RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 RPL23P62829 140 aaKnown RBP6.07□□□□□ -1.44
SMC1A-201ENST00000322213 PDCD1Q15116 288 aa6.07□□□□□ -1.44
SMC1A-201ENST00000322213 ZNF257Q9Y2Q1 563 aa6.07□□□□□ -1.44
SMC1A-201ENST00000322213 TMEM14DPA8MWL7 114 aa6.07□□□□□ -1.44
SMC1A-201ENST00000322213 TIMM23BQ5SRD1 257 aa6.07□□□□□ -1.44
SMC1A-201ENST00000322213 ZNF818PQ6ZRF7 136 aa6.07□□□□□ -1.44
SMC1A-201ENST00000322213 PGLYRP4Q96LB8 373 aa6.07□□□□□ -1.44
SMC1A-201ENST00000322213 TM2D1Q9BX74 207 aa6.07□□□□□ -1.44
SMC1A-201ENST00000322213 MAP1LC3AQ9H492 121 aa6.07□□□□□ -1.44
SMC1A-201ENST00000322213 RBP4P02753 201 aa6.07□□□□□ -1.44
SMC1A-201ENST00000322213 FAM19A2Q8N3H0 131 aa6.07□□□□□ -1.44
SMC1A-201ENST00000322213 TMEM186Q96B77 213 aa6.07□□□□□ -1.44
SMC1A-201ENST00000322213 GRAMD2BQ96HH9 432 aa6.07□□□□□ -1.44
SMC1A-201ENST00000322213 DXOO77932 396 aaKnown RBP6.06□□□□□ -1.44
SMC1A-201ENST00000322213 COX6CP09669 75 aa6.06□□□□□ -1.44
SMC1A-201ENST00000322213 ZNF841Q6ZN19 808 aa6.06□□□□□ -1.44
SMC1A-201ENST00000322213 PRNTQ86SH4 94 aa6.06□□□□□ -1.44
SMC1A-201ENST00000322213 C12orf76Q8N812 135 aaPredicted RBP6.06□□□□□ -1.44
SMC1A-201ENST00000322213 FOXB1Q99853 325 aa6.06□□□□□ -1.44
SMC1A-201ENST00000322213 MRPL32Q9BYC8 188 aaKnown RBP6.06□□□□□ -1.44
SMC1A-201ENST00000322213 ANKRD17O75179 2603 aaKnown RBP6.06□□□□□ -1.44
SMC1A-201ENST00000322213 C1QTNF9BB2RNN3 333 aa6.06□□□□□ -1.44
SMC1A-201ENST00000322213 LMX1BO60663 402 aa6.06□□□□□ -1.44
SMC1A-201ENST00000322213 AREGP15514 252 aa6.06□□□□□ -1.44
SMC1A-201ENST00000322213 RAC3P60763 192 aa6.06□□□□□ -1.44
SMC1A-201ENST00000322213 FXYD3Q14802 87 aa6.06□□□□□ -1.44
SMC1A-201ENST00000322213 A0A1W2PPC4 97 aa6.06□□□□□ -1.44
SMC1A-201ENST00000322213 IZUMO1RA6ND01 250 aa6.06□□□□□ -1.44
SMC1A-201ENST00000322213 RAB9AP51151 201 aa6.06□□□□□ -1.44
SMC1A-201ENST00000322213 C1orf174Q8IYL3 243 aa6.06□□□□□ -1.44
SMC1A-201ENST00000322213 RASL11BQ9BPW5 248 aa6.06□□□□□ -1.44
SMC1A-201ENST00000322213 WDR54Q9H977 334 aa6.06□□□□□ -1.44
SMC1A-201ENST00000322213 SYNGR1O43759 233 aa6.06□□□□□ -1.44
SMC1A-201ENST00000322213 FGF12P61328 243 aa6.06□□□□□ -1.44
SMC1A-201ENST00000322213 ZP4Q12836 540 aa6.06□□□□□ -1.44
SMC1A-201ENST00000322213 ASPHD2Q6ICH7 369 aa6.06□□□□□ -1.44
SMC1A-201ENST00000322213 TEX38Q6PEX7 206 aa6.06□□□□□ -1.44
SMC1A-201ENST00000322213 AGBL5Q8NDL9 886 aa6.06□□□□□ -1.44
SMC1A-201ENST00000322213 GOSR1O95249 250 aa6.06□□□□□ -1.44
SMC1A-201ENST00000322213 ZXDCQ2QGD7 858 aaPredicted RBP6.06□□□□□ -1.44
SMC1A-201ENST00000322213 SAMD5Q5TGI4 173 aa6.06□□□□□ -1.44
SMC1A-201ENST00000322213 AMMECR1LQ6DCA0 310 aa6.06□□□□□ -1.44
SMC1A-201ENST00000322213 FAM71F2Q6NXP2 309 aa6.06□□□□□ -1.44
SMC1A-201ENST00000322213 TCF24Q7RTU0 167 aa6.06□□□□□ -1.44
SMC1A-201ENST00000322213 CCL4L1Q8NHW4 92 aa6.06□□□□□ -1.44
SMC1A-201ENST00000322213 AMMECR1Q9Y4X0 333 aaPredicted RBP6.06□□□□□ -1.44
SMC1A-201ENST00000322213 K7ESF4 209 aa6.06□□□□□ -1.44
SMC1A-201ENST00000322213 GAS1P54826 345 aa6.06□□□□□ -1.44
SMC1A-201ENST00000322213 SOX8P57073 446 aa6.06□□□□□ -1.44
SMC1A-201ENST00000322213 LYZP61626 148 aa6.06□□□□□ -1.44
SMC1A-201ENST00000322213 SAXO1Q8IYX7 474 aa6.06□□□□□ -1.44
SMC1A-201ENST00000322213 OR13H1Q8NG92 308 aa6.06□□□□□ -1.44
SMC1A-201ENST00000322213 PATE1Q8WXA2 126 aa6.06□□□□□ -1.44
SMC1A-201ENST00000322213 DMRTA2Q96SC8 542 aa6.06□□□□□ -1.44
SMC1A-201ENST00000322213 A0A0G2JLM5 398 aa6.06□□□□□ -1.44
SMC1A-201ENST00000322213 HIGD1CA8MV81 97 aa6.06□□□□□ -1.44
SMC1A-201ENST00000322213 C17orf51A8MQB3 221 aa6.05□□□□□ -1.44
SMC1A-201ENST00000322213 IGKV1D-16P01601 117 aa6.05□□□□□ -1.44
SMC1A-201ENST00000322213 LRRC75BQ2VPJ9 315 aa6.05□□□□□ -1.44
SMC1A-201ENST00000322213 LINC01590Q5TEZ4 76 aa6.05□□□□□ -1.44
SMC1A-201ENST00000322213 FBXW9Q5XUX1 488 aa6.05□□□□□ -1.44
SMC1A-201ENST00000322213 A0A1B0GWB2 263 aa6.05□□□□□ -1.44
SMC1A-201ENST00000322213 IGFBP3P17936 291 aaPredicted RBP6.05□□□□□ -1.44
SMC1A-201ENST00000322213 KIR2DL1P43626 348 aaPredicted RBP6.05□□□□□ -1.44
SMC1A-201ENST00000322213 KIR2DL2P43627 348 aaPredicted RBP6.05□□□□□ -1.44
SMC1A-201ENST00000322213 LYG1Q8N1E2 194 aa6.05□□□□□ -1.44
SMC1A-201ENST00000322213 OR2H1Q9GZK4 316 aa6.05□□□□□ -1.44
SMC1A-201ENST00000322213 MS4A18H0YCH9 400 aa6.05□□□□□ -1.44
SMC1A-201ENST00000322213 PGLYRP1O75594 196 aaPredicted RBP6.05□□□□□ -1.44
SMC1A-201ENST00000322213 EMP1P54849 157 aa6.05□□□□□ -1.44
SMC1A-201ENST00000322213 RELBQ01201 579 aa6.05□□□□□ -1.44
SMC1A-201ENST00000322213 MS4A18Q3C1V0 323 aa6.05□□□□□ -1.44
SMC1A-201ENST00000322213 TCF23Q7RTU1 214 aa6.05□□□□□ -1.44
SMC1A-201ENST00000322213 TMEM144Q7Z5S9 345 aa6.05□□□□□ -1.44
SMC1A-201ENST00000322213 C8orf44Q96CB5 159 aa6.05□□□□□ -1.44
SMC1A-201ENST00000322213 KIR2DL5BA0A0G2JN68 375 aa6.05□□□□□ -1.44
SMC1A-201ENST00000322213 KIR2DL5BA0A0G2JPC4 375 aa6.05□□□□□ -1.44
SMC1A-201ENST00000322213 CEACAM8P31997 349 aaPredicted RBP6.05□□□□□ -1.44
SMC1A-201ENST00000322213 KIAA1644Q3SXP7 199 aa6.05□□□□□ -1.44
SMC1A-201ENST00000322213 KIR2DL5AQ8N109 375 aa6.05□□□□□ -1.44
SMC1A-201ENST00000322213 FMC1Q96HJ9 113 aa6.05□□□□□ -1.44
SMC1A-201ENST00000322213 GNRHR2Q96P88 292 aa6.05□□□□□ -1.44
SMC1A-201ENST00000322213 MS4A6AQ9H2W1 248 aa6.05□□□□□ -1.44
SMC1A-201ENST00000322213 TMEM56-RWDD3S4R434 201 aa6.05□□□□□ -1.44
SMC1A-201ENST00000322213 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.05□□□□□ -1.44
SMC1A-201ENST00000322213 ZNF205O95201 554 aa6.05□□□□□ -1.44
SMC1A-201ENST00000322213 LRRC10Q5BKY1 277 aa6.05□□□□□ -1.44
SMC1A-201ENST00000322213 SPRED2Q7Z698 418 aa6.05□□□□□ -1.44
SMC1A-201ENST00000322213 DNASE2BQ8WZ79 361 aa6.05□□□□□ -1.44
SMC1A-201ENST00000322213 GEMIN7Q9H840 131 aaKnown RBP6.05□□□□□ -1.44
SMC1A-201ENST00000322213 LHFPL6Q9Y693 200 aa6.05□□□□□ -1.44
SMC1A-201ENST00000322213 H3BUT2 72 aa6.05□□□□□ -1.44
SMC1A-201ENST00000322213 PPBPP02775 128 aa6.05□□□□□ -1.44
SMC1A-201ENST00000322213 TIMP3P35625 211 aa6.05□□□□□ -1.44
SMC1A-201ENST00000322213 PRSS53Q2L4Q9 553 aa6.05□□□□□ -1.44
SMC1A-201ENST00000322213 ST6GALNAC3Q8NDV1 305 aa6.05□□□□□ -1.44
SMC1A-201ENST00000322213 SF3B5Q9BWJ5 86 aaKnown RBP6.05□□□□□ -1.44
SMC1A-201ENST00000322213 A0A0G2JMM0 328 aa6.05□□□□□ -1.44
SMC1A-201ENST00000322213 A0A1W2PPB8 328 aa6.05□□□□□ -1.44
SMC1A-201ENST00000322213 KIR3DP1A8MWS1 328 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms