RNA–Protein interactions for RNA: ENST00000336840.10

PAX3-202, Transcript of paired box 3, humanhuman

TSL 1 (best) BASIC

Gene PAX3, Length 2,038 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX3-202ENST00000336840 PAX6P26367 422 aa10.11□□□□□ -0.79
PAX3-202ENST00000336840 UBE2KP61086 200 aa10.11□□□□□ -0.79
PAX3-202ENST00000336840 BRD3OSQ6XYD6 125 aa10.11□□□□□ -0.79
PAX3-202ENST00000336840 ZNF429Q86V71 674 aa10.11□□□□□ -0.79
PAX3-202ENST00000336840 C9orf62Q8N4C0 152 aa10.11□□□□□ -0.79
PAX3-202ENST00000336840 OR4A5Q8NH83 315 aa10.11□□□□□ -0.79
PAX3-202ENST00000336840 VSTM2AQ8TAG5 236 aa10.11□□□□□ -0.79
PAX3-202ENST00000336840 HSPB7Q9UBY9 170 aa10.11□□□□□ -0.79
PAX3-202ENST00000336840 TNFSF18Q9UNG2 199 aa10.11□□□□□ -0.79
PAX3-202ENST00000336840 UPK2O00526 184 aa10.11□□□□□ -0.79
PAX3-202ENST00000336840 KBTBD11O94819 623 aa10.11□□□□□ -0.79
PAX3-202ENST00000336840 IGKV1D-33P01593 117 aa10.11□□□□□ -0.79
PAX3-202ENST00000336840 IGKV1-33P01594 117 aa10.11□□□□□ -0.79
PAX3-202ENST00000336840 RLN2P04090 185 aa10.11□□□□□ -0.79
PAX3-202ENST00000336840 BPIFB3P59826 476 aa10.11□□□□□ -0.79
PAX3-202ENST00000336840 OR2B8PP59922 312 aa10.11□□□□□ -0.79
PAX3-202ENST00000336840 POLR2GP62487 172 aaKnown RBP eCLIP10.11□□□□□ -0.79
PAX3-202ENST00000336840 TNFRSF9Q07011 255 aa10.11□□□□□ -0.79
PAX3-202ENST00000336840 EBI3Q14213 229 aa10.11□□□□□ -0.79
PAX3-202ENST00000336840 VMA21Q3ZAQ7 101 aa10.11□□□□□ -0.79
PAX3-202ENST00000336840 OR4A16Q8NH70 328 aa10.11□□□□□ -0.79
PAX3-202ENST00000336840 TMEM167AQ8TBQ9 72 aa10.11□□□□□ -0.79
PAX3-202ENST00000336840 TSNAXQ99598 290 aaKnown RBP10.11□□□□□ -0.79
PAX3-202ENST00000336840 TMEM14BQ9NUH8 114 aa10.11□□□□□ -0.79
PAX3-202ENST00000336840 CACFD1Q9UGQ2 172 aa10.11□□□□□ -0.79
PAX3-202ENST00000336840 FOXA2Q9Y261 457 aaPredicted RBP10.11□□□□□ -0.79
PAX3-202ENST00000336840 NSG2Q9Y328 171 aa10.11□□□□□ -0.79
PAX3-202ENST00000336840 ZFHX3Q15911 3703 aa10.1□□□□□ -0.79
PAX3-202ENST00000336840 PLXNB1O43157 2135 aa10.1□□□□□ -0.79
PAX3-202ENST00000336840 ANK3Q12955 4377 aaKnown RBP10.1□□□□□ -0.79
PAX3-202ENST00000336840 E5RGE8 158 aa10.1□□□□□ -0.79
PAX3-202ENST00000336840 ARPC5O15511 151 aa10.1□□□□□ -0.79
PAX3-202ENST00000336840 SNAPC5O75971 98 aa10.1□□□□□ -0.79
PAX3-202ENST00000336840 NXPH3O95157 252 aa10.1□□□□□ -0.79
PAX3-202ENST00000336840 SPDEFO95238 335 aa10.1□□□□□ -0.79
PAX3-202ENST00000336840 SNRNP70P08621 437 aaKnown RBP10.1□□□□□ -0.79
PAX3-202ENST00000336840 FGF2P09038 288 aa10.1□□□□□ -0.79
PAX3-202ENST00000336840 PDLIM3Q53GG5 364 aaPredicted RBP10.1□□□□□ -0.79
PAX3-202ENST00000336840 LAMTOR1Q6IAA8 161 aa10.1□□□□□ -0.79
PAX3-202ENST00000336840 ZNF546Q86UE3 836 aa10.1□□□□□ -0.79
PAX3-202ENST00000336840 OR2T10Q8NGZ9 312 aa10.1□□□□□ -0.79
PAX3-202ENST00000336840 OR52E5Q8NH55 327 aa10.1□□□□□ -0.79
PAX3-202ENST00000336840 DCUN1D4Q92564 292 aa10.1□□□□□ -0.79
PAX3-202ENST00000336840 QTRT1Q9BXR0 403 aaKnown RBP10.1□□□□□ -0.79
PAX3-202ENST00000336840 MEGF9Q9H1U4 602 aa10.1□□□□□ -0.79
PAX3-202ENST00000336840 TLN2Q9Y4G6 2542 aa10.1□□□□□ -0.79
PAX3-202ENST00000336840 A0A0U1RQK1 487 aa10.09□□□□□ -0.79
PAX3-202ENST00000336840 WRBO00258 174 aa10.09□□□□□ -0.79
PAX3-202ENST00000336840 SMAD7O15105 426 aaKnown RBP10.09□□□□□ -0.79
PAX3-202ENST00000336840 SYNGR2O43760 224 aa10.09□□□□□ -0.79
PAX3-202ENST00000336840 SSSCA1O60232 199 aa10.09□□□□□ -0.79
PAX3-202ENST00000336840 RBMXL2O75526 392 aaKnown RBP10.09□□□□□ -0.79
PAX3-202ENST00000336840 MOSP00540 346 aa10.09□□□□□ -0.79
PAX3-202ENST00000336840 CRYGBP07316 175 aa10.09□□□□□ -0.79
PAX3-202ENST00000336840 BRS3P32247 399 aa10.09□□□□□ -0.79
PAX3-202ENST00000336840 THNSL2Q86YJ6 484 aa10.09□□□□□ -0.79
PAX3-202ENST00000336840 Q8N6K4 173 aa10.09□□□□□ -0.79
PAX3-202ENST00000336840 TEX45Q8NA69 505 aa10.09□□□□□ -0.79
PAX3-202ENST00000336840 EAF1Q96JC9 268 aaPredicted RBP10.09□□□□□ -0.79
PAX3-202ENST00000336840 MAGT1Q9H0U3 335 aa10.09□□□□□ -0.79
PAX3-202ENST00000336840 PRNDQ9UKY0 176 aa10.09□□□□□ -0.79
PAX3-202ENST00000336840 RNF222A6NCQ9 220 aa10.09□□□□□ -0.79
PAX3-202ENST00000336840 SLC25A17O43808 307 aa10.09□□□□□ -0.79
PAX3-202ENST00000336840 MED6O75586 246 aa10.09□□□□□ -0.79
PAX3-202ENST00000336840 CXCL2P19875 107 aa10.09□□□□□ -0.79
PAX3-202ENST00000336840 PVALBP20472 110 aaPredicted RBP10.09□□□□□ -0.79
PAX3-202ENST00000336840 CNTFRP26992 372 aa10.09□□□□□ -0.79
PAX3-202ENST00000336840 DYNLT3P51808 116 aa10.09□□□□□ -0.79
PAX3-202ENST00000336840 ZNF345Q14585 488 aa10.09□□□□□ -0.79
PAX3-202ENST00000336840 PSG5Q15238 335 aa10.09□□□□□ -0.79
PAX3-202ENST00000336840 LGALSLQ3ZCW2 172 aaPredicted RBP10.09□□□□□ -0.79
PAX3-202ENST00000336840 NPBQ8NG41 125 aa10.09□□□□□ -0.79
PAX3-202ENST00000336840 RAB40CQ96S21 281 aa10.09□□□□□ -0.79
PAX3-202ENST00000336840 ZNF257Q9Y2Q1 563 aa10.09□□□□□ -0.79
PAX3-202ENST00000336840 CHST1O43916 411 aa10.08□□□□□ -0.8
PAX3-202ENST00000336840 NDUFA3O95167 84 aa10.08□□□□□ -0.8
PAX3-202ENST00000336840 P2RY1P47900 373 aa10.08□□□□□ -0.8
PAX3-202ENST00000336840 KRTAP1-1Q07627 177 aa10.08□□□□□ -0.8
PAX3-202ENST00000336840 MRGPRG-AS1Q2M3A8 158 aa10.08□□□□□ -0.8
PAX3-202ENST00000336840 FBLN7Q53RD9 439 aa10.08□□□□□ -0.8
PAX3-202ENST00000336840 AQP10Q96PS8 301 aa10.08□□□□□ -0.8
PAX3-202ENST00000336840 MFFQ9GZY8 342 aa10.08□□□□□ -0.8
PAX3-202ENST00000336840 RBKSQ9H477 322 aa10.08□□□□□ -0.8
PAX3-202ENST00000336840 FKBP11Q9NYL4 201 aa10.08□□□□□ -0.8
PAX3-202ENST00000336840 ACANP16112 2415 aa10.08□□□□□ -0.8
PAX3-202ENST00000336840 OR2F2O95006 317 aa10.07□□□□□ -0.8
PAX3-202ENST00000336840 FBP1P09467 338 aa10.07□□□□□ -0.8
PAX3-202ENST00000336840 CD24P25063 80 aa10.07□□□□□ -0.8
PAX3-202ENST00000336840 PAX9P55771 341 aa10.07□□□□□ -0.8
PAX3-202ENST00000336840 SPCS3P61009 180 aa10.07□□□□□ -0.8
PAX3-202ENST00000336840 HSPE1P61604 102 aaKnown RBP10.07□□□□□ -0.8
PAX3-202ENST00000336840 RPL8P62917 257 aaKnown RBP10.07□□□□□ -0.8
PAX3-202ENST00000336840 OR2F1Q13607 317 aa10.07□□□□□ -0.8
PAX3-202ENST00000336840 HES1Q14469 280 aa10.07□□□□□ -0.8
PAX3-202ENST00000336840 ACOT7LQ6ZUV0 252 aa10.07□□□□□ -0.8
PAX3-202ENST00000336840 INO80EQ8NBZ0 244 aaPredicted RBP10.07□□□□□ -0.8
PAX3-202ENST00000336840 NANPQ8TBE9 248 aa10.07□□□□□ -0.8
PAX3-202ENST00000336840 TPSG1Q9NRR2 321 aa10.07□□□□□ -0.8
PAX3-202ENST00000336840 NUP50Q9UKX7 468 aa10.07□□□□□ -0.8
PAX3-202ENST00000336840 SIGLEC9Q9Y336 463 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms