RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 UCP1P25874 307 aa13.93□□□□□ -0.18
CLIP4-201ENST00000320081 PAX6P26367 422 aa13.93□□□□□ -0.18
CLIP4-201ENST00000320081 GABRA6Q16445 453 aa13.93□□□□□ -0.18
CLIP4-201ENST00000320081 C10orf113Q5VZT2 155 aa13.93□□□□□ -0.18
CLIP4-201ENST00000320081 ATOH7Q8N100 152 aa13.93□□□□□ -0.18
CLIP4-201ENST00000320081 CHD8Q9HCK8 2581 aa13.92□□□□□ -0.18
CLIP4-201ENST00000320081 TRAV24A0A0B4J272 114 aa13.92□□□□□ -0.18
CLIP4-201ENST00000320081 MOSP00540 346 aa13.92□□□□□ -0.18
CLIP4-201ENST00000320081 FAM166AQ6J272 317 aa13.92□□□□□ -0.18
CLIP4-201ENST00000320081 MS4A5Q9H3V2 200 aa13.92□□□□□ -0.18
CLIP4-201ENST00000320081 VSIRQ9H7M9 311 aa13.92□□□□□ -0.18
CLIP4-201ENST00000320081 CXorf65A6NEN9 183 aa13.92□□□□□ -0.18
CLIP4-201ENST00000320081 CEACAM18A8MTB9 384 aa13.92□□□□□ -0.18
CLIP4-201ENST00000320081 PRRX1P54821 245 aa13.92□□□□□ -0.18
CLIP4-201ENST00000320081 HLA-DRB5Q30154 266 aa13.92□□□□□ -0.18
CLIP4-201ENST00000320081 KIR3DL3Q8N743 410 aa13.92□□□□□ -0.18
CLIP4-201ENST00000320081 TBX15Q96SF7 602 aa13.92□□□□□ -0.18
CLIP4-201ENST00000320081 CXorf1O96002 111 aa13.92□□□□□ -0.18
CLIP4-201ENST00000320081 GGNQ86UU5 652 aa13.92□□□□□ -0.18
CLIP4-201ENST00000320081 ZNF714Q96N38 554 aa13.92□□□□□ -0.18
CLIP4-201ENST00000320081 FAM87AP0C7U9 286 aa13.91□□□□□ -0.18
CLIP4-201ENST00000320081 VSTM2AQ8TAG5 236 aa13.91□□□□□ -0.18
CLIP4-201ENST00000320081 NPIPB3Q92617 1050 aa13.91□□□□□ -0.18
CLIP4-201ENST00000320081 HSPB9Q9BQS6 159 aa13.91□□□□□ -0.18
CLIP4-201ENST00000320081 LYNX1G3V0Z9 82 aa13.91□□□□□ -0.18
CLIP4-201ENST00000320081 LYNX1P0DP58 116 aa13.91□□□□□ -0.18
CLIP4-201ENST00000320081 CCL3L1P16619 93 aa13.91□□□□□ -0.18
CLIP4-201ENST00000320081 CD24P25063 80 aa13.91□□□□□ -0.18
CLIP4-201ENST00000320081 SPCS3P61009 180 aa13.91□□□□□ -0.18
CLIP4-201ENST00000320081 ZNF385CQ66K41 422 aaPredicted RBP13.91□□□□□ -0.18
CLIP4-201ENST00000320081 ZBTB34Q8NCN2 500 aa13.91□□□□□ -0.18
CLIP4-201ENST00000320081 IMMP2LQ96T52 175 aa13.91□□□□□ -0.18
CLIP4-201ENST00000320081 TMEM167BQ9NRX6 74 aa13.91□□□□□ -0.18
CLIP4-201ENST00000320081 LOC102723996A0A087X1L8 192 aa13.91□□□□□ -0.18
CLIP4-201ENST00000320081 PTBP3O95758 552 aaKnown RBP13.91□□□□□ -0.18
CLIP4-201ENST00000320081 CBLN1P23435 193 aa13.91□□□□□ -0.18
CLIP4-201ENST00000320081 ZFP36L1Q07352 338 aaKnown RBP13.91□□□□□ -0.18
CLIP4-201ENST00000320081 FAM89BQ8N5H3 189 aa13.91□□□□□ -0.18
CLIP4-201ENST00000320081 GATAD1Q8WUU5 269 aa13.91□□□□□ -0.18
CLIP4-201ENST00000320081 NDFIP1Q9BT67 221 aa13.91□□□□□ -0.18
CLIP4-201ENST00000320081 CISD1Q9NZ45 108 aaKnown RBP13.91□□□□□ -0.18
CLIP4-201ENST00000320081 PCDH15Q96QU1 1955 aa13.91□□□□□ -0.18
CLIP4-201ENST00000320081 M0R2Z0 102 aa13.9□□□□□ -0.18
CLIP4-201ENST00000320081 LDLRAD4O15165 306 aa13.9□□□□□ -0.18
CLIP4-201ENST00000320081 OR5AL1P0C617 328 aa13.9□□□□□ -0.18
CLIP4-201ENST00000320081 ATP5G3P48201 142 aa13.9□□□□□ -0.18
CLIP4-201ENST00000320081 RAB1CQ92928 201 aa13.9□□□□□ -0.18
CLIP4-201ENST00000320081 RASL11BQ9BPW5 248 aa13.9□□□□□ -0.18
CLIP4-201ENST00000320081 WDR61Q9GZS3 305 aaKnown RBP13.9□□□□□ -0.18
CLIP4-201ENST00000320081 PITPNC1Q9UKF7 332 aa13.9□□□□□ -0.18
CLIP4-201ENST00000320081 IGHV3OR16-10A0A075B7F0 116 aa13.9□□□□□ -0.18
CLIP4-201ENST00000320081 MUC21A0A0G2JKD1 596 aa13.9□□□□□ -0.18
CLIP4-201ENST00000320081 MUC21A0A140T8X8 626 aa13.9□□□□□ -0.18
CLIP4-201ENST00000320081 MUC21Q5SSG8 566 aa13.9□□□□□ -0.18
CLIP4-201ENST00000320081 C1orf185Q5T7R7 199 aa13.9□□□□□ -0.18
CLIP4-201ENST00000320081 Q6ZN92 141 aa13.9□□□□□ -0.18
CLIP4-201ENST00000320081 NUDT16L1Q9BRJ7 211 aaKnown RBP13.9□□□□□ -0.18
CLIP4-201ENST00000320081 ELOVL1Q9BW60 279 aa13.9□□□□□ -0.18
CLIP4-201ENST00000320081 PNRC2Q9NPJ4 139 aaKnown RBP13.9□□□□□ -0.18
CLIP4-201ENST00000320081 AHRRA9YTQ3 701 aa13.9□□□□□ -0.18
CLIP4-201ENST00000320081 RPL8P62917 257 aaKnown RBP13.9□□□□□ -0.18
CLIP4-201ENST00000320081 FAM53AQ6NSI3 398 aaPredicted RBP13.9□□□□□ -0.18
CLIP4-201ENST00000320081 PRNTQ86SH4 94 aa13.9□□□□□ -0.18
CLIP4-201ENST00000320081 LINC00596Q86U02 117 aa13.9□□□□□ -0.18
CLIP4-201ENST00000320081 UFC1Q9Y3C8 167 aa13.9□□□□□ -0.18
CLIP4-201ENST00000320081 ACP1P24666 158 aa13.9□□□□□ -0.19
CLIP4-201ENST00000320081 UCP3P55916 312 aa13.9□□□□□ -0.19
CLIP4-201ENST00000320081 NHLH1Q02575 133 aa13.9□□□□□ -0.19
CLIP4-201ENST00000320081 CRYGSP22914 178 aa13.89□□□□□ -0.19
CLIP4-201ENST00000320081 NUBP1P53384 320 aa13.89□□□□□ -0.19
CLIP4-201ENST00000320081 PAXXQ9BUH6 204 aa13.89□□□□□ -0.19
CLIP4-201ENST00000320081 PLXNB1O43157 2135 aa13.89□□□□□ -0.19
CLIP4-201ENST00000320081 IGHV3-49A0A0A0MS15 119 aa13.89□□□□□ -0.19
CLIP4-201ENST00000320081 PGPA6NDG6 321 aa13.89□□□□□ -0.19
CLIP4-201ENST00000320081 C1QTNF9BB2RNN3 333 aa13.89□□□□□ -0.19
CLIP4-201ENST00000320081 E9PQ18 207 aa13.89□□□□□ -0.19
CLIP4-201ENST00000320081 TCAPO15273 167 aa13.89□□□□□ -0.19
CLIP4-201ENST00000320081 PSPNO60542 156 aa13.89□□□□□ -0.19
CLIP4-201ENST00000320081 ORM1P02763 201 aa13.89□□□□□ -0.19
CLIP4-201ENST00000320081 FOXD3Q9UJU5 478 aaPredicted RBP13.89□□□□□ -0.19
CLIP4-201ENST00000320081 LOC389332A0A1B0GUA5 103 aa13.89□□□□□ -0.19
CLIP4-201ENST00000320081 PQLC2LA1A4F0 135 aa13.89□□□□□ -0.19
CLIP4-201ENST00000320081 FAM90A10PA6NDY2 464 aa13.89□□□□□ -0.19
CLIP4-201ENST00000320081 FAM90A18PA6NE21 464 aa13.89□□□□□ -0.19
CLIP4-201ENST00000320081 FAM90A16PA6NEW6 464 aa13.89□□□□□ -0.19
CLIP4-201ENST00000320081 FAM90A20PA6NIJ5 464 aa13.89□□□□□ -0.19
CLIP4-201ENST00000320081 FAM90A8PA6NJQ4 464 aa13.89□□□□□ -0.19
CLIP4-201ENST00000320081 FAM90A7PA6NKC0 464 aa13.89□□□□□ -0.19
CLIP4-201ENST00000320081 FAM90A22PA8MWA6 464 aa13.89□□□□□ -0.19
CLIP4-201ENST00000320081 FAM90A12PA8MX19 464 aa13.89□□□□□ -0.19
CLIP4-201ENST00000320081 FAM90A5PA8MXJ8 464 aa13.89□□□□□ -0.19
CLIP4-201ENST00000320081 FAM90A23PA8MXZ1 464 aa13.89□□□□□ -0.19
CLIP4-201ENST00000320081 B4DEV8 164 aa13.89□□□□□ -0.19
CLIP4-201ENST00000320081 P01737 135 aa13.89□□□□□ -0.19
CLIP4-201ENST00000320081 FAM90A15PP0C7V4 464 aa13.89□□□□□ -0.19
CLIP4-201ENST00000320081 FAM90A13PP0C7W8 464 aa13.89□□□□□ -0.19
CLIP4-201ENST00000320081 FAM90A14PP0C7W9 464 aa13.89□□□□□ -0.19
CLIP4-201ENST00000320081 FAM90A24PP0C7X0 464 aa13.89□□□□□ -0.19
CLIP4-201ENST00000320081 DOPEY1Q5JWR5 2465 aa13.89□□□□□ -0.19
CLIP4-201ENST00000320081 ACP7Q6ZNF0 438 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms