RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 KBTBD11O94819 623 aa11.97□□□□□ -0.49
TPM3-206ENST00000330188 CDC34P49427 236 aaPredicted RBP11.97□□□□□ -0.49
TPM3-206ENST00000330188 ZNF674Q2M3X9 581 aa11.97□□□□□ -0.49
TPM3-206ENST00000330188 CYP2G1PQ6ZSU1 146 aa11.97□□□□□ -0.49
TPM3-206ENST00000330188 ABHD12Q8N2K0 398 aa11.97□□□□□ -0.49
TPM3-206ENST00000330188 CISD2Q8N5K1 135 aaKnown RBP11.97□□□□□ -0.49
TPM3-206ENST00000330188 Q8NA96 180 aa11.97□□□□□ -0.49
TPM3-206ENST00000330188 SNRNP40Q96DI7 357 aaKnown RBP11.97□□□□□ -0.49
TPM3-206ENST00000330188 RHOVQ96L33 236 aa11.97□□□□□ -0.49
TPM3-206ENST00000330188 NAT8Q9UHE5 227 aa11.97□□□□□ -0.49
TPM3-206ENST00000330188 SMCO3A2RU48 225 aa11.96□□□□□ -0.49
TPM3-206ENST00000330188 CLDN34H7C241 214 aa11.96□□□□□ -0.49
TPM3-206ENST00000330188 MPDU1O75352 247 aa11.96□□□□□ -0.49
TPM3-206ENST00000330188 S100A8P05109 93 aa11.96□□□□□ -0.49
TPM3-206ENST00000330188 GNG10P50151 68 aa11.96□□□□□ -0.49
TPM3-206ENST00000330188 TMPRSS3P57727 454 aa11.96□□□□□ -0.49
TPM3-206ENST00000330188 CCL8P80075 99 aa11.96□□□□□ -0.49
TPM3-206ENST00000330188 ADIPOQQ15848 244 aa11.96□□□□□ -0.49
TPM3-206ENST00000330188 GCSAMLQ5JQS6 135 aa11.96□□□□□ -0.49
TPM3-206ENST00000330188 OR4A47Q6IF82 309 aa11.96□□□□□ -0.49
TPM3-206ENST00000330188 TREML4Q6UXN2 200 aa11.96□□□□□ -0.49
TPM3-206ENST00000330188 ADTRPQ96IZ2 230 aa11.96□□□□□ -0.49
TPM3-206ENST00000330188 FOXA2Q9Y261 457 aaPredicted RBP11.96□□□□□ -0.49
TPM3-206ENST00000330188 THBDP07204 575 aa11.96□□□□□ -0.5
TPM3-206ENST00000330188 KIAA0141Q14154 515 aaPredicted RBP11.96□□□□□ -0.5
TPM3-206ENST00000330188 IQCF2Q8IXL9 164 aa11.96□□□□□ -0.5
TPM3-206ENST00000330188 ZCCHC14Q8WYQ9 949 aaKnown RBP11.96□□□□□ -0.5
TPM3-206ENST00000330188 RPUSD4Q96CM3 377 aaKnown RBP11.96□□□□□ -0.5
TPM3-206ENST00000330188 SSX3Q99909 188 aa11.96□□□□□ -0.5
TPM3-206ENST00000330188 PARLQ9H300 379 aa11.96□□□□□ -0.5
TPM3-206ENST00000330188 MS4A5Q9H3V2 200 aa11.96□□□□□ -0.5
TPM3-206ENST00000330188 TMEM14BQ9NUH8 114 aa11.96□□□□□ -0.5
TPM3-206ENST00000330188 RPUSD1Q9UJJ7 312 aaKnown RBP11.96□□□□□ -0.5
TPM3-206ENST00000330188 C17orf100A8MU93 164 aa11.95□□□□□ -0.5
TPM3-206ENST00000330188 SOX15O60248 233 aa11.95□□□□□ -0.5
TPM3-206ENST00000330188 PAGE4O60829 102 aa11.95□□□□□ -0.5
TPM3-206ENST00000330188 YIF1AO95070 293 aa11.95□□□□□ -0.5
TPM3-206ENST00000330188 OR4A8P0C604 315 aa11.95□□□□□ -0.5
TPM3-206ENST00000330188 TMEM241Q24JQ0 296 aa11.95□□□□□ -0.5
TPM3-206ENST00000330188 TMEM30BQ3MIR4 351 aa11.95□□□□□ -0.5
TPM3-206ENST00000330188 SLC25A48Q6ZT89 311 aaKnown RBP11.95□□□□□ -0.5
TPM3-206ENST00000330188 ZGRF1Q86YA3 2104 aa11.95□□□□□ -0.5
TPM3-206ENST00000330188 OR4F5Q8NH21 305 aa11.95□□□□□ -0.5
TPM3-206ENST00000330188 OR4F4Q96R69 305 aa11.95□□□□□ -0.5
TPM3-206ENST00000330188 MGST2Q99735 147 aa11.95□□□□□ -0.5
TPM3-206ENST00000330188 CTDSP1Q9GZU7 261 aa11.95□□□□□ -0.5
TPM3-206ENST00000330188 JKAMPQ9P055 326 aa11.95□□□□□ -0.5
TPM3-206ENST00000330188 SH3BGRL2Q9UJC5 107 aa11.95□□□□□ -0.5
TPM3-206ENST00000330188 YLPM1P49750 1951 aaKnown RBP11.95□□□□□ -0.5
TPM3-206ENST00000330188 RIF1Q5UIP0 2472 aaKnown RBP11.95□□□□□ -0.5
TPM3-206ENST00000330188 TRAV38-1A0A0B4J264 116 aa11.95□□□□□ -0.5
TPM3-206ENST00000330188 TNFRSF1AP19438 455 aa11.95□□□□□ -0.5
TPM3-206ENST00000330188 OPRK1P41145 380 aa11.95□□□□□ -0.5
TPM3-206ENST00000330188 BSPH1Q075Z2 132 aa11.95□□□□□ -0.5
TPM3-206ENST00000330188 ADIRFQ15847 76 aa11.95□□□□□ -0.5
TPM3-206ENST00000330188 POU2AF1Q16633 256 aa11.95□□□□□ -0.5
TPM3-206ENST00000330188 C1orf87Q8N0U7 546 aa11.95□□□□□ -0.5
TPM3-206ENST00000330188 ZCCHC24Q8N2G6 241 aaKnown RBP11.95□□□□□ -0.5
TPM3-206ENST00000330188 RAB1CQ92928 201 aa11.95□□□□□ -0.5
TPM3-206ENST00000330188 GGTLC1Q9BX51 225 aa11.95□□□□□ -0.5
TPM3-206ENST00000330188 NKX6-3A6NJ46 265 aa11.94□□□□□ -0.5
TPM3-206ENST00000330188 TMPRSS2O15393 492 aa11.94□□□□□ -0.5
TPM3-206ENST00000330188 SMIM6P0DI80 62 aa11.94□□□□□ -0.5
TPM3-206ENST00000330188 HSPE1P61604 102 aaKnown RBP11.94□□□□□ -0.5
TPM3-206ENST00000330188 RPL23P62829 140 aaKnown RBP11.94□□□□□ -0.5
TPM3-206ENST00000330188 TMEM249Q2WGJ8 235 aa11.94□□□□□ -0.5
TPM3-206ENST00000330188 GFRALQ6UXV0 394 aa11.94□□□□□ -0.5
TPM3-206ENST00000330188 C1orf159Q96HA4 380 aa11.94□□□□□ -0.5
TPM3-206ENST00000330188 LINC00312Q9Y6C7 94 aa11.94□□□□□ -0.5
TPM3-206ENST00000330188 hADV38S2A0JD32 116 aa11.93□□□□□ -0.5
TPM3-206ENST00000330188 NDUFB7P17568 137 aa11.93□□□□□ -0.5
TPM3-206ENST00000330188 NEIL1Q96FI4 390 aaPredicted RBP11.93□□□□□ -0.5
TPM3-206ENST00000330188 FAM210BQ96KR6 192 aa11.93□□□□□ -0.5
TPM3-206ENST00000330188 ZNRD1Q9P1U0 126 aa11.93□□□□□ -0.5
TPM3-206ENST00000330188 ZNF835Q9Y2P0 537 aa11.93□□□□□ -0.5
TPM3-206ENST00000330188 ZFHX2Q9C0A1 2572 aaPredicted RBP11.93□□□□□ -0.5
TPM3-206ENST00000330188 HRASP01112 189 aa11.93□□□□□ -0.5
TPM3-206ENST00000330188 OPN1MWP04001 364 aa11.93□□□□□ -0.5
TPM3-206ENST00000330188 IL6RP08887 468 aaPredicted RBP11.93□□□□□ -0.5
TPM3-206ENST00000330188 CT45A6P0DMU7 189 aa11.93□□□□□ -0.5
TPM3-206ENST00000330188 CT45A5P0DMU8 189 aa11.93□□□□□ -0.5
TPM3-206ENST00000330188 CT45A7P0DMV0 189 aa11.93□□□□□ -0.5
TPM3-206ENST00000330188 OPN1MW2P0DN77 364 aa11.93□□□□□ -0.5
TPM3-206ENST00000330188 OPN1MW3P0DN78 364 aa11.93□□□□□ -0.5
TPM3-206ENST00000330188 MYOD1P15172 320 aa11.93□□□□□ -0.5
TPM3-206ENST00000330188 NPY1RP25929 384 aa11.93□□□□□ -0.5
TPM3-206ENST00000330188 BSXQ3C1V8 233 aa11.93□□□□□ -0.5
TPM3-206ENST00000330188 NCMAPQ5T1S8 102 aa11.93□□□□□ -0.5
TPM3-206ENST00000330188 SLC16A13Q7RTY0 426 aa11.93□□□□□ -0.5
TPM3-206ENST00000330188 OR13D1Q8NGV5 346 aa11.93□□□□□ -0.5
TPM3-206ENST00000330188 PATZ1Q9HBE1 687 aaKnown RBP11.93□□□□□ -0.5
TPM3-206ENST00000330188 LSM4Q9Y4Z0 139 aaKnown RBP11.93□□□□□ -0.5
TPM3-206ENST00000330188 PXMP4Q9Y6I8 212 aa11.93□□□□□ -0.5
TPM3-206ENST00000330188 TRBV24-1A0A075B6N3 115 aa11.92□□□□□ -0.5
TPM3-206ENST00000330188 A0A1W2PPV4 95 aa11.92□□□□□ -0.5
TPM3-206ENST00000330188 C11orf94C9JXX5 98 aa11.92□□□□□ -0.5
TPM3-206ENST00000330188 CLN5O75503 358 aa11.92□□□□□ -0.5
TPM3-206ENST00000330188 TRGC2P03986 189 aa11.92□□□□□ -0.5
TPM3-206ENST00000330188 ARSJQ5FYB0 599 aaPredicted RBP11.92□□□□□ -0.5
TPM3-206ENST00000330188 MIC13Q5XKP0 118 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 121.3 ms