RNA–Protein interactions for RNA: ENST00000340019.4

TMC1-202, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TMC1, Length 3,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-202ENST00000340019 FAM71E2Q8N5Q1 922 aa6.28□□□□□ -1.4
TMC1-202ENST00000340019 HYLS1Q96M11 299 aa6.28□□□□□ -1.4
TMC1-202ENST00000340019 C11orf1Q9H5F2 150 aa6.28□□□□□ -1.4
TMC1-202ENST00000340019 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.28□□□□□ -1.4
TMC1-202ENST00000340019 POMT1Q9Y6A1 747 aa6.28□□□□□ -1.4
TMC1-202ENST00000340019 FLNBO75369 2602 aaKnown RBP6.27□□□□□ -1.41
TMC1-202ENST00000340019 DEDDO75618 318 aa6.27□□□□□ -1.41
TMC1-202ENST00000340019 IGKV1D-33P01593 117 aa6.27□□□□□ -1.41
TMC1-202ENST00000340019 IGKV1-33P01594 117 aa6.27□□□□□ -1.41
TMC1-202ENST00000340019 FOSL1P15407 271 aa6.27□□□□□ -1.41
TMC1-202ENST00000340019 MRGPRG-AS1Q2M3A8 158 aa6.27□□□□□ -1.41
TMC1-202ENST00000340019 PDLIM3Q53GG5 364 aaPredicted RBP6.27□□□□□ -1.41
TMC1-202ENST00000340019 PRSS54Q6PEW0 395 aa6.27□□□□□ -1.41
TMC1-202ENST00000340019 ZNF429Q86V71 674 aa6.27□□□□□ -1.41
TMC1-202ENST00000340019 FOXRED2Q8IWF2 684 aa6.27□□□□□ -1.41
TMC1-202ENST00000340019 Q8N6K4 173 aa6.27□□□□□ -1.41
TMC1-202ENST00000340019 OR1S1Q8NH92 325 aa6.27□□□□□ -1.41
TMC1-202ENST00000340019 OR5AC2Q9NZP5 309 aa6.27□□□□□ -1.41
TMC1-202ENST00000340019 HSPB7Q9UBY9 170 aa6.27□□□□□ -1.41
TMC1-202ENST00000340019 RCL1Q9Y2P8 373 aaKnown RBP6.27□□□□□ -1.41
TMC1-202ENST00000340019 NSG2Q9Y328 171 aa6.27□□□□□ -1.41
TMC1-202ENST00000340019 SOX21Q9Y651 276 aaPredicted RBP6.27□□□□□ -1.41
TMC1-202ENST00000340019 C15orf61A6NNL5 157 aa6.27□□□□□ -1.41
TMC1-202ENST00000340019 FAM90A26D6RGX4 464 aa6.27□□□□□ -1.41
TMC1-202ENST00000340019 UPK2O00526 184 aa6.27□□□□□ -1.41
TMC1-202ENST00000340019 ST8SIA3O43173 380 aa6.27□□□□□ -1.41
TMC1-202ENST00000340019 KBTBD11O94819 623 aa6.27□□□□□ -1.41
TMC1-202ENST00000340019 SCGB1D2O95969 90 aa6.27□□□□□ -1.41
TMC1-202ENST00000340019 MOSP00540 346 aa6.27□□□□□ -1.41
TMC1-202ENST00000340019 SNRNP70P08621 437 aaKnown RBP6.27□□□□□ -1.41
TMC1-202ENST00000340019 CD24P25063 80 aa6.27□□□□□ -1.41
TMC1-202ENST00000340019 CNTFRP26992 372 aa6.27□□□□□ -1.41
TMC1-202ENST00000340019 EIF2B2P49770 351 aaKnown RBP6.27□□□□□ -1.41
TMC1-202ENST00000340019 DYNLT3P51808 116 aa6.27□□□□□ -1.41
TMC1-202ENST00000340019 NKX2-5P52952 324 aaPredicted RBP6.27□□□□□ -1.41
TMC1-202ENST00000340019 TMEM65Q6PI78 240 aa6.27□□□□□ -1.41
TMC1-202ENST00000340019 THNSL2Q86YJ6 484 aa6.27□□□□□ -1.41
TMC1-202ENST00000340019 EAF1Q96JC9 268 aaPredicted RBP6.27□□□□□ -1.41
TMC1-202ENST00000340019 ZFP57Q9NU63 452 aa6.27□□□□□ -1.41
TMC1-202ENST00000340019 TMEM14BQ9NUH8 114 aa6.27□□□□□ -1.41
TMC1-202ENST00000340019 ACANP16112 2415 aa6.27□□□□□ -1.41
TMC1-202ENST00000340019 HMSDA8MTL9 139 aa6.27□□□□□ -1.41
TMC1-202ENST00000340019 NXPH3O95157 252 aa6.27□□□□□ -1.41
TMC1-202ENST00000340019 FGF2P09038 288 aa6.27□□□□□ -1.41
TMC1-202ENST00000340019 PET100P0DJ07 73 aa6.27□□□□□ -1.41
TMC1-202ENST00000340019 OR2B8PP59922 312 aa6.27□□□□□ -1.41
TMC1-202ENST00000340019 S100A10P60903 97 aa6.27□□□□□ -1.41
TMC1-202ENST00000340019 POLR2GP62487 172 aaKnown RBP eCLIP6.27□□□□□ -1.41
TMC1-202ENST00000340019 TNFRSF9Q07011 255 aa6.27□□□□□ -1.41
TMC1-202ENST00000340019 PSG5Q15238 335 aa6.27□□□□□ -1.41
TMC1-202ENST00000340019 C9orf139Q6ZV77 190 aa6.27□□□□□ -1.41
TMC1-202ENST00000340019 NPBQ8NG41 125 aa6.27□□□□□ -1.41
TMC1-202ENST00000340019 OR2T10Q8NGZ9 312 aa6.27□□□□□ -1.41
TMC1-202ENST00000340019 OR52E5Q8NH55 327 aa6.27□□□□□ -1.41
TMC1-202ENST00000340019 OR4A5Q8NH83 315 aa6.27□□□□□ -1.41
TMC1-202ENST00000340019 VSTM2AQ8TAG5 236 aa6.27□□□□□ -1.41
TMC1-202ENST00000340019 NANPQ8TBE9 248 aa6.27□□□□□ -1.41
TMC1-202ENST00000340019 TMEM167AQ8TBQ9 72 aa6.27□□□□□ -1.41
TMC1-202ENST00000340019 QTRT1Q9BXR0 403 aaKnown RBP6.27□□□□□ -1.41
TMC1-202ENST00000340019 MBD2Q9UBB5 411 aa6.27□□□□□ -1.41
TMC1-202ENST00000340019 NUP50Q9UKX7 468 aa6.27□□□□□ -1.41
TMC1-202ENST00000340019 FOXA2Q9Y261 457 aaPredicted RBP6.27□□□□□ -1.41
TMC1-202ENST00000340019 SLC25A17O43808 307 aa6.26□□□□□ -1.41
TMC1-202ENST00000340019 CD5LO43866 347 aa6.26□□□□□ -1.41
TMC1-202ENST00000340019 NDUFA3O95167 84 aa6.26□□□□□ -1.41
TMC1-202ENST00000340019 SPDEFO95238 335 aa6.26□□□□□ -1.41
TMC1-202ENST00000340019 BRS3P32247 399 aa6.26□□□□□ -1.41
TMC1-202ENST00000340019 F2RL1P55085 397 aa6.26□□□□□ -1.41
TMC1-202ENST00000340019 FAM120AOSQ5T036 256 aa6.26□□□□□ -1.41
TMC1-202ENST00000340019 TEX45Q8NA69 505 aa6.26□□□□□ -1.41
TMC1-202ENST00000340019 OR4A16Q8NH70 328 aa6.26□□□□□ -1.41
TMC1-202ENST00000340019 GRPEL2Q8TAA5 225 aa6.26□□□□□ -1.41
TMC1-202ENST00000340019 THAP6Q8TBB0 222 aa6.26□□□□□ -1.41
TMC1-202ENST00000340019 PIFOQ8TCI5 191 aa6.26□□□□□ -1.41
TMC1-202ENST00000340019 TSNAXQ99598 290 aaKnown RBP6.26□□□□□ -1.41
TMC1-202ENST00000340019 PLSCR3Q9NRY6 295 aa6.26□□□□□ -1.41
TMC1-202ENST00000340019 LSM5Q9Y4Y9 91 aaKnown RBP6.26□□□□□ -1.41
TMC1-202ENST00000340019 TLN2Q9Y4G6 2542 aa6.26□□□□□ -1.41
TMC1-202ENST00000340019 FAM106CPP0CH98 169 aa6.26□□□□□ -1.41
TMC1-202ENST00000340019 VMA21Q3ZAQ7 101 aa6.26□□□□□ -1.41
TMC1-202ENST00000340019 LAMTOR1Q6IAA8 161 aa6.26□□□□□ -1.41
TMC1-202ENST00000340019 C9orf62Q8N4C0 152 aa6.26□□□□□ -1.41
TMC1-202ENST00000340019 MAGT1Q9H0U3 335 aa6.26□□□□□ -1.41
TMC1-202ENST00000340019 TPSG1Q9NRR2 321 aa6.26□□□□□ -1.41
TMC1-202ENST00000340019 TNFSF18Q9UNG2 199 aa6.26□□□□□ -1.41
TMC1-202ENST00000340019 ZNF257Q9Y2Q1 563 aa6.26□□□□□ -1.41
TMC1-202ENST00000340019 SIGLEC9Q9Y336 463 aa6.26□□□□□ -1.41
TMC1-202ENST00000340019 MXRA5Q9NR99 2828 aa6.25□□□□□ -1.41
TMC1-202ENST00000340019 FXYD6-FXYD2A0A087WZ82 144 aa6.25□□□□□ -1.41
TMC1-202ENST00000340019 RRHO14718 337 aa6.25□□□□□ -1.41
TMC1-202ENST00000340019 SNAPC5O75971 98 aa6.25□□□□□ -1.41
TMC1-202ENST00000340019 TMEM50AO95807 157 aa6.25□□□□□ -1.41
TMC1-202ENST00000340019 FBP1P09467 338 aa6.25□□□□□ -1.41
TMC1-202ENST00000340019 PAX9P55771 341 aa6.25□□□□□ -1.41
TMC1-202ENST00000340019 ZNF546Q86UE3 836 aa6.25□□□□□ -1.41
TMC1-202ENST00000340019 BCL6BQ8N143 479 aaPredicted RBP6.25□□□□□ -1.41
TMC1-202ENST00000340019 ZNF430Q9H8G1 570 aaPredicted RBP6.25□□□□□ -1.41
TMC1-202ENST00000340019 CACFD1Q9UGQ2 172 aa6.25□□□□□ -1.41
TMC1-202ENST00000340019 PRNDQ9UKY0 176 aa6.25□□□□□ -1.41
TMC1-202ENST00000340019 PLXNB1O43157 2135 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms