RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 COA4Q9NYJ1 87 aa21.35■■□□□ 1.01
ATPAF1-201ENST00000329231 RSL24D1Q9UHA3 163 aaKnown RBP21.35■■□□□ 1.01
ATPAF1-201ENST00000329231 IGHV4OR15-8A0A075B7B6 117 aa21.34■■□□□ 1.01
ATPAF1-201ENST00000329231 A0A087WW49 117 aa21.34■■□□□ 1.01
ATPAF1-201ENST00000329231 WI2-2373I1.2A0A1W2PRP0 233 aa21.34■■□□□ 1.01
ATPAF1-201ENST00000329231 RAMP3O60896 148 aa21.34■■□□□ 1.01
ATPAF1-201ENST00000329231 APELAP0DMC3 54 aa21.34■■□□□ 1.01
ATPAF1-201ENST00000329231 SPAG16Q8N0X2 631 aa21.34■■□□□ 1.01
ATPAF1-201ENST00000329231 DCUN1D4Q92564 292 aa21.34■■□□□ 1.01
ATPAF1-201ENST00000329231 TINAGL1Q9GZM7 467 aaPredicted RBP21.34■■□□□ 1.01
ATPAF1-201ENST00000329231 C6orf62Q9GZU0 229 aaPredicted RBP21.34■■□□□ 1.01
ATPAF1-201ENST00000329231 DNAH3Q8TD57 4116 aa21.34■■□□□ 1.01
ATPAF1-201ENST00000329231 ZNF701M0R085 212 aaPredicted RBP21.33■■□□□ 1.01
ATPAF1-201ENST00000329231 OVOL1O14753 267 aa21.33■■□□□ 1.01
ATPAF1-201ENST00000329231 RBFOX2O43251 390 aaKnown RBP eCLIP21.33■■□□□ 1.01
ATPAF1-201ENST00000329231 KBTBD11O94819 623 aa21.33■■□□□ 1.01
ATPAF1-201ENST00000329231 HLA-DMAP28067 261 aa21.33■■□□□ 1.01
ATPAF1-201ENST00000329231 INSL3P51460 131 aa21.33■■□□□ 1.01
ATPAF1-201ENST00000329231 PUSL1Q8N0Z8 303 aaKnown RBP21.33■■□□□ 1.01
ATPAF1-201ENST00000329231 MOB3AQ96BX8 217 aa21.33■■□□□ 1.01
ATPAF1-201ENST00000329231 ABHD1Q96SE0 405 aa21.33■■□□□ 1.01
ATPAF1-201ENST00000329231 TNCP24821 2201 aa21.33■■□□□ 1
ATPAF1-201ENST00000329231 OR9G9P0C7N8 305 aa21.32■■□□□ 1
ATPAF1-201ENST00000329231 GNRHRP30968 328 aa21.32■■□□□ 1
ATPAF1-201ENST00000329231 HRH1P35367 487 aa21.32■■□□□ 1
ATPAF1-201ENST00000329231 SLURP1P55000 103 aa21.32■■□□□ 1
ATPAF1-201ENST00000329231 OR6F1Q8NGZ6 308 aa21.32■■□□□ 1
ATPAF1-201ENST00000329231 MCFD2Q8NI22 146 aa21.32■■□□□ 1
ATPAF1-201ENST00000329231 TMEM167AQ8TBQ9 72 aa21.32■■□□□ 1
ATPAF1-201ENST00000329231 DLX4Q92988 240 aaPredicted RBP21.32■■□□□ 1
ATPAF1-201ENST00000329231 NXF2Q9GZY0 626 aaKnown RBP21.32■■□□□ 1
ATPAF1-201ENST00000329231 MAS1LP35410 378 aa21.31■■□□□ 1
ATPAF1-201ENST00000329231 DEFB121Q5J5C9 76 aa21.31■■□□□ 1
ATPAF1-201ENST00000329231 AADACL3Q5VUY0 350 aa21.31■■□□□ 1
ATPAF1-201ENST00000329231 ADAD2Q8NCV1 583 aaKnown RBP21.31■■□□□ 1
ATPAF1-201ENST00000329231 OR52I2Q8NH67 350 aa21.31■■□□□ 1
ATPAF1-201ENST00000329231 CD300LFQ8TDQ1 290 aa21.31■■□□□ 1
ATPAF1-201ENST00000329231 DIRAS2Q96HU8 199 aa21.31■■□□□ 1
ATPAF1-201ENST00000329231 USMG5Q96IX5 58 aa21.31■■□□□ 1
ATPAF1-201ENST00000329231 RANGRFQ9HD47 186 aaPredicted RBP21.31■■□□□ 1
ATPAF1-201ENST00000329231 RABL2AQ9UBK7 228 aaPredicted RBP21.31■■□□□ 1
ATPAF1-201ENST00000329231 RABL2BQ9UNT1 228 aa21.31■■□□□ 1
ATPAF1-201ENST00000329231 RNASE12Q5GAN4 147 aaKnown RBP21.3■■□□□ 1
ATPAF1-201ENST00000329231 C10orf55Q5SWW7 151 aa21.3■■□□□ 1
ATPAF1-201ENST00000329231 SSX9Q7RTT3 188 aa21.3■■□□□ 1
ATPAF1-201ENST00000329231 OR51H1Q8NH63 302 aa21.3■■□□□ 1
ATPAF1-201ENST00000329231 HPRT1P00492 218 aa21.29■■□□□ 1
ATPAF1-201ENST00000329231 TAS2R31P59538 309 aa21.29■■□□□ 1
ATPAF1-201ENST00000329231 MRPS10P82664 201 aaKnown RBP21.29■■□□□ 1
ATPAF1-201ENST00000329231 ZNF429Q86V71 674 aa21.29■■□□□ 1
ATPAF1-201ENST00000329231 OR4A5Q8NH83 315 aa21.29■■□□□ 1
ATPAF1-201ENST00000329231 FCAMRQ8WWV6 532 aa21.29■■□□□ 1
ATPAF1-201ENST00000329231 KLK11Q9UBX7 282 aa21.29■■□□□ 1
ATPAF1-201ENST00000329231 MTFP1Q9UDX5 166 aa21.29■■□□□ 1
ATPAF1-201ENST00000329231 RPL27AP46776 148 aaKnown RBP21.28■■□□□ 1
ATPAF1-201ENST00000329231 TSPAN5P62079 268 aa21.28■■□□□ 1
ATPAF1-201ENST00000329231 DCTN2Q13561 401 aaKnown RBP21.28■■□□□ 1
ATPAF1-201ENST00000329231 SLC25A42Q86VD7 318 aa21.28■■□□□ 1
ATPAF1-201ENST00000329231 CMTM1Q8IZ96 169 aa21.28■■□□□ 1
ATPAF1-201ENST00000329231 TTC9CQ8N5M4 171 aa21.28■■□□□ 1
ATPAF1-201ENST00000329231 BET1LQ9NYM9 111 aa21.28■■□□□ 1
ATPAF1-201ENST00000329231 GABARAPH6UMI1 98 aa21.27■■□□□ 1
ATPAF1-201ENST00000329231 NQO2P16083 231 aa21.27■■□□□ 1
ATPAF1-201ENST00000329231 ZP3P21754 424 aa21.27■■□□□ 1
ATPAF1-201ENST00000329231 ECI1P42126 302 aa21.27■■□□□ 1
ATPAF1-201ENST00000329231 RPL8P62917 257 aaKnown RBP21.27■■□□□ 1
ATPAF1-201ENST00000329231 PLEKHA2Q9HB19 425 aa21.27■■□□□ 1
ATPAF1-201ENST00000329231 HRASLSQ9HDD0 168 aa21.27■■□□□ 1
ATPAF1-201ENST00000329231 PGLYRP1O75594 196 aaPredicted RBP21.26■□□□□ 0.99
ATPAF1-201ENST00000329231 IL18Q14116 193 aa21.26■□□□□ 0.99
ATPAF1-201ENST00000329231 VAX1Q5SQQ9 334 aa21.26■□□□□ 0.99
ATPAF1-201ENST00000329231 OR4A47Q6IF82 309 aa21.26■□□□□ 0.99
ATPAF1-201ENST00000329231 FXYD6Q9H0Q3 95 aa21.26■□□□□ 0.99
ATPAF1-201ENST00000329231 ANKRD34BA5PLL1 514 aa21.25■□□□□ 0.99
ATPAF1-201ENST00000329231 FAM223BA6NKX1 122 aa21.25■□□□□ 0.99
ATPAF1-201ENST00000329231 GPR31O00270 319 aa21.25■□□□□ 0.99
ATPAF1-201ENST00000329231 SAP30O75446 220 aa21.25■□□□□ 0.99
ATPAF1-201ENST00000329231 RLN1P04808 185 aa21.25■□□□□ 0.99
ATPAF1-201ENST00000329231 TNFSF8P32971 234 aa21.25■□□□□ 0.99
ATPAF1-201ENST00000329231 SSBP1Q04837 148 aaKnown RBP21.25■□□□□ 0.99
ATPAF1-201ENST00000329231 POU2AF1Q16633 256 aa21.25■□□□□ 0.99
ATPAF1-201ENST00000329231 LPCAT3Q6P1A2 487 aa21.25■□□□□ 0.99
ATPAF1-201ENST00000329231 ZNF343Q6P1L6 599 aa21.25■□□□□ 0.99
ATPAF1-201ENST00000329231 FAM223AQ8IWN6 122 aa21.25■□□□□ 0.99
ATPAF1-201ENST00000329231 FYTTD1Q96QD9 318 aaKnown RBP21.25■□□□□ 0.99
ATPAF1-201ENST00000329231 COMMD9Q9P000 198 aa21.25■□□□□ 0.99
ATPAF1-201ENST00000329231 ZNF257Q9Y2Q1 563 aa21.25■□□□□ 0.99
ATPAF1-201ENST00000329231 DPPA5A6NC42 116 aa21.24■□□□□ 0.99
ATPAF1-201ENST00000329231 HMX3A6NHT5 357 aa21.24■□□□□ 0.99
ATPAF1-201ENST00000329231 TEX22C9J3V5 150 aa21.24■□□□□ 0.99
ATPAF1-201ENST00000329231 CTDSPLO15194 276 aa21.24■□□□□ 0.99
ATPAF1-201ENST00000329231 IL6RP08887 468 aaPredicted RBP21.24■□□□□ 0.99
ATPAF1-201ENST00000329231 ZNF735P0CB33 412 aa21.24■□□□□ 0.99
ATPAF1-201ENST00000329231 HLA-GP17693 338 aa21.24■□□□□ 0.99
ATPAF1-201ENST00000329231 TBPP20226 339 aa21.24■□□□□ 0.99
ATPAF1-201ENST00000329231 RHOGP84095 191 aa21.24■□□□□ 0.99
ATPAF1-201ENST00000329231 DEFA5Q01523 94 aa21.24■□□□□ 0.99
ATPAF1-201ENST00000329231 ACSM6Q6P461 480 aa21.24■□□□□ 0.99
ATPAF1-201ENST00000329231 SMIM4Q8WVI0 70 aa21.24■□□□□ 0.99
ATPAF1-201ENST00000329231 SLC2A9Q9NRM0 540 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms