RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 MAP1LC3B2A6NCE7 125 aa14.32□□□□□ -0.12
DDX28-201ENST00000332395 IGKV1D-33P01593 117 aa14.32□□□□□ -0.12
DDX28-201ENST00000332395 IGKV1-33P01594 117 aa14.32□□□□□ -0.12
DDX28-201ENST00000332395 BCL2P10415 239 aa14.32□□□□□ -0.12
DDX28-201ENST00000332395 RELBQ01201 579 aa14.32□□□□□ -0.12
DDX28-201ENST00000332395 RBPJQ06330 500 aa14.32□□□□□ -0.12
DDX28-201ENST00000332395 TFF3Q07654 80 aa14.32□□□□□ -0.12
DDX28-201ENST00000332395 LYG1Q8N1E2 194 aa14.32□□□□□ -0.12
DDX28-201ENST00000332395 RPP25LQ8N5L8 163 aaKnown RBP14.32□□□□□ -0.12
DDX28-201ENST00000332395 OR52E5Q8NH55 327 aa14.32□□□□□ -0.12
DDX28-201ENST00000332395 RND1Q92730 232 aa14.32□□□□□ -0.12
DDX28-201ENST00000332395 MAP1LC3BQ9GZQ8 125 aa14.32□□□□□ -0.12
DDX28-201ENST00000332395 CISD1Q9NZ45 108 aaKnown RBP14.32□□□□□ -0.12
DDX28-201ENST00000332395 PCNX1Q96RV3 2341 aa14.32□□□□□ -0.12
DDX28-201ENST00000332395 TRAV3A0A0B4J244 114 aa14.32□□□□□ -0.12
DDX28-201ENST00000332395 NKX6-3A6NJ46 265 aa14.32□□□□□ -0.12
DDX28-201ENST00000332395 ATXN7O15265 892 aaPredicted RBP14.32□□□□□ -0.12
DDX28-201ENST00000332395 LY86O95711 162 aa14.32□□□□□ -0.12
DDX28-201ENST00000332395 MRPS11P82912 194 aaKnown RBP14.32□□□□□ -0.12
DDX28-201ENST00000332395 TLE1Q04724 770 aa14.32□□□□□ -0.12
DDX28-201ENST00000332395 WFIKKN1Q96NZ8 548 aa14.32□□□□□ -0.12
DDX28-201ENST00000332395 SAP30LQ9HAJ7 183 aa14.32□□□□□ -0.12
DDX28-201ENST00000332395 ZNF727A8MUV8 499 aa14.31□□□□□ -0.12
DDX28-201ENST00000332395 MMP23AO75900 390 aa14.31□□□□□ -0.12
DDX28-201ENST00000332395 FOSL1P15407 271 aa14.31□□□□□ -0.12
DDX28-201ENST00000332395 NDUFB7P17568 137 aa14.31□□□□□ -0.12
DDX28-201ENST00000332395 THBS3P49746 956 aa14.31□□□□□ -0.12
DDX28-201ENST00000332395 GNG10P50151 68 aa14.31□□□□□ -0.12
DDX28-201ENST00000332395 ELOBQ15370 118 aa14.31□□□□□ -0.12
DDX28-201ENST00000332395 ZNF429Q86V71 674 aa14.31□□□□□ -0.12
DDX28-201ENST00000332395 OR10G4Q8NGN3 311 aa14.31□□□□□ -0.12
DDX28-201ENST00000332395 RAB39BQ96DA2 213 aa14.31□□□□□ -0.12
DDX28-201ENST00000332395 NPCDR1Q9BY65 106 aa14.31□□□□□ -0.12
DDX28-201ENST00000332395 PRDM13Q9H4Q3 707 aa14.31□□□□□ -0.12
DDX28-201ENST00000332395 TRAV38-1A0A0B4J264 116 aa14.3□□□□□ -0.12
DDX28-201ENST00000332395 hADV38S2A0JD32 116 aa14.3□□□□□ -0.12
DDX28-201ENST00000332395 SEC14L6B5MCN3 397 aa14.3□□□□□ -0.12
DDX28-201ENST00000332395 ZNF674Q2M3X9 581 aa14.3□□□□□ -0.12
DDX28-201ENST00000332395 TMEM30BQ3MIR4 351 aa14.3□□□□□ -0.12
DDX28-201ENST00000332395 PDLIM3Q53GG5 364 aaPredicted RBP14.3□□□□□ -0.12
DDX28-201ENST00000332395 Q8WTZ3 238 aa14.3□□□□□ -0.12
DDX28-201ENST00000332395 SLC39A9Q9NUM3 307 aa14.3□□□□□ -0.12
DDX28-201ENST00000332395 RPUSD1Q9UJJ7 312 aaKnown RBP14.3□□□□□ -0.12
DDX28-201ENST00000332395 CXCL1P09341 107 aa14.3□□□□□ -0.12
DDX28-201ENST00000332395 MDKP21741 143 aaPredicted RBP14.3□□□□□ -0.12
DDX28-201ENST00000332395 TAGLN2P37802 199 aaKnown RBP14.3□□□□□ -0.12
DDX28-201ENST00000332395 SLC25A10Q9UBX3 287 aaPredicted RBP14.3□□□□□ -0.12
DDX28-201ENST00000332395 MSRB2Q9Y3D2 182 aa14.3□□□□□ -0.12
DDX28-201ENST00000332395 LINC00312Q9Y6C7 94 aa14.3□□□□□ -0.12
DDX28-201ENST00000332395 ADGRG4Q8IZF6 3080 aa14.29□□□□□ -0.12
DDX28-201ENST00000332395 IFNA10P01566 189 aa14.29□□□□□ -0.12
DDX28-201ENST00000332395 MBP02144 154 aa14.29□□□□□ -0.12
DDX28-201ENST00000332395 HIST1H1BP16401 226 aaKnown RBP14.29□□□□□ -0.12
DDX28-201ENST00000332395 VDAC2P45880 294 aaPredicted RBP14.29□□□□□ -0.12
DDX28-201ENST00000332395 RPP30P78346 268 aaKnown RBP14.29□□□□□ -0.12
DDX28-201ENST00000332395 FFAR4Q5NUL3 377 aa14.29□□□□□ -0.12
DDX28-201ENST00000332395 ZNF709Q8N972 641 aa14.29□□□□□ -0.12
DDX28-201ENST00000332395 LHX4Q969G2 390 aa14.29□□□□□ -0.12
DDX28-201ENST00000332395 ADTRPQ96IZ2 230 aa14.29□□□□□ -0.12
DDX28-201ENST00000332395 RHOVQ96L33 236 aa14.29□□□□□ -0.12
DDX28-201ENST00000332395 NIPSNAP3BQ9BS92 247 aa14.29□□□□□ -0.12
DDX28-201ENST00000332395 NGBQ9NPG2 151 aa14.29□□□□□ -0.12
DDX28-201ENST00000332395 HEYLQ9NQ87 328 aaPredicted RBP14.29□□□□□ -0.12
DDX28-201ENST00000332395 PTPRQQ9UMZ3 2332 aa14.29□□□□□ -0.12
DDX28-201ENST00000332395 VSTM5A8MXK1 200 aa14.29□□□□□ -0.12
DDX28-201ENST00000332395 PLA2G5P39877 138 aa14.29□□□□□ -0.12
DDX28-201ENST00000332395 DNLZQ5SXM8 178 aa14.29□□□□□ -0.12
DDX28-201ENST00000332395 ZNF343Q6P1L6 599 aa14.29□□□□□ -0.12
DDX28-201ENST00000332395 SPNS3Q6ZMD2 512 aa14.29□□□□□ -0.12
DDX28-201ENST00000332395 SLC25A48Q6ZT89 311 aaKnown RBP14.29□□□□□ -0.12
DDX28-201ENST00000332395 C1orf87Q8N0U7 546 aa14.29□□□□□ -0.12
DDX28-201ENST00000332395 OR10D4PQ8NGN7 298 aa14.29□□□□□ -0.12
DDX28-201ENST00000332395 C14orf144Q96I85 54 aa14.29□□□□□ -0.12
DDX28-201ENST00000332395 VKORC1Q9BQB6 163 aa14.29□□□□□ -0.12
DDX28-201ENST00000332395 SLC25A22Q9H936 323 aa14.29□□□□□ -0.12
DDX28-201ENST00000332395 C15orf61A6NNL5 157 aa14.28□□□□□ -0.12
DDX28-201ENST00000332395 TMEM178BH3BS89 294 aa14.28□□□□□ -0.12
DDX28-201ENST00000332395 HIST1H2BKO60814 126 aa14.28□□□□□ -0.12
DDX28-201ENST00000332395 HIST1H2BJP06899 126 aa14.28□□□□□ -0.12
DDX28-201ENST00000332395 HIST1H2BOP23527 126 aa14.28□□□□□ -0.12
DDX28-201ENST00000332395 HIST1H2BBP33778 126 aa14.28□□□□□ -0.12
DDX28-201ENST00000332395 HIST1H2BDP58876 126 aa14.28□□□□□ -0.12
DDX28-201ENST00000332395 RAB11AP62491 216 aa14.28□□□□□ -0.12
DDX28-201ENST00000332395 HIST1H2BCP62807 126 aa14.28□□□□□ -0.12
DDX28-201ENST00000332395 HIST2H2BEQ16778 126 aa14.28□□□□□ -0.12
DDX28-201ENST00000332395 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.28□□□□□ -0.12
DDX28-201ENST00000332395 FAM90A2PQ658T7 463 aa14.28□□□□□ -0.12
DDX28-201ENST00000332395 OR4A47Q6IF82 309 aa14.28□□□□□ -0.12
DDX28-201ENST00000332395 OR10G9Q8NGN4 311 aa14.28□□□□□ -0.12
DDX28-201ENST00000332395 OR10G7Q8NGN6 311 aa14.28□□□□□ -0.12
DDX28-201ENST00000332395 HIST1H2BHQ93079 126 aa14.28□□□□□ -0.12
DDX28-201ENST00000332395 TVP23CQ96ET8 276 aa14.28□□□□□ -0.12
DDX28-201ENST00000332395 HIST1H2BNQ99877 126 aa14.28□□□□□ -0.12
DDX28-201ENST00000332395 HIST1H2BMQ99879 126 aa14.28□□□□□ -0.12
DDX28-201ENST00000332395 SIRT7Q9NRC8 400 aa14.28□□□□□ -0.12
DDX28-201ENST00000332395 TCF19Q9Y242 345 aa14.28□□□□□ -0.12
DDX28-201ENST00000332395 TET2Q6N021 2002 aaPredicted RBP14.28□□□□□ -0.12
DDX28-201ENST00000332395 PPIAL4EA0A075B759 164 aa14.27□□□□□ -0.12
DDX28-201ENST00000332395 CTXND1A0A1B0GTU2 59 aa14.27□□□□□ -0.12
DDX28-201ENST00000332395 CXorf65A6NEN9 183 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms