RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 GUSBP1Q15486 140 aa11.63□□□□□ -0.55
ATP2C1-201ENST00000328560 OR2T10Q8NGZ9 312 aa11.63□□□□□ -0.55
ATP2C1-201ENST00000328560 WFIKKN1Q96NZ8 548 aa11.63□□□□□ -0.55
ATP2C1-201ENST00000328560 PLSCR4Q9NRQ2 329 aa11.63□□□□□ -0.55
ATP2C1-201ENST00000328560 WDR83OSQ9Y284 106 aa11.63□□□□□ -0.55
ATP2C1-201ENST00000328560 HCFC1P51610 2035 aa11.63□□□□□ -0.55
ATP2C1-201ENST00000328560 MGST3O14880 152 aa11.63□□□□□ -0.55
ATP2C1-201ENST00000328560 TGOLN2O43493 480 aa11.63□□□□□ -0.55
ATP2C1-201ENST00000328560 HTD2P86397 168 aa11.63□□□□□ -0.55
ATP2C1-201ENST00000328560 PRSS8Q16651 343 aa11.63□□□□□ -0.55
ATP2C1-201ENST00000328560 MGAQ8IWI9 3026 aa11.63□□□□□ -0.55
ATP2C1-201ENST00000328560 KLK10O43240 276 aa11.63□□□□□ -0.55
ATP2C1-201ENST00000328560 HRASP01112 189 aa11.63□□□□□ -0.55
ATP2C1-201ENST00000328560 ARL14EPLP0DKL9 152 aa11.63□□□□□ -0.55
ATP2C1-201ENST00000328560 SPCS3P61009 180 aa11.63□□□□□ -0.55
ATP2C1-201ENST00000328560 LYG1Q8N1E2 194 aa11.63□□□□□ -0.55
ATP2C1-201ENST00000328560 TCTEX1D1Q8N7M0 179 aa11.63□□□□□ -0.55
ATP2C1-201ENST00000328560 MEGF10Q96KG7 1140 aa11.63□□□□□ -0.55
ATP2C1-201ENST00000328560 PKDREJQ9NTG1 2253 aa11.63□□□□□ -0.55
ATP2C1-201ENST00000328560 SRRM5B3KS81 715 aa11.62□□□□□ -0.55
ATP2C1-201ENST00000328560 PHOX2AO14813 284 aa11.62□□□□□ -0.55
ATP2C1-201ENST00000328560 GNB1P62873 340 aa11.62□□□□□ -0.55
ATP2C1-201ENST00000328560 CALYQ9NYX4 217 aa11.62□□□□□ -0.55
ATP2C1-201ENST00000328560 DKK4Q9UBT3 224 aa11.62□□□□□ -0.55
ATP2C1-201ENST00000328560 PXMP4Q9Y6I8 212 aa11.62□□□□□ -0.55
ATP2C1-201ENST00000328560 TNCP24821 2201 aa11.62□□□□□ -0.55
ATP2C1-201ENST00000328560 ZNF705GA8MUZ8 300 aaPredicted RBP11.62□□□□□ -0.55
ATP2C1-201ENST00000328560 C1QTNF9P0C862 333 aa11.62□□□□□ -0.55
ATP2C1-201ENST00000328560 RPP30P78346 268 aaKnown RBP11.62□□□□□ -0.55
ATP2C1-201ENST00000328560 TREML4Q6UXN2 200 aa11.62□□□□□ -0.55
ATP2C1-201ENST00000328560 TCF19Q9Y242 345 aa11.62□□□□□ -0.55
ATP2C1-201ENST00000328560 IGLV1-44P01699 117 aa11.62□□□□□ -0.55
ATP2C1-201ENST00000328560 MBNL2Q5VZF2 373 aaKnown RBP11.62□□□□□ -0.55
ATP2C1-201ENST00000328560 JPT1Q9UK76 154 aa11.62□□□□□ -0.55
ATP2C1-201ENST00000328560 ZNF320A2RRD8 509 aa11.61□□□□□ -0.55
ATP2C1-201ENST00000328560 NDUFS6O75380 124 aaKnown RBP11.61□□□□□ -0.55
ATP2C1-201ENST00000328560 HIST1H1BP16401 226 aaKnown RBP11.61□□□□□ -0.55
ATP2C1-201ENST00000328560 KLF3P57682 345 aaPredicted RBP11.61□□□□□ -0.55
ATP2C1-201ENST00000328560 TRAT1Q6PIZ9 186 aa11.61□□□□□ -0.55
ATP2C1-201ENST00000328560 C1orf229Q6ZS94 237 aaPredicted RBP11.61□□□□□ -0.55
ATP2C1-201ENST00000328560 SLC25A15Q9Y619 301 aa11.61□□□□□ -0.55
ATP2C1-201ENST00000328560 TPRP12270 2363 aaKnown RBP11.61□□□□□ -0.55
ATP2C1-201ENST00000328560 ACTL6BO94805 426 aa11.61□□□□□ -0.55
ATP2C1-201ENST00000328560 IGFL2Q6UWQ7 119 aa11.61□□□□□ -0.55
ATP2C1-201ENST00000328560 C1orf174Q8IYL3 243 aa11.61□□□□□ -0.55
ATP2C1-201ENST00000328560 ZNF114Q8NC26 417 aa11.61□□□□□ -0.55
ATP2C1-201ENST00000328560 OR1P1Q8NH06 330 aa11.61□□□□□ -0.55
ATP2C1-201ENST00000328560 MGST2Q99735 147 aa11.61□□□□□ -0.55
ATP2C1-201ENST00000328560 IFI27L2Q9H2X8 130 aa11.61□□□□□ -0.55
ATP2C1-201ENST00000328560 ENY2Q9NPA8 101 aa11.61□□□□□ -0.55
ATP2C1-201ENST00000328560 YLPM1P49750 1951 aaKnown RBP11.61□□□□□ -0.55
ATP2C1-201ENST00000328560 ZNF729A6NN14 1252 aaPredicted RBP11.61□□□□□ -0.55
ATP2C1-201ENST00000328560 FAM122AQ96E09 287 aa11.61□□□□□ -0.55
ATP2C1-201ENST00000328560 PRDM13Q9H4Q3 707 aa11.61□□□□□ -0.55
ATP2C1-201ENST00000328560 VWC2Q2TAL6 325 aa11.6□□□□□ -0.55
ATP2C1-201ENST00000328560 SEM1Q6ZVN7 128 aa11.6□□□□□ -0.55
ATP2C1-201ENST00000328560 ANAPC16Q96DE5 110 aa11.6□□□□□ -0.55
ATP2C1-201ENST00000328560 ZNRD1Q9P1U0 126 aa11.6□□□□□ -0.55
ATP2C1-201ENST00000328560 GFRA3O60609 400 aa11.6□□□□□ -0.55
ATP2C1-201ENST00000328560 THBS3P49746 956 aa11.6□□□□□ -0.55
ATP2C1-201ENST00000328560 LOXL3P58215 753 aa11.6□□□□□ -0.55
ATP2C1-201ENST00000328560 RELBQ01201 579 aa11.6□□□□□ -0.55
ATP2C1-201ENST00000328560 KCNIP4Q6PIL6 250 aa11.6□□□□□ -0.55
ATP2C1-201ENST00000328560 TMEM183AQ8IXX5 376 aa11.6□□□□□ -0.55
ATP2C1-201ENST00000328560 Q8N7P7 452 aa11.6□□□□□ -0.55
ATP2C1-201ENST00000328560 ZFHX2Q9C0A1 2572 aaPredicted RBP11.6□□□□□ -0.55
ATP2C1-201ENST00000328560 ARFGEF3Q5TH69 2177 aa11.6□□□□□ -0.55
ATP2C1-201ENST00000328560 YPEL1O60688 119 aa11.59□□□□□ -0.55
ATP2C1-201ENST00000328560 CRYABP02511 175 aaKnown RBP11.59□□□□□ -0.55
ATP2C1-201ENST00000328560 AMBPP02760 352 aa11.59□□□□□ -0.55
ATP2C1-201ENST00000328560 PMS2P11Q13670 270 aa11.59□□□□□ -0.55
ATP2C1-201ENST00000328560 CT45A1Q5HYN5 189 aa11.59□□□□□ -0.55
ATP2C1-201ENST00000328560 SPATA31B1PQ5VZV4 182 aa11.59□□□□□ -0.55
ATP2C1-201ENST00000328560 LINC01551Q86U37 167 aa11.59□□□□□ -0.55
ATP2C1-201ENST00000328560 CT45A3Q8NHU0 189 aa11.59□□□□□ -0.55
ATP2C1-201ENST00000328560 YPEL2Q96QA6 119 aa11.59□□□□□ -0.55
ATP2C1-201ENST00000328560 CCL13Q99616 98 aa11.59□□□□□ -0.55
ATP2C1-201ENST00000328560 GGTLC1Q9BX51 225 aa11.59□□□□□ -0.55
ATP2C1-201ENST00000328560 SCO2A0A1W2PP80 73 aa11.59□□□□□ -0.55
ATP2C1-201ENST00000328560 MRPS11P82912 194 aaKnown RBP11.59□□□□□ -0.55
ATP2C1-201ENST00000328560 ZNF474Q6S9Z5 364 aaPredicted RBP11.59□□□□□ -0.55
ATP2C1-201ENST00000328560 SNRNP40Q96DI7 357 aaKnown RBP11.59□□□□□ -0.55
ATP2C1-201ENST00000328560 SAA2-SAA4A0A096LPE2 208 aa11.59□□□□□ -0.55
ATP2C1-201ENST00000328560 SAA2P0DJI9 122 aaPredicted RBP11.59□□□□□ -0.55
ATP2C1-201ENST00000328560 OR4S2Q8NH73 311 aa11.59□□□□□ -0.55
ATP2C1-201ENST00000328560 LAMA5O15230 3695 aa11.58□□□□□ -0.56
ATP2C1-201ENST00000328560 ACACAQ13085 2346 aa11.58□□□□□ -0.56
ATP2C1-201ENST00000328560 F6UZH7 168 aa11.58□□□□□ -0.56
ATP2C1-201ENST00000328560 VDAC2P45880 294 aaPredicted RBP11.58□□□□□ -0.56
ATP2C1-201ENST00000328560 TGIF2LYQ8IUE0 185 aa11.58□□□□□ -0.56
ATP2C1-201ENST00000328560 SGMS2Q8NHU3 365 aa11.58□□□□□ -0.56
ATP2C1-201ENST00000328560 TMEM170AQ8WVE7 144 aa11.58□□□□□ -0.56
ATP2C1-201ENST00000328560 SH3BGRL2Q9UJC5 107 aa11.58□□□□□ -0.56
ATP2C1-201ENST00000328560 TP53TG5Q9Y2B4 290 aa11.58□□□□□ -0.56
ATP2C1-201ENST00000328560 MDFIC2A0A1B0GVS7 189 aa11.58□□□□□ -0.56
ATP2C1-201ENST00000328560 PDE6DO43924 150 aa11.58□□□□□ -0.56
ATP2C1-201ENST00000328560 CGAP01215 116 aa11.58□□□□□ -0.56
ATP2C1-201ENST00000328560 NPY1RP25929 384 aa11.58□□□□□ -0.56
ATP2C1-201ENST00000328560 NUBP1P53384 320 aa11.58□□□□□ -0.56
ATP2C1-201ENST00000328560 OR4A47Q6IF82 309 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms