000340611 GRPP07492 148 aa12.58□□□□□ -0.4
BRAT1-201ENST00000340611 GNLYP22749 145 aa12.58□□□□□ -0.4
BRAT1-201ENST00000340611 RPL23P62829 140 aaKnown RBP12.58□□□□□ -0.4
BRAT1-201ENST00000340611 Q6ZR03 302 aa12.58□□□□□ -0.4
BRAT1-201ENST00000340611 TMEM222Q9H0R3 208 aa12.58□□□□□ -0.4
BRAT1-201ENST00000340611 JKAMPQ9P055 326 aa12.58□□□□□ -0.4
BRAT1-201ENST00000340611 SLC45A2Q9UMX9 530 aa12.58□□□□□ -0.4
BRAT1-201ENST00000340611 TMEM8BA6NDV4 472 aa12.58□□□□□ -0.4
BRAT1-201ENST00000340611 C22orf46C9J442 243 aa12.58□□□□□ -0.4
BRAT1-201ENST00000340611 CHST1O43916 411 aa12.58□□□□□ -0.4
BRAT1-201ENST00000340611 TIMM8AO60220 97 aaPredicted RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms