RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 DUTP33316 252 aaKnown RBP11.78□□□□□ -0.52
LINC01116-202ENST00000339037 GUCA2BQ16661 112 aa11.78□□□□□ -0.52
LINC01116-202ENST00000339037 DEFB114Q30KQ6 69 aa11.78□□□□□ -0.52
LINC01116-202ENST00000339037 C15orf32Q32M92 178 aa11.78□□□□□ -0.52
LINC01116-202ENST00000339037 CDNFQ49AH0 187 aa11.78□□□□□ -0.52
LINC01116-202ENST00000339037 FAM209BQ5JX69 171 aa11.78□□□□□ -0.52
LINC01116-202ENST00000339037 NUDCD2Q8WVJ2 157 aa11.78□□□□□ -0.52
LINC01116-202ENST00000339037 ZNF430Q9H8G1 570 aaPredicted RBP11.78□□□□□ -0.52
LINC01116-202ENST00000339037 ZC4H2Q9NQZ6 224 aa11.78□□□□□ -0.52
LINC01116-202ENST00000339037 C2orf70A6NJV1 201 aa11.77□□□□□ -0.53
LINC01116-202ENST00000339037 FOLR2P14207 255 aa11.77□□□□□ -0.53
LINC01116-202ENST00000339037 DTYMKP23919 212 aa11.77□□□□□ -0.53
LINC01116-202ENST00000339037 CDK10Q15131 360 aa11.77□□□□□ -0.53
LINC01116-202ENST00000339037 C10orf55Q5SWW7 151 aa11.77□□□□□ -0.53
LINC01116-202ENST00000339037 HACD4Q5VWC8 232 aa11.77□□□□□ -0.53
LINC01116-202ENST00000339037 TTC9CQ8N5M4 171 aa11.77□□□□□ -0.53
LINC01116-202ENST00000339037 LGALS14Q8TCE9 139 aa11.77□□□□□ -0.53
LINC01116-202ENST00000339037 FCGR1BQ92637 280 aa11.77□□□□□ -0.53
LINC01116-202ENST00000339037 MRPL18Q9H0U6 180 aaKnown RBP11.77□□□□□ -0.53
LINC01116-202ENST00000339037 OR51E2Q9H255 320 aa11.77□□□□□ -0.53
LINC01116-202ENST00000339037 TECRQ9NZ01 308 aaKnown RBP11.77□□□□□ -0.53
LINC01116-202ENST00000339037 DAPK2Q9UIK4 370 aa11.77□□□□□ -0.53
LINC01116-202ENST00000339037 TMEM235A6NFC5 223 aa11.76□□□□□ -0.53
LINC01116-202ENST00000339037 PPP5D1E7EU14 171 aa11.76□□□□□ -0.53
LINC01116-202ENST00000339037 J3QRK9 145 aa11.76□□□□□ -0.53
LINC01116-202ENST00000339037 OR2J3O76001 311 aa11.76□□□□□ -0.53
LINC01116-202ENST00000339037 HLA-AP01891 365 aaKnown RBP11.76□□□□□ -0.53
LINC01116-202ENST00000339037 KIR2DS2P43631 304 aa11.76□□□□□ -0.53
LINC01116-202ENST00000339037 ARL6IP1Q15041 203 aa11.76□□□□□ -0.53
LINC01116-202ENST00000339037 SFXN4Q6P4A7 337 aa11.76□□□□□ -0.53
LINC01116-202ENST00000339037 SLC16A13Q7RTY0 426 aa11.76□□□□□ -0.53
LINC01116-202ENST00000339037 SLC25A42Q86VD7 318 aa11.76□□□□□ -0.53
LINC01116-202ENST00000339037 MMD2Q8IY49 270 aa11.76□□□□□ -0.53
LINC01116-202ENST00000339037 DCUN1D5Q9BTE7 237 aa11.76□□□□□ -0.53
LINC01116-202ENST00000339037 CENPOQ9BU64 300 aa11.76□□□□□ -0.53
LINC01116-202ENST00000339037 ST6GALNAC5Q9BVH7 336 aa11.76□□□□□ -0.53
LINC01116-202ENST00000339037 RNF167Q9H6Y7 350 aa11.76□□□□□ -0.53
LINC01116-202ENST00000339037 RRP15Q9Y3B9 282 aaKnown RBP11.76□□□□□ -0.53
LINC01116-202ENST00000339037 SSX5O60225 188 aa11.75□□□□□ -0.53
LINC01116-202ENST00000339037 GGCTO75223 188 aaKnown RBP11.75□□□□□ -0.53
LINC01116-202ENST00000339037 CLEC2LP0C7M8 214 aa11.75□□□□□ -0.53
LINC01116-202ENST00000339037 EDN2P20800 178 aa11.75□□□□□ -0.53
LINC01116-202ENST00000339037 NFYAP23511 347 aaPredicted RBP11.75□□□□□ -0.53
LINC01116-202ENST00000339037 TPRA1Q86W33 373 aa11.75□□□□□ -0.53
LINC01116-202ENST00000339037 ZNF645Q8N7E2 425 aa11.75□□□□□ -0.53
LINC01116-202ENST00000339037 Q9H521 79 aa11.75□□□□□ -0.53
LINC01116-202ENST00000339037 SSR3Q9UNL2 185 aa11.75□□□□□ -0.53
LINC01116-202ENST00000339037 ZNF257Q9Y2Q1 563 aa11.75□□□□□ -0.53
LINC01116-202ENST00000339037 IGKV1D-13A0A0B4J2D9 117 aa11.74□□□□□ -0.53
LINC01116-202ENST00000339037 LGALS9O00182 355 aa11.74□□□□□ -0.53
LINC01116-202ENST00000339037 FCGR3BO75015 233 aa11.74□□□□□ -0.53
LINC01116-202ENST00000339037 OR2C1O95371 312 aa11.74□□□□□ -0.53
LINC01116-202ENST00000339037 IGLV2-14P01704 120 aa11.74□□□□□ -0.53
LINC01116-202ENST00000339037 IGKV1-13P0DP09 117 aa11.74□□□□□ -0.53
LINC01116-202ENST00000339037 SDC2P34741 201 aa11.74□□□□□ -0.53
LINC01116-202ENST00000339037 ID3Q02535 119 aa11.74□□□□□ -0.53
LINC01116-202ENST00000339037 MXD1Q05195 221 aa11.74□□□□□ -0.53
LINC01116-202ENST00000339037 ZNF773Q6PK81 442 aa11.74□□□□□ -0.53
LINC01116-202ENST00000339037 KCTD9Q7L273 389 aa11.74□□□□□ -0.53
LINC01116-202ENST00000339037 YTHDF1Q9BYJ9 559 aaKnown RBP11.74□□□□□ -0.53
LINC01116-202ENST00000339037 DCSTAMPQ9H295 470 aa11.74□□□□□ -0.53
LINC01116-202ENST00000339037 RHBDL2Q9NX52 303 aa11.74□□□□□ -0.53
LINC01116-202ENST00000339037 MRPS7Q9Y2R9 242 aaKnown RBP11.74□□□□□ -0.53
LINC01116-202ENST00000339037 PRELID3BQ9Y3B1 194 aa11.74□□□□□ -0.53
LINC01116-202ENST00000339037 OR2W1Q9Y3N9 320 aa11.74□□□□□ -0.53
LINC01116-202ENST00000339037 DPPA5A6NC42 116 aa11.73□□□□□ -0.53
LINC01116-202ENST00000339037 F8W735 103 aaPredicted RBP11.73□□□□□ -0.53
LINC01116-202ENST00000339037 HLA-DQB1P01920 261 aa11.73□□□□□ -0.53
LINC01116-202ENST00000339037 CD36P16671 472 aa11.73□□□□□ -0.53
LINC01116-202ENST00000339037 CBLN1P23435 193 aa11.73□□□□□ -0.53
LINC01116-202ENST00000339037 GNG2P59768 71 aa11.73□□□□□ -0.53
LINC01116-202ENST00000339037 RPL30P62888 115 aaKnown RBP11.73□□□□□ -0.53
LINC01116-202ENST00000339037 OR2B11Q5JQS5 317 aa11.73□□□□□ -0.53
LINC01116-202ENST00000339037 C19orf35Q6ZS72 473 aa11.73□□□□□ -0.53
LINC01116-202ENST00000339037 TMEM61Q8N0U2 210 aa11.73□□□□□ -0.53
LINC01116-202ENST00000339037 VKORC1L1Q8N0U8 176 aa11.73□□□□□ -0.53
LINC01116-202ENST00000339037 OR5H6Q8NGV6 325 aa11.73□□□□□ -0.53
LINC01116-202ENST00000339037 CACNG8Q8WXS5 425 aa11.73□□□□□ -0.53
LINC01116-202ENST00000339037 LINC00476Q8WZB0 136 aa11.73□□□□□ -0.53
LINC01116-202ENST00000339037 SLC25A38Q96DW6 304 aa11.73□□□□□ -0.53
LINC01116-202ENST00000339037 FBXL7Q9UJT9 491 aa11.73□□□□□ -0.53
LINC01116-202ENST00000339037 RBMX2Q9Y388 322 aaKnown RBP11.73□□□□□ -0.53
LINC01116-202ENST00000339037 DMRT1Q9Y5R6 373 aa11.73□□□□□ -0.53
LINC01116-202ENST00000339037 KMT2AQ03164 3969 aa11.72□□□□□ -0.53
LINC01116-202ENST00000339037 LOC100506127A0A0U1RQW1 187 aa11.72□□□□□ -0.53
LINC01116-202ENST00000339037 HMX3A6NHT5 357 aa11.72□□□□□ -0.53
LINC01116-202ENST00000339037 NPIPB5A8MRT5 1133 aa11.72□□□□□ -0.53
LINC01116-202ENST00000339037 TEX22C9J3V5 150 aa11.72□□□□□ -0.53
LINC01116-202ENST00000339037 SCGNO76038 276 aa11.72□□□□□ -0.53
LINC01116-202ENST00000339037 CTXN2P0C2S0 81 aa11.72□□□□□ -0.53
LINC01116-202ENST00000339037 ARL3P36405 182 aa11.72□□□□□ -0.53
LINC01116-202ENST00000339037 ZNF57Q68EA5 555 aaPredicted RBP11.72□□□□□ -0.53
LINC01116-202ENST00000339037 CNIH2Q6PI25 160 aa11.72□□□□□ -0.53
LINC01116-202ENST00000339037 GPHB5Q86YW7 130 aa11.72□□□□□ -0.53
LINC01116-202ENST00000339037 OR52B4Q8NGK2 314 aa11.72□□□□□ -0.53
LINC01116-202ENST00000339037 VSTM2AQ8TAG5 236 aa11.72□□□□□ -0.53
LINC01116-202ENST00000339037 ANAPC16Q96DE5 110 aa11.72□□□□□ -0.53
LINC01116-202ENST00000339037 CCDC140Q96MF4 163 aa11.72□□□□□ -0.53
LINC01116-202ENST00000339037 GGTLC1Q9BX51 225 aa11.72□□□□□ -0.53
LINC01116-202ENST00000339037 ANXA10Q9UJ72 324 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms