RNA–Protein interactions for RNA: ENST00000336057.9

HDAC5-202, Transcript of histone deacetylase 5, humanhuman

TSL 1 (best) BASIC

Gene HDAC5, Length 5,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-202ENST00000336057 RSPO3Q9BXY4 272 aaPredicted RBP13.32□□□□□ -0.28
HDAC5-202ENST00000336057 A0A087WWC5 75 aa13.32□□□□□ -0.28
HDAC5-202ENST00000336057 CECR9P0C854 216 aa13.32□□□□□ -0.28
HDAC5-202ENST00000336057 CD99P14209 185 aa13.32□□□□□ -0.28
HDAC5-202ENST00000336057 GCHFRP30047 84 aa13.32□□□□□ -0.28
HDAC5-202ENST00000336057 LHX2P50458 406 aa13.32□□□□□ -0.28
HDAC5-202ENST00000336057 ZNF525Q8N782 197 aa13.32□□□□□ -0.28
HDAC5-202ENST00000336057 FDCSPQ8NFU4 85 aa13.32□□□□□ -0.28
HDAC5-202ENST00000336057 CLEC5AQ9NY25 188 aa13.32□□□□□ -0.28
HDAC5-202ENST00000336057 UFC1Q9Y3C8 167 aa13.32□□□□□ -0.28
HDAC5-202ENST00000336057 OR2T8A6NH00 312 aa13.31□□□□□ -0.28
HDAC5-202ENST00000336057 KLF7O75840 302 aaPredicted RBP13.31□□□□□ -0.28
HDAC5-202ENST00000336057 ZIC4Q8N9L1 334 aa13.31□□□□□ -0.28
HDAC5-202ENST00000336057 FOXD3Q9UJU5 478 aaPredicted RBP13.31□□□□□ -0.28
HDAC5-202ENST00000336057 GTF3AQ92664 365 aaKnown RBP13.31□□□□□ -0.28
HDAC5-202ENST00000336057 NUBP1P53384 320 aa13.31□□□□□ -0.28
HDAC5-202ENST00000336057 SUPT4H1P63272 117 aaKnown RBP13.31□□□□□ -0.28
HDAC5-202ENST00000336057 NDUFA2O43678 99 aa13.31□□□□□ -0.28
HDAC5-202ENST00000336057 FXYD3Q14802 87 aa13.31□□□□□ -0.28
HDAC5-202ENST00000336057 OR13A1Q8NGR1 328 aa13.31□□□□□ -0.28
HDAC5-202ENST00000336057 TMSB15BA0A087X1C1 80 aa13.3□□□□□ -0.28
HDAC5-202ENST00000336057 GLRXP35754 106 aa13.3□□□□□ -0.28
HDAC5-202ENST00000336057 ATP5IP56385 69 aaPredicted RBP13.3□□□□□ -0.28
HDAC5-202ENST00000336057 VWA1Q6PCB0 445 aa13.3□□□□□ -0.28
HDAC5-202ENST00000336057 ZNF788Q6ZQV5 615 aa13.3□□□□□ -0.28
HDAC5-202ENST00000336057 LRTM2Q8N967 370 aa13.3□□□□□ -0.28
HDAC5-202ENST00000336057 OR4C13Q8NGP0 309 aa13.3□□□□□ -0.28
HDAC5-202ENST00000336057 DEPPQ9NTK1 212 aa13.3□□□□□ -0.28
HDAC5-202ENST00000336057 PLPPR1Q8TBJ4 325 aa13.3□□□□□ -0.28
HDAC5-202ENST00000336057 F5H697 171 aa13.3□□□□□ -0.28
HDAC5-202ENST00000336057 ID3Q02535 119 aa13.3□□□□□ -0.28
HDAC5-202ENST00000336057 TMEM183AQ8IXX5 376 aa13.3□□□□□ -0.28
HDAC5-202ENST00000336057 NABP1Q96AH0 204 aa13.3□□□□□ -0.28
HDAC5-202ENST00000336057 IGKV1-12A0A0C4DH73 117 aa13.3□□□□□ -0.28
HDAC5-202ENST00000336057 IGKV1D-12P01611 117 aa13.3□□□□□ -0.28
HDAC5-202ENST00000336057 TFF3Q07654 80 aa13.3□□□□□ -0.28
HDAC5-202ENST00000336057 CCL21O00585 134 aa13.29□□□□□ -0.28
HDAC5-202ENST00000336057 CA2P00918 260 aa13.29□□□□□ -0.28
HDAC5-202ENST00000336057 REG4Q9BYZ8 158 aa13.29□□□□□ -0.28
HDAC5-202ENST00000336057 EP300Q09472 2414 aaPredicted RBP13.29□□□□□ -0.28
HDAC5-202ENST00000336057 TRBV23-1A0A0A0MS06 115 aa13.29□□□□□ -0.28
HDAC5-202ENST00000336057 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.29□□□□□ -0.28
HDAC5-202ENST00000336057 IL6RP08887 468 aaPredicted RBP13.29□□□□□ -0.28
HDAC5-202ENST00000336057 RPL30P62888 115 aaKnown RBP13.29□□□□□ -0.28
HDAC5-202ENST00000336057 ZFP36L1Q07352 338 aaKnown RBP13.29□□□□□ -0.28
HDAC5-202ENST00000336057 C1orf162Q8NEQ5 155 aaPredicted RBP13.29□□□□□ -0.28
HDAC5-202ENST00000336057 GATAD1Q8WUU5 269 aa13.29□□□□□ -0.28
HDAC5-202ENST00000336057 RBM14Q96PK6 669 aaKnown RBP13.29□□□□□ -0.28
HDAC5-202ENST00000336057 SDF2L1Q9HCN8 221 aa13.29□□□□□ -0.28
HDAC5-202ENST00000336057 IQCF6A8MYZ5 107 aa13.29□□□□□ -0.28
HDAC5-202ENST00000336057 PCSK4Q6UW60 755 aa13.29□□□□□ -0.28
HDAC5-202ENST00000336057 TMEM116Q8NCL8 245 aa13.29□□□□□ -0.28
HDAC5-202ENST00000336057 OR4B1Q8NGF8 309 aa13.29□□□□□ -0.28
HDAC5-202ENST00000336057 OR9G1Q8NH87 305 aa13.29□□□□□ -0.28
HDAC5-202ENST00000336057 FGFBP3Q8TAT2 258 aa13.29□□□□□ -0.28
HDAC5-202ENST00000336057 TMEM186Q96B77 213 aa13.29□□□□□ -0.28
HDAC5-202ENST00000336057 CYTL1Q9NRR1 136 aa13.29□□□□□ -0.28
HDAC5-202ENST00000336057 AMY1AP04745 511 aa13.28□□□□□ -0.28
HDAC5-202ENST00000336057 IGHV1-2P23083 117 aa13.28□□□□□ -0.28
HDAC5-202ENST00000336057 TIMM23BQ5SRD1 257 aa13.28□□□□□ -0.28
HDAC5-202ENST00000336057 OR4D5Q8NGN0 318 aa13.28□□□□□ -0.28
HDAC5-202ENST00000336057 CELA3BP08861 270 aa13.28□□□□□ -0.28
HDAC5-202ENST00000336057 PPOXP50336 477 aa13.28□□□□□ -0.28
HDAC5-202ENST00000336057 LCN2P80188 198 aa13.28□□□□□ -0.28
HDAC5-202ENST00000336057 WDR31Q8NA23 367 aa13.28□□□□□ -0.28
HDAC5-202ENST00000336057 OR51G1Q8NGK1 321 aa13.28□□□□□ -0.28
HDAC5-202ENST00000336057 HILPDAQ9Y5L2 63 aa13.28□□□□□ -0.28
HDAC5-202ENST00000336057 NCOR1O75376 2440 aa13.28□□□□□ -0.28
HDAC5-202ENST00000336057 COL5A1-AS1Q5SY13 56 aa13.28□□□□□ -0.28
HDAC5-202ENST00000336057 MRPL32Q9BYC8 188 aaKnown RBP13.28□□□□□ -0.28
HDAC5-202ENST00000336057 WFDC1Q9HC57 220 aa13.28□□□□□ -0.28
HDAC5-202ENST00000336057 ICAM4Q14773 271 aa13.28□□□□□ -0.28
HDAC5-202ENST00000336057 BPIFA4PQ86YQ2 179 aa13.28□□□□□ -0.28
HDAC5-202ENST00000336057 OR8A1Q8NGG7 326 aa13.28□□□□□ -0.28
HDAC5-202ENST00000336057 TRAV24A0A0B4J272 114 aa13.27□□□□□ -0.28
HDAC5-202ENST00000336057 RRHO14718 337 aa13.27□□□□□ -0.28
HDAC5-202ENST00000336057 WDYHV1Q96HA8 205 aa13.27□□□□□ -0.28
HDAC5-202ENST00000336057 GRIFINA4D1Z8 144 aa13.27□□□□□ -0.29
HDAC5-202ENST00000336057 TNFSF10P50591 281 aa13.27□□□□□ -0.29
HDAC5-202ENST00000336057 PLAURQ03405 335 aa13.27□□□□□ -0.29
HDAC5-202ENST00000336057 ECSCRQ19T08 205 aa13.27□□□□□ -0.29
HDAC5-202ENST00000336057 NPIPB3Q92617 1050 aa13.27□□□□□ -0.29
HDAC5-202ENST00000336057 DCTN5Q9BTE1 182 aa13.27□□□□□ -0.29
HDAC5-202ENST00000336057 TRBV9A0A0B4J1U6 114 aa13.27□□□□□ -0.29
HDAC5-202ENST00000336057 SRIP30626 198 aa13.27□□□□□ -0.29
HDAC5-202ENST00000336057 WFIKKN1Q96NZ8 548 aa13.27□□□□□ -0.29
HDAC5-202ENST00000336057 ELOVL1Q9BW60 279 aa13.27□□□□□ -0.29
HDAC5-202ENST00000336057 CD5P06127 495 aa13.27□□□□□ -0.29
HDAC5-202ENST00000336057 COMPP49747 757 aaPredicted RBP13.27□□□□□ -0.29
HDAC5-202ENST00000336057 KIAA1644Q3SXP7 199 aa13.27□□□□□ -0.29
HDAC5-202ENST00000336057 CENPWQ5EE01 88 aa13.27□□□□□ -0.29
HDAC5-202ENST00000336057 GLRX5Q86SX6 157 aa13.27□□□□□ -0.29
HDAC5-202ENST00000336057 PNRC2Q9NPJ4 139 aaKnown RBP13.27□□□□□ -0.29
HDAC5-202ENST00000336057 ESPL1Q14674 2120 aa13.26□□□□□ -0.29
HDAC5-202ENST00000336057 QRFPP83859 136 aa13.26□□□□□ -0.29
HDAC5-202ENST00000336057 HOXA4Q00056 320 aaPredicted RBP13.26□□□□□ -0.29
HDAC5-202ENST00000336057 IGHV2OR16-5A0A0B4J2B6 119 aa13.26□□□□□ -0.29
HDAC5-202ENST00000336057 GPR6P46095 362 aaPredicted RBP13.26□□□□□ -0.29
HDAC5-202ENST00000336057 OR4A5Q8NH83 315 aa13.26□□□□□ -0.29
HDAC5-202ENST00000336057 OR5R1Q8NH85 324 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms