RNA–Protein interactions for RNA: ENST00000339497.7

CCNY-202, Transcript of cyclin Y, humanhuman

TSL 1 (best) BASIC

Gene CCNY, Length 4,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNY-202ENST00000339497 OR9G1Q8NH87 305 aa13.53□□□□□ -0.24
CCNY-202ENST00000339497 ZNF524Q96C55 264 aa13.53□□□□□ -0.24
CCNY-202ENST00000339497 TRBV6-7A0A0A0MS04 114 aa13.52□□□□□ -0.24
CCNY-202ENST00000339497 SMIM6P0DI80 62 aa13.52□□□□□ -0.24
CCNY-202ENST00000339497 ZNF788Q6ZQV5 615 aa13.52□□□□□ -0.24
CCNY-202ENST00000339497 PNRC2Q9NPJ4 139 aaKnown RBP13.52□□□□□ -0.24
CCNY-202ENST00000339497 IGKV3D-15A0A087WSY6 115 aa13.52□□□□□ -0.24
CCNY-202ENST00000339497 PTBP3O95758 552 aaKnown RBP13.52□□□□□ -0.24
CCNY-202ENST00000339497 SMIM17P0DL12 118 aa13.52□□□□□ -0.24
CCNY-202ENST00000339497 HNRNPA3P51991 378 aaKnown RBP13.52□□□□□ -0.24
CCNY-202ENST00000339497 ZNF137PP52743 207 aa13.52□□□□□ -0.24
CCNY-202ENST00000339497 HIST3H3Q16695 136 aa13.52□□□□□ -0.24
CCNY-202ENST00000339497 C5orf17Q8NAS9 161 aa13.52□□□□□ -0.24
CCNY-202ENST00000339497 TGIF2-C20orf24A0A0A6YYL0 155 aa13.52□□□□□ -0.25
CCNY-202ENST00000339497 GFRA1P56159 465 aa13.52□□□□□ -0.25
CCNY-202ENST00000339497 SELENOTP62341 195 aa13.52□□□□□ -0.25
CCNY-202ENST00000339497 PQLC2Q6ZP29 291 aa13.52□□□□□ -0.25
CCNY-202ENST00000339497 BIVMQ86UB2 503 aa13.52□□□□□ -0.25
CCNY-202ENST00000339497 OR4C13Q8NGP0 309 aa13.52□□□□□ -0.25
CCNY-202ENST00000339497 HIGD1AQ9Y241 93 aa13.52□□□□□ -0.25
CCNY-202ENST00000339497 HIST1H1BP16401 226 aaKnown RBP13.52□□□□□ -0.25
CCNY-202ENST00000339497 DLL1O00548 723 aa13.51□□□□□ -0.25
CCNY-202ENST00000339497 ORM1P02763 201 aa13.51□□□□□ -0.25
CCNY-202ENST00000339497 FOXF2Q12947 444 aa13.51□□□□□ -0.25
CCNY-202ENST00000339497 GRAMD2BQ96HH9 432 aa13.51□□□□□ -0.25
CCNY-202ENST00000339497 NAT1P18440 290 aa13.51□□□□□ -0.25
CCNY-202ENST00000339497 F8VVB4 439 aa13.51□□□□□ -0.25
CCNY-202ENST00000339497 F8VWA3 439 aa13.51□□□□□ -0.25
CCNY-202ENST00000339497 BSPH1Q075Z2 132 aa13.51□□□□□ -0.25
CCNY-202ENST00000339497 NPIPB3Q92617 1050 aa13.51□□□□□ -0.25
CCNY-202ENST00000339497 PARLQ9H300 379 aa13.51□□□□□ -0.25
CCNY-202ENST00000339497 KCNMB2Q9Y691 235 aa13.51□□□□□ -0.25
CCNY-202ENST00000339497 PLXND1Q9Y4D7 1925 aa13.51□□□□□ -0.25
CCNY-202ENST00000339497 H3BTX0 84 aa13.51□□□□□ -0.25
CCNY-202ENST00000339497 HIST1H1EP10412 219 aaKnown RBP13.51□□□□□ -0.25
CCNY-202ENST00000339497 SGK494Q96LW2 274 aa13.51□□□□□ -0.25
CCNY-202ENST00000339497 P2RX4Q99571 388 aa13.51□□□□□ -0.25
CCNY-202ENST00000339497 ZNF430Q9H8G1 570 aaPredicted RBP13.51□□□□□ -0.25
CCNY-202ENST00000339497 PGPA6NDG6 321 aa13.5□□□□□ -0.25
CCNY-202ENST00000339497 SS18L1O75177 396 aaPredicted RBP13.5□□□□□ -0.25
CCNY-202ENST00000339497 ZNF343Q6P1L6 599 aa13.5□□□□□ -0.25
CCNY-202ENST00000339497 C5orf24Q7Z6I8 188 aa13.5□□□□□ -0.25
CCNY-202ENST00000339497 SCNM1Q9BWG6 230 aa13.5□□□□□ -0.25
CCNY-202ENST00000339497 TMEM106BQ9NUM4 274 aa13.5□□□□□ -0.25
CCNY-202ENST00000339497 TMEM56-RWDD3S4R434 201 aa13.5□□□□□ -0.25
CCNY-202ENST00000339497 M0R2Z0 102 aa13.5□□□□□ -0.25
CCNY-202ENST00000339497 OR5AL1P0C617 328 aa13.5□□□□□ -0.25
CCNY-202ENST00000339497 PRNTQ86SH4 94 aa13.5□□□□□ -0.25
CCNY-202ENST00000339497 PSMG3Q9BT73 122 aaPredicted RBP13.5□□□□□ -0.25
CCNY-202ENST00000339497 CA2P00918 260 aa13.49□□□□□ -0.25
CCNY-202ENST00000339497 CRYBB3P26998 211 aa13.49□□□□□ -0.25
CCNY-202ENST00000339497 SUPT4H1P63272 117 aaKnown RBP13.49□□□□□ -0.25
CCNY-202ENST00000339497 NHLH1Q02575 133 aa13.49□□□□□ -0.25
CCNY-202ENST00000339497 TMEM183BQ1AE95 376 aa13.49□□□□□ -0.25
CCNY-202ENST00000339497 PEAR1Q5VY43 1037 aaPredicted RBP13.49□□□□□ -0.25
CCNY-202ENST00000339497 FAM57AQ8TBR7 257 aa13.49□□□□□ -0.25
CCNY-202ENST00000339497 HIST1H2BAQ96A08 127 aa13.49□□□□□ -0.25
CCNY-202ENST00000339497 EAF1Q96JC9 268 aaPredicted RBP13.49□□□□□ -0.25
CCNY-202ENST00000339497 ATXN7O15265 892 aaPredicted RBP13.49□□□□□ -0.25
CCNY-202ENST00000339497 COX19Q49B96 90 aa13.49□□□□□ -0.25
CCNY-202ENST00000339497 WDR82Q6UXN9 313 aa13.49□□□□□ -0.25
CCNY-202ENST00000339497 PNKDQ8N490 385 aa13.49□□□□□ -0.25
CCNY-202ENST00000339497 NHLRC2Q8NBF2 726 aa13.49□□□□□ -0.25
CCNY-202ENST00000339497 NABP2Q9BQ15 211 aa13.49□□□□□ -0.25
CCNY-202ENST00000339497 DNAJC4Q9NNZ3 241 aa13.49□□□□□ -0.25
CCNY-202ENST00000339497 UFC1Q9Y3C8 167 aa13.49□□□□□ -0.25
CCNY-202ENST00000339497 MUC6Q6W4X9 2439 aa13.49□□□□□ -0.25
CCNY-202ENST00000339497 ZNF383Q8NA42 475 aa13.49□□□□□ -0.25
CCNY-202ENST00000339497 F5H697 171 aa13.49□□□□□ -0.25
CCNY-202ENST00000339497 RRHO14718 337 aa13.49□□□□□ -0.25
CCNY-202ENST00000339497 LRP11Q86VZ4 500 aa13.49□□□□□ -0.25
CCNY-202ENST00000339497 LHFPL1Q86WI0 220 aa13.49□□□□□ -0.25
CCNY-202ENST00000339497 STPG3Q8N7X2 389 aa13.49□□□□□ -0.25
CCNY-202ENST00000339497 TMEM186Q96B77 213 aa13.49□□□□□ -0.25
CCNY-202ENST00000339497 LRRK1Q38SD2 2015 aa13.48□□□□□ -0.25
CCNY-202ENST00000339497 MPZP25189 248 aa13.48□□□□□ -0.25
CCNY-202ENST00000339497 VAMP3Q15836 100 aa13.48□□□□□ -0.25
CCNY-202ENST00000339497 TXNDC17Q9BRA2 123 aa13.48□□□□□ -0.25
CCNY-202ENST00000339497 ZNF581Q9P0T4 197 aa13.48□□□□□ -0.25
CCNY-202ENST00000339497 RALYQ9UKM9 306 aaKnown RBP13.48□□□□□ -0.25
CCNY-202ENST00000339497 A0A087X0M5 115 aa13.48□□□□□ -0.25
CCNY-202ENST00000339497 A0A1B0GX30 115 aa13.48□□□□□ -0.25
CCNY-202ENST00000339497 DNASE2O00115 360 aaPredicted RBP13.48□□□□□ -0.25
CCNY-202ENST00000339497 C8orf88P0DMB2 117 aa13.48□□□□□ -0.25
CCNY-202ENST00000339497 SFTPCP11686 197 aa13.48□□□□□ -0.25
CCNY-202ENST00000339497 CCKARP32238 428 aa13.48□□□□□ -0.25
CCNY-202ENST00000339497 TFF3Q07654 80 aa13.48□□□□□ -0.25
CCNY-202ENST00000339497 ELOVL5Q9NYP7 299 aa13.48□□□□□ -0.25
CCNY-202ENST00000339497 SPG11Q96JI7 2443 aa13.48□□□□□ -0.25
CCNY-202ENST00000339497 KBTBD11-OT1A0A1B0GTJ5 212 aa13.48□□□□□ -0.25
CCNY-202ENST00000339497 B9A039 149 aa13.48□□□□□ -0.25
CCNY-202ENST00000339497 E9PQ18 207 aa13.48□□□□□ -0.25
CCNY-202ENST00000339497 FXYD3Q14802 87 aa13.48□□□□□ -0.25
CCNY-202ENST00000339497 C18orf12Q96KH6 178 aa13.48□□□□□ -0.25
CCNY-202ENST00000339497 NPCDR1Q9BY65 106 aa13.48□□□□□ -0.25
CCNY-202ENST00000339497 TICRRQ7Z2Z1 1910 aa13.47□□□□□ -0.25
CCNY-202ENST00000339497 IGHV3-35A0A0C4DH35 117 aa13.47□□□□□ -0.25
CCNY-202ENST00000339497 LRRC75BQ2VPJ9 315 aa13.47□□□□□ -0.25
CCNY-202ENST00000339497 IBA57Q5T440 356 aaKnown RBP13.47□□□□□ -0.25
CCNY-202ENST00000339497 CLEC7AQ9BXN2 247 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms