RNA–Protein interactions for RNA: ENST00000339113.8

ATAD3A-201, Transcript of ATPase family, AAA domain containing 3A, humanhuman

TSL 2

Gene ATAD3A, Length 2,330 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATAD3A-201ENST00000339113 C4orf17Q53FE4 359 aa14.09□□□□□ -0.15
ATAD3A-201ENST00000339113 KHDC3LQ587J8 217 aa14.09□□□□□ -0.15
ATAD3A-201ENST00000339113 TMEM200BQ69YZ2 307 aa14.09□□□□□ -0.15
ATAD3A-201ENST00000339113 ZNF439Q8NDP4 499 aa14.09□□□□□ -0.15
ATAD3A-201ENST00000339113 NIPSNAP3BQ9BS92 247 aa14.09□□□□□ -0.15
ATAD3A-201ENST00000339113 ABHD14AQ9BUJ0 271 aa14.09□□□□□ -0.15
ATAD3A-201ENST00000339113 MMP24Q9Y5R2 645 aa14.09□□□□□ -0.15
ATAD3A-201ENST00000339113 LINC00312Q9Y6C7 94 aa14.09□□□□□ -0.15
ATAD3A-201ENST00000339113 ELOA3CA0A087WX78 387 aaPredicted RBP14.08□□□□□ -0.16
ATAD3A-201ENST00000339113 TRAV1-1A0A0B4J248 108 aa14.08□□□□□ -0.16
ATAD3A-201ENST00000339113 DVL1O14640 695 aa14.08□□□□□ -0.16
ATAD3A-201ENST00000339113 VAMP2P63027 116 aa14.08□□□□□ -0.16
ATAD3A-201ENST00000339113 TLE4Q04727 773 aa14.08□□□□□ -0.16
ATAD3A-201ENST00000339113 HAGHQ16775 308 aa14.08□□□□□ -0.16
ATAD3A-201ENST00000339113 TMEM242Q9NWH2 141 aa14.08□□□□□ -0.16
ATAD3A-201ENST00000339113 ZNRD1Q9P1U0 126 aa14.08□□□□□ -0.16
ATAD3A-201ENST00000339113 WSB1Q9Y6I7 421 aa14.08□□□□□ -0.16
ATAD3A-201ENST00000339113 TRBV23-1A0A0A0MS06 115 aa14.08□□□□□ -0.16
ATAD3A-201ENST00000339113 A0A1B0GV50 99 aa14.08□□□□□ -0.16
ATAD3A-201ENST00000339113 GNG10P50151 68 aa14.08□□□□□ -0.16
ATAD3A-201ENST00000339113 NDUFA6P56556 154 aa14.08□□□□□ -0.16
ATAD3A-201ENST00000339113 IGSF10Q6WRI0 2623 aa14.08□□□□□ -0.16
ATAD3A-201ENST00000339113 OR5C1Q8NGR4 320 aa14.08□□□□□ -0.16
ATAD3A-201ENST00000339113 H1FXQ92522 213 aaKnown RBP14.08□□□□□ -0.16
ATAD3A-201ENST00000339113 RPUSD1Q9UJJ7 312 aaKnown RBP14.08□□□□□ -0.16
ATAD3A-201ENST00000339113 A0A1W2PPR1 153 aa14.07□□□□□ -0.16
ATAD3A-201ENST00000339113 ZNF727A8MUV8 499 aa14.07□□□□□ -0.16
ATAD3A-201ENST00000339113 H3BP45 60 aa14.07□□□□□ -0.16
ATAD3A-201ENST00000339113 TGOLN2O43493 480 aa14.07□□□□□ -0.16
ATAD3A-201ENST00000339113 NDUFB3O43676 98 aa14.07□□□□□ -0.16
ATAD3A-201ENST00000339113 HIST1H2BKO60814 126 aa14.07□□□□□ -0.16
ATAD3A-201ENST00000339113 CST7O76096 145 aa14.07□□□□□ -0.16
ATAD3A-201ENST00000339113 LY6HO94772 140 aa14.07□□□□□ -0.16
ATAD3A-201ENST00000339113 HIST1H2BJP06899 126 aa14.07□□□□□ -0.16
ATAD3A-201ENST00000339113 HIST1H2BOP23527 126 aa14.07□□□□□ -0.16
ATAD3A-201ENST00000339113 HIST1H2BBP33778 126 aa14.07□□□□□ -0.16
ATAD3A-201ENST00000339113 PLA2G5P39877 138 aa14.07□□□□□ -0.16
ATAD3A-201ENST00000339113 HIST1H2BDP58876 126 aa14.07□□□□□ -0.16
ATAD3A-201ENST00000339113 HIST1H2BCP62807 126 aa14.07□□□□□ -0.16
ATAD3A-201ENST00000339113 HIST2H2BEQ16778 126 aa14.07□□□□□ -0.16
ATAD3A-201ENST00000339113 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.07□□□□□ -0.16
ATAD3A-201ENST00000339113 CLDND2Q8NHS1 167 aa14.07□□□□□ -0.16
ATAD3A-201ENST00000339113 HIST1H2BHQ93079 126 aa14.07□□□□□ -0.16
ATAD3A-201ENST00000339113 HIST1H2BNQ99877 126 aa14.07□□□□□ -0.16
ATAD3A-201ENST00000339113 HIST1H2BMQ99879 126 aa14.07□□□□□ -0.16
ATAD3A-201ENST00000339113 ITGB1BP1O14713 200 aa14.07□□□□□ -0.16
ATAD3A-201ENST00000339113 FCGR3BO75015 233 aa14.07□□□□□ -0.16
ATAD3A-201ENST00000339113 SOD3P08294 240 aa14.07□□□□□ -0.16
ATAD3A-201ENST00000339113 CXCL1P09341 107 aa14.07□□□□□ -0.16
ATAD3A-201ENST00000339113 ZNF674Q2M3X9 581 aa14.07□□□□□ -0.16
ATAD3A-201ENST00000339113 CYB561D1Q8N8Q1 229 aa14.07□□□□□ -0.16
ATAD3A-201ENST00000339113 PFDN5Q99471 154 aa14.07□□□□□ -0.16
ATAD3A-201ENST00000339113 RAB9BQ9NP90 201 aa14.07□□□□□ -0.16
ATAD3A-201ENST00000339113 KAAG1Q9UBP8 84 aa14.07□□□□□ -0.16
ATAD3A-201ENST00000339113 YLPM1P49750 1951 aaKnown RBP14.06□□□□□ -0.16
ATAD3A-201ENST00000339113 SAA2-SAA4A0A096LPE2 208 aa14.06□□□□□ -0.16
ATAD3A-201ENST00000339113 SYNGR2O43760 224 aa14.06□□□□□ -0.16
ATAD3A-201ENST00000339113 SAA2P0DJI9 122 aaPredicted RBP14.06□□□□□ -0.16
ATAD3A-201ENST00000339113 IAPPP10997 89 aa14.06□□□□□ -0.16
ATAD3A-201ENST00000339113 HIST1H1BP16401 226 aaKnown RBP14.06□□□□□ -0.16
ATAD3A-201ENST00000339113 MEF2CQ06413 473 aaPredicted RBP14.06□□□□□ -0.16
ATAD3A-201ENST00000339113 TCTEX1D1Q8N7M0 179 aa14.06□□□□□ -0.16
ATAD3A-201ENST00000339113 RAB7AP51149 207 aa14.06□□□□□ -0.16
ATAD3A-201ENST00000339113 LRRC10Q5BKY1 277 aa14.06□□□□□ -0.16
ATAD3A-201ENST00000339113 AKR1C8PQ5T2L2 129 aa14.06□□□□□ -0.16
ATAD3A-201ENST00000339113 LYG1Q8N1E2 194 aa14.06□□□□□ -0.16
ATAD3A-201ENST00000339113 FAM216AQ8WUB2 273 aa14.06□□□□□ -0.16
ATAD3A-201ENST00000339113 RFNGQ9Y644 331 aa14.06□□□□□ -0.16
ATAD3A-201ENST00000339113 C19orf84I3L1E1 186 aa14.05□□□□□ -0.16
ATAD3A-201ENST00000339113 PPOXP50336 477 aa14.05□□□□□ -0.16
ATAD3A-201ENST00000339113 DYNLT3P51808 116 aa14.05□□□□□ -0.16
ATAD3A-201ENST00000339113 PNRC1Q12796 327 aaPredicted RBP14.05□□□□□ -0.16
ATAD3A-201ENST00000339113 TMEM217Q8N7C4 229 aa14.05□□□□□ -0.16
ATAD3A-201ENST00000339113 GAB2Q9UQC2 676 aa14.05□□□□□ -0.16
ATAD3A-201ENST00000339113 TAS2R30P59541 319 aa14.04□□□□□ -0.16
ATAD3A-201ENST00000339113 C11orf71Q6IPW1 123 aa14.04□□□□□ -0.16
ATAD3A-201ENST00000339113 ZNF343Q6P1L6 599 aa14.04□□□□□ -0.16
ATAD3A-201ENST00000339113 DDB2Q92466 427 aa14.04□□□□□ -0.16
ATAD3A-201ENST00000339113 ZNF714Q96N38 554 aa14.04□□□□□ -0.16
ATAD3A-201ENST00000339113 ATP5SQ99766 215 aa14.04□□□□□ -0.16
ATAD3A-201ENST00000339113 MARCH11A6NNE9 402 aa14.04□□□□□ -0.16
ATAD3A-201ENST00000339113 PPP1R2P9O14990 202 aa14.04□□□□□ -0.16
ATAD3A-201ENST00000339113 RND2P52198 227 aa14.04□□□□□ -0.16
ATAD3A-201ENST00000339113 MRPS11P82912 194 aaKnown RBP14.04□□□□□ -0.16
ATAD3A-201ENST00000339113 DEFA6Q01524 100 aa14.04□□□□□ -0.16
ATAD3A-201ENST00000339113 SLC25A48Q6ZT89 311 aaKnown RBP14.04□□□□□ -0.16
ATAD3A-201ENST00000339113 VKORC1L1Q8N0U8 176 aa14.04□□□□□ -0.16
ATAD3A-201ENST00000339113 HIST3H2BBQ8N257 126 aa14.04□□□□□ -0.16
ATAD3A-201ENST00000339113 ZNF383Q8NA42 475 aa14.04□□□□□ -0.16
ATAD3A-201ENST00000339113 R3HDM4Q96D70 268 aa14.04□□□□□ -0.16
ATAD3A-201ENST00000339113 RAB40CQ96S21 281 aa14.04□□□□□ -0.16
ATAD3A-201ENST00000339113 PRDM13Q9H4Q3 707 aa14.04□□□□□ -0.16
ATAD3A-201ENST00000339113 CBLN4Q9NTU7 201 aa14.04□□□□□ -0.16
ATAD3A-201ENST00000339113 RAB29O14966 203 aa14.03□□□□□ -0.16
ATAD3A-201ENST00000339113 DFFBO76075 338 aa14.03□□□□□ -0.16
ATAD3A-201ENST00000339113 GPX4P36969 197 aaPredicted RBP14.03□□□□□ -0.16
ATAD3A-201ENST00000339113 RPL23AP62750 156 aaKnown RBP14.03□□□□□ -0.16
ATAD3A-201ENST00000339113 TMEM267Q0VDI3 215 aaPredicted RBP14.03□□□□□ -0.16
ATAD3A-201ENST00000339113 SPNS3Q6ZMD2 512 aa14.03□□□□□ -0.16
ATAD3A-201ENST00000339113 H2BFWTQ7Z2G1 175 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms