RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 UNQ6494/PRO21346Q6UXR6 183 aa8.37□□□□□ -1.07
RBFOX1-202ENST00000340209 ZNF66Q6ZN08 573 aa8.37□□□□□ -1.07
RBFOX1-202ENST00000340209 MOB3BQ86TA1 216 aa8.37□□□□□ -1.07
RBFOX1-202ENST00000340209 OR13D1Q8NGV5 346 aa8.37□□□□□ -1.07
RBFOX1-202ENST00000340209 CTSZQ9UBR2 303 aa8.37□□□□□ -1.07
RBFOX1-202ENST00000340209 A0A1W2PPE2 198 aa8.36□□□□□ -1.07
RBFOX1-202ENST00000340209 MAP1LC3B2A6NCE7 125 aa8.36□□□□□ -1.07
RBFOX1-202ENST00000340209 HPRT1P00492 218 aa8.36□□□□□ -1.07
RBFOX1-202ENST00000340209 LHBP01229 141 aa8.36□□□□□ -1.07
RBFOX1-202ENST00000340209 PLGLAQ15195 96 aa8.36□□□□□ -1.07
RBFOX1-202ENST00000340209 CST9LP1Q5W188 147 aa8.36□□□□□ -1.07
RBFOX1-202ENST00000340209 OR4A47Q6IF82 309 aa8.36□□□□□ -1.07
RBFOX1-202ENST00000340209 MAP1LC3BQ9GZQ8 125 aa8.36□□□□□ -1.07
RBFOX1-202ENST00000340209 GAL3ST2Q9H3Q3 398 aa8.36□□□□□ -1.07
RBFOX1-202ENST00000340209 NOTCH2Q04721 2471 aa8.36□□□□□ -1.07
RBFOX1-202ENST00000340209 HRNRQ86YZ3 2850 aaPredicted RBP8.36□□□□□ -1.07
RBFOX1-202ENST00000340209 SLC25A6P12236 298 aa8.36□□□□□ -1.07
RBFOX1-202ENST00000340209 HTD2P86397 168 aa8.36□□□□□ -1.07
RBFOX1-202ENST00000340209 TCF23Q7RTU1 214 aa8.36□□□□□ -1.07
RBFOX1-202ENST00000340209 ZBTB34Q8NCN2 500 aa8.36□□□□□ -1.07
RBFOX1-202ENST00000340209 NUP37Q8NFH4 326 aa8.36□□□□□ -1.07
RBFOX1-202ENST00000340209 GATAD1Q8WUU5 269 aa8.36□□□□□ -1.07
RBFOX1-202ENST00000340209 TAF15Q92804 592 aaKnown RBP eCLIP8.36□□□□□ -1.07
RBFOX1-202ENST00000340209 RBFOX3A6NFN3 312 aa8.36□□□□□ -1.07
RBFOX1-202ENST00000340209 WNT2P09544 360 aa8.36□□□□□ -1.07
RBFOX1-202ENST00000340209 GNLYP22749 145 aa8.36□□□□□ -1.07
RBFOX1-202ENST00000340209 RAB7AP51149 207 aa8.36□□□□□ -1.07
RBFOX1-202ENST00000340209 ARF6P62330 175 aa8.36□□□□□ -1.07
RBFOX1-202ENST00000340209 RTL8BQ17RB0 113 aa8.36□□□□□ -1.07
RBFOX1-202ENST00000340209 NCMAPQ5T1S8 102 aa8.36□□□□□ -1.07
RBFOX1-202ENST00000340209 UQCC3Q6UW78 93 aa8.36□□□□□ -1.07
RBFOX1-202ENST00000340209 SSX7Q7RTT5 188 aa8.36□□□□□ -1.07
RBFOX1-202ENST00000340209 OR10W1Q8NGF6 305 aa8.36□□□□□ -1.07
RBFOX1-202ENST00000340209 ACY3Q96HD9 319 aa8.36□□□□□ -1.07
RBFOX1-202ENST00000340209 TCF19Q9Y242 345 aa8.36□□□□□ -1.07
RBFOX1-202ENST00000340209 ZNF727A8MUV8 499 aa8.35□□□□□ -1.07
RBFOX1-202ENST00000340209 YPEL1O60688 119 aa8.35□□□□□ -1.07
RBFOX1-202ENST00000340209 APOA2P02652 100 aa8.35□□□□□ -1.07
RBFOX1-202ENST00000340209 PRB4P10163 310 aaPredicted RBP8.35□□□□□ -1.07
RBFOX1-202ENST00000340209 ADORA2A-AS1P86434 159 aa8.35□□□□□ -1.07
RBFOX1-202ENST00000340209 YPEL2Q96QA6 119 aa8.35□□□□□ -1.07
RBFOX1-202ENST00000340209 GATA2P23769 480 aaPredicted RBP8.35□□□□□ -1.07
RBFOX1-202ENST00000340209 HILPDAQ9Y5L2 63 aa8.35□□□□□ -1.07
RBFOX1-202ENST00000340209 SIAH2O43255 324 aa8.35□□□□□ -1.07
RBFOX1-202ENST00000340209 SLC25A17O43808 307 aa8.35□□□□□ -1.07
RBFOX1-202ENST00000340209 C19orf35Q6ZS72 473 aa8.35□□□□□ -1.07
RBFOX1-202ENST00000340209 LHFPL4Q7Z7J7 247 aa8.35□□□□□ -1.07
RBFOX1-202ENST00000340209 DMRTC2Q8IXT2 367 aaPredicted RBP8.35□□□□□ -1.07
RBFOX1-202ENST00000340209 CLRN3Q8NCR9 226 aa8.35□□□□□ -1.07
RBFOX1-202ENST00000340209 OR10G4Q8NGN3 311 aa8.35□□□□□ -1.07
RBFOX1-202ENST00000340209 OR10G9Q8NGN4 311 aa8.35□□□□□ -1.07
RBFOX1-202ENST00000340209 OR10G7Q8NGN6 311 aa8.35□□□□□ -1.07
RBFOX1-202ENST00000340209 RCC1LQ96I51 464 aaKnown RBP8.35□□□□□ -1.07
RBFOX1-202ENST00000340209 DOK5Q9P104 306 aa8.35□□□□□ -1.07
RBFOX1-202ENST00000340209 ZMAT5Q9UDW3 170 aaKnown RBP8.35□□□□□ -1.07
RBFOX1-202ENST00000340209 A0A0U1RQK1 487 aa8.34□□□□□ -1.07
RBFOX1-202ENST00000340209 A0A1W2PPV4 95 aa8.34□□□□□ -1.07
RBFOX1-202ENST00000340209 DNASE2O00115 360 aaPredicted RBP8.34□□□□□ -1.07
RBFOX1-202ENST00000340209 HSPB1P04792 205 aaKnown RBP8.34□□□□□ -1.07
RBFOX1-202ENST00000340209 HES1Q14469 280 aa8.34□□□□□ -1.07
RBFOX1-202ENST00000340209 MLANAQ16655 118 aa8.34□□□□□ -1.07
RBFOX1-202ENST00000340209 MIC13Q5XKP0 118 aa8.34□□□□□ -1.07
RBFOX1-202ENST00000340209 NECAP1Q8NC96 275 aa8.34□□□□□ -1.07
RBFOX1-202ENST00000340209 ABHD5Q8WTS1 349 aa8.34□□□□□ -1.07
RBFOX1-202ENST00000340209 ZNF835Q9Y2P0 537 aa8.34□□□□□ -1.07
RBFOX1-202ENST00000340209 OR51B2Q9Y5P1 312 aa8.34□□□□□ -1.07
RBFOX1-202ENST00000340209 ACSM6Q6P461 480 aa8.34□□□□□ -1.07
RBFOX1-202ENST00000340209 COMMD5Q9GZQ3 224 aa8.34□□□□□ -1.07
RBFOX1-202ENST00000340209 WDR61Q9GZS3 305 aaKnown RBP8.34□□□□□ -1.07
RBFOX1-202ENST00000340209 PLEKHA3Q9HB20 300 aa8.34□□□□□ -1.07
RBFOX1-202ENST00000340209 HSPB7Q9UBY9 170 aa8.34□□□□□ -1.07
RBFOX1-202ENST00000340209 hCG_1809904A0A1W2PP81 198 aa8.34□□□□□ -1.07
RBFOX1-202ENST00000340209 A0A1W2PPH5 198 aa8.34□□□□□ -1.07
RBFOX1-202ENST00000340209 A0A1W2PR64 198 aa8.34□□□□□ -1.07
RBFOX1-202ENST00000340209 A0A1W2PRV1 198 aa8.34□□□□□ -1.07
RBFOX1-202ENST00000340209 ZNF729A6NN14 1252 aaPredicted RBP8.34□□□□□ -1.07
RBFOX1-202ENST00000340209 FAM157AC9JC47 383 aa8.34□□□□□ -1.07
RBFOX1-202ENST00000340209 J3QR06 171 aa8.34□□□□□ -1.07
RBFOX1-202ENST00000340209 GATA4P43694 442 aa8.34□□□□□ -1.07
RBFOX1-202ENST00000340209 TMEM147Q9BVK8 224 aa8.34□□□□□ -1.07
RBFOX1-202ENST00000340209 SLC35B3Q9H1N7 401 aa8.34□□□□□ -1.07
RBFOX1-202ENST00000340209 RAB9BQ9NP90 201 aa8.34□□□□□ -1.07
RBFOX1-202ENST00000340209 RPUSD1Q9UJJ7 312 aaKnown RBP8.34□□□□□ -1.07
RBFOX1-202ENST00000340209 RAB5CP51148 216 aa8.34□□□□□ -1.08
RBFOX1-202ENST00000340209 HCP5Q6MZN7 132 aa8.34□□□□□ -1.08
RBFOX1-202ENST00000340209 TGIF2LXQ8IUE1 241 aa8.34□□□□□ -1.08
RBFOX1-202ENST00000340209 FAM24BQ8N5W8 94 aa8.34□□□□□ -1.08
RBFOX1-202ENST00000340209 EIF4E3Q8N5X7 224 aaKnown RBP8.34□□□□□ -1.08
RBFOX1-202ENST00000340209 OR4F5Q8NH21 305 aa8.34□□□□□ -1.08
RBFOX1-202ENST00000340209 OR4F4Q96R69 305 aa8.34□□□□□ -1.08
RBFOX1-202ENST00000340209 PIGBOS1A0A0B4J2F0 54 aa8.33□□□□□ -1.08
RBFOX1-202ENST00000340209 SRRM4A7MD48 611 aaKnown RBP8.33□□□□□ -1.08
RBFOX1-202ENST00000340209 B9A039 149 aa8.33□□□□□ -1.08
RBFOX1-202ENST00000340209 TAGLN2P37802 199 aaKnown RBP8.33□□□□□ -1.08
RBFOX1-202ENST00000340209 ZNF672Q499Z4 452 aaPredicted RBP8.33□□□□□ -1.08
RBFOX1-202ENST00000340209 SEC11CQ9BY50 192 aa8.33□□□□□ -1.08
RBFOX1-202ENST00000340209 C11orf1Q9H5F2 150 aa8.33□□□□□ -1.08
RBFOX1-202ENST00000340209 DOPEY2Q9Y3R5 2298 aa8.33□□□□□ -1.08
RBFOX1-202ENST00000340209 C7orf77A4D0Y5 90 aa8.33□□□□□ -1.08
RBFOX1-202ENST00000340209 SAA1P0DJI8 122 aaPredicted RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms