RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 MMD2Q8IY49 270 aa14.11□□□□□ -0.15
PTCH1-201ENST00000331920 WDR34Q96EX3 536 aa14.11□□□□□ -0.15
PTCH1-201ENST00000331920 CHST5Q9GZS9 411 aa14.1□□□□□ -0.15
PTCH1-201ENST00000331920 INS-IGF2F8WCM5 200 aa14.1□□□□□ -0.15
PTCH1-201ENST00000331920 INSP01308 110 aa14.1□□□□□ -0.15
PTCH1-201ENST00000331920 SF3B5Q9BWJ5 86 aaKnown RBP14.1□□□□□ -0.15
PTCH1-201ENST00000331920 TTTY12Q9BZ98 90 aa14.1□□□□□ -0.15
PTCH1-201ENST00000331920 TAF15Q92804 592 aaKnown RBP eCLIP14.1□□□□□ -0.15
PTCH1-201ENST00000331920 IDI2-AS1Q9NZ38 188 aa14.1□□□□□ -0.15
PTCH1-201ENST00000331920 POLR2AP24928 1970 aaKnown RBP14.1□□□□□ -0.15
PTCH1-201ENST00000331920 H0Y980 276 aa14.1□□□□□ -0.15
PTCH1-201ENST00000331920 DEFB104AQ8WTQ1 72 aa14.1□□□□□ -0.15
PTCH1-201ENST00000331920 F5P12259 2224 aa14.1□□□□□ -0.15
PTCH1-201ENST00000331920 IGHV5-10-1A0A0J9YXX1 117 aa14.1□□□□□ -0.15
PTCH1-201ENST00000331920 LINC00158P58513 81 aa14.1□□□□□ -0.15
PTCH1-201ENST00000331920 ST6GALNAC2Q9UJ37 374 aa14.1□□□□□ -0.15
PTCH1-201ENST00000331920 C8orf88P0DMB2 117 aa14.1□□□□□ -0.15
PTCH1-201ENST00000331920 EGR1P18146 543 aa14.1□□□□□ -0.15
PTCH1-201ENST00000331920 IGHV1OR15-9A0A0B4J2B8 117 aa14.1□□□□□ -0.15
PTCH1-201ENST00000331920 MPV17P39210 176 aa14.09□□□□□ -0.15
PTCH1-201ENST00000331920 VCX2Q9H322 139 aa14.09□□□□□ -0.15
PTCH1-201ENST00000331920 C5P01031 1676 aa14.09□□□□□ -0.15
PTCH1-201ENST00000331920 ZG16O60844 167 aa14.09□□□□□ -0.15
PTCH1-201ENST00000331920 PRB3Q04118 309 aaPredicted RBP14.09□□□□□ -0.15
PTCH1-201ENST00000331920 KCNK17Q96T54 332 aa14.09□□□□□ -0.15
PTCH1-201ENST00000331920 FAM19A2Q8N3H0 131 aa14.09□□□□□ -0.15
PTCH1-201ENST00000331920 TMEM92Q6UXU6 159 aa14.09□□□□□ -0.15
PTCH1-201ENST00000331920 LRTM2Q8N967 370 aa14.09□□□□□ -0.15
PTCH1-201ENST00000331920 ARFGEF3Q5TH69 2177 aa14.09□□□□□ -0.15
PTCH1-201ENST00000331920 NDUFS8O00217 210 aa14.09□□□□□ -0.15
PTCH1-201ENST00000331920 PNKDQ8N490 385 aa14.09□□□□□ -0.15
PTCH1-201ENST00000331920 VKORC1Q9BQB6 163 aa14.09□□□□□ -0.15
PTCH1-201ENST00000331920 ABCA1O95477 2261 aa14.09□□□□□ -0.15
PTCH1-201ENST00000331920 CD7P09564 240 aa14.09□□□□□ -0.15
PTCH1-201ENST00000331920 MBD1Q9UIS9 605 aaPredicted RBP14.09□□□□□ -0.15
PTCH1-201ENST00000331920 H3BUT2 72 aa14.08□□□□□ -0.15
PTCH1-201ENST00000331920 ORAOV1Q8WV07 137 aa14.08□□□□□ -0.15
PTCH1-201ENST00000331920 ZNF625Q96I27 306 aaPredicted RBP14.08□□□□□ -0.15
PTCH1-201ENST00000331920 C3orf36Q3SXR2 165 aa14.08□□□□□ -0.16
PTCH1-201ENST00000331920 NRTNQ99748 197 aa14.08□□□□□ -0.16
PTCH1-201ENST00000331920 FGFRL1Q8N441 504 aa14.08□□□□□ -0.16
PTCH1-201ENST00000331920 FOXA2Q9Y261 457 aaPredicted RBP14.08□□□□□ -0.16
PTCH1-201ENST00000331920 LIPFP07098 398 aa14.08□□□□□ -0.16
PTCH1-201ENST00000331920 DCAF10Q5QP82 559 aa14.08□□□□□ -0.16
PTCH1-201ENST00000331920 VSIG8P0DPA2 414 aa14.08□□□□□ -0.16
PTCH1-201ENST00000331920 EVI2AP22794 236 aa14.08□□□□□ -0.16
PTCH1-201ENST00000331920 JPT2Q9H910 190 aa14.08□□□□□ -0.16
PTCH1-201ENST00000331920 Q6ZNB5 142 aa14.08□□□□□ -0.16
PTCH1-201ENST00000331920 GGACTQ9BVM4 153 aa14.08□□□□□ -0.16
PTCH1-201ENST00000331920 ELOVL5Q9NYP7 299 aa14.08□□□□□ -0.16
PTCH1-201ENST00000331920 SELENOKQ9Y6D0 94 aa14.08□□□□□ -0.16
PTCH1-201ENST00000331920 LIFP15018 202 aa14.07□□□□□ -0.16
PTCH1-201ENST00000331920 NHP2Q9NX24 153 aaKnown RBP14.07□□□□□ -0.16
PTCH1-201ENST00000331920 NPIPB11E5RHQ5 1161 aa14.07□□□□□ -0.16
PTCH1-201ENST00000331920 CRYGNQ8WXF5 182 aa14.07□□□□□ -0.16
PTCH1-201ENST00000331920 ZNF385AQ96PM9 386 aaKnown RBP14.07□□□□□ -0.16
PTCH1-201ENST00000331920 IL11P20809 199 aa14.07□□□□□ -0.16
PTCH1-201ENST00000331920 PDLIM4P50479 330 aa14.07□□□□□ -0.16
PTCH1-201ENST00000331920 DMKNQ6E0U4 476 aaPredicted RBP14.07□□□□□ -0.16
PTCH1-201ENST00000331920 WBP1LQ9NX94 342 aa14.07□□□□□ -0.16
PTCH1-201ENST00000331920 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.07□□□□□ -0.16
PTCH1-201ENST00000331920 CEACAM21Q3KPI0 293 aa14.07□□□□□ -0.16
PTCH1-201ENST00000331920 NABP2Q9BQ15 211 aa14.07□□□□□ -0.16
PTCH1-201ENST00000331920 CYSLTR1Q9Y271 337 aa14.07□□□□□ -0.16
PTCH1-201ENST00000331920 DOCK6Q96HP0 2047 aa14.07□□□□□ -0.16
PTCH1-201ENST00000331920 TRGV4A0A0C4DH28 118 aa14.07□□□□□ -0.16
PTCH1-201ENST00000331920 SRD5A1P18405 259 aa14.07□□□□□ -0.16
PTCH1-201ENST00000331920 NPIPB3Q92617 1050 aa14.07□□□□□ -0.16
PTCH1-201ENST00000331920 PRB4P10163 310 aaPredicted RBP14.07□□□□□ -0.16
PTCH1-201ENST00000331920 DOCK2Q92608 1830 aa14.07□□□□□ -0.16
PTCH1-201ENST00000331920 IGLV3-27P01718 113 aa14.07□□□□□ -0.16
PTCH1-201ENST00000331920 NSUN5P1Q3KNT7 163 aa14.07□□□□□ -0.16
PTCH1-201ENST00000331920 GAGE2EQ4V326 116 aa14.07□□□□□ -0.16
PTCH1-201ENST00000331920 PUSL1Q8N0Z8 303 aaKnown RBP14.07□□□□□ -0.16
PTCH1-201ENST00000331920 GAGE2DQ9UEU5 116 aa14.07□□□□□ -0.16
PTCH1-201ENST00000331920 V9GYH0 126 aa14.07□□□□□ -0.16
PTCH1-201ENST00000331920 NAPSAO96009 420 aa14.06□□□□□ -0.16
PTCH1-201ENST00000331920 CLEC19AQ6UXS0 136 aa14.06□□□□□ -0.16
PTCH1-201ENST00000331920 C11orf44Q8N8P7 122 aa14.06□□□□□ -0.16
PTCH1-201ENST00000331920 GPR146Q96CH1 333 aa14.06□□□□□ -0.16
PTCH1-201ENST00000331920 TOGARAM1Q9Y4F4 1720 aa14.06□□□□□ -0.16
PTCH1-201ENST00000331920 ABCA7Q8IZY2 2146 aa14.06□□□□□ -0.16
PTCH1-201ENST00000331920 MARCH11A6NNE9 402 aa14.06□□□□□ -0.16
PTCH1-201ENST00000331920 C21orf140B9A014 251 aa14.06□□□□□ -0.16
PTCH1-201ENST00000331920 FOXL2P58012 376 aa14.06□□□□□ -0.16
PTCH1-201ENST00000331920 PGPEP1LA6NFU8 196 aa14.06□□□□□ -0.16
PTCH1-201ENST00000331920 OGG1O15527 345 aa14.06□□□□□ -0.16
PTCH1-201ENST00000331920 UPK3AO75631 287 aa14.06□□□□□ -0.16
PTCH1-201ENST00000331920 HOXD3P31249 432 aaPredicted RBP14.06□□□□□ -0.16
PTCH1-201ENST00000331920 IMMP2LQ96T52 175 aa14.06□□□□□ -0.16
PTCH1-201ENST00000331920 SPINT1O43278 529 aa14.06□□□□□ -0.16
PTCH1-201ENST00000331920 GPR183P32249 361 aa14.06□□□□□ -0.16
PTCH1-201ENST00000331920 HOGA1Q86XE5 327 aa14.06□□□□□ -0.16
PTCH1-201ENST00000331920 GCSAMQ8N6F7 178 aa14.06□□□□□ -0.16
PTCH1-201ENST00000331920 TRBV5-4A0A0C4DH59 114 aa14.06□□□□□ -0.16
PTCH1-201ENST00000331920 TOMM40O96008 361 aa14.06□□□□□ -0.16
PTCH1-201ENST00000331920 GTSCR1Q86UQ5 136 aa14.06□□□□□ -0.16
PTCH1-201ENST00000331920 SLC17A3O00476 420 aa14.05□□□□□ -0.16
PTCH1-201ENST00000331920 CXCL2P19875 107 aa14.05□□□□□ -0.16
PTCH1-201ENST00000331920 FHL5Q5TD97 284 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms