RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 IGLV2-14P01704 120 aa12.98□□□□□ -0.33
SHROOM1-201ENST00000319854 BMP5P22003 454 aa12.98□□□□□ -0.33
SHROOM1-201ENST00000319854 SERF2P84101 59 aa12.98□□□□□ -0.33
SHROOM1-201ENST00000319854 ACSF3Q4G176 576 aaPredicted RBP12.98□□□□□ -0.33
SHROOM1-201ENST00000319854 INO80CQ6PI98 192 aaPredicted RBP12.98□□□□□ -0.33
SHROOM1-201ENST00000319854 Q6ZS49 121 aa12.98□□□□□ -0.33
SHROOM1-201ENST00000319854 TP53TG3Q9ULZ0 132 aa12.98□□□□□ -0.33
SHROOM1-201ENST00000319854 DUXBA0A1W2PPF3 345 aa12.97□□□□□ -0.33
SHROOM1-201ENST00000319854 SPANXN5Q5MJ07 72 aa12.97□□□□□ -0.33
SHROOM1-201ENST00000319854 DRAM1Q8N682 238 aa12.97□□□□□ -0.33
SHROOM1-201ENST00000319854 RAB40CQ96S21 281 aa12.97□□□□□ -0.33
SHROOM1-201ENST00000319854 MIEN1Q9BRT3 115 aa12.97□□□□□ -0.33
SHROOM1-201ENST00000319854 PGPEP1LA6NFU8 196 aa12.97□□□□□ -0.33
SHROOM1-201ENST00000319854 C12orf77C9JDV5 145 aa12.97□□□□□ -0.33
SHROOM1-201ENST00000319854 M0R1B8 84 aa12.97□□□□□ -0.33
SHROOM1-201ENST00000319854 SYNGR2O43760 224 aa12.97□□□□□ -0.33
SHROOM1-201ENST00000319854 IGHG3P01860 377 aa12.97□□□□□ -0.33
SHROOM1-201ENST00000319854 IL6RP08887 468 aaPredicted RBP12.97□□□□□ -0.33
SHROOM1-201ENST00000319854 FAM201AQ5SY85 155 aa12.97□□□□□ -0.33
SHROOM1-201ENST00000319854 TPTE2P1Q5T6R2 138 aa12.97□□□□□ -0.33
SHROOM1-201ENST00000319854 TAF15Q92804 592 aaKnown RBP eCLIP12.97□□□□□ -0.33
SHROOM1-201ENST00000319854 KCNIP1Q9NZI2 227 aa12.97□□□□□ -0.33
SHROOM1-201ENST00000319854 PROCRQ9UNN8 238 aa12.97□□□□□ -0.33
SHROOM1-201ENST00000319854 CRYABP02511 175 aaKnown RBP12.97□□□□□ -0.33
SHROOM1-201ENST00000319854 LINC00310P59036 64 aa12.97□□□□□ -0.33
SHROOM1-201ENST00000319854 ERVK11-1P61568 191 aa12.97□□□□□ -0.33
SHROOM1-201ENST00000319854 OR8G2PQ6IF36 304 aa12.97□□□□□ -0.33
SHROOM1-201ENST00000319854 ANAPC16Q96DE5 110 aa12.97□□□□□ -0.33
SHROOM1-201ENST00000319854 TMEM106BQ9NUM4 274 aa12.97□□□□□ -0.33
SHROOM1-201ENST00000319854 PXMP4Q9Y6I8 212 aa12.97□□□□□ -0.33
SHROOM1-201ENST00000319854 BSNQ9UPA5 3926 aa12.97□□□□□ -0.33
SHROOM1-201ENST00000319854 KLK10O43240 276 aa12.96□□□□□ -0.33
SHROOM1-201ENST00000319854 SIAH2O43255 324 aa12.96□□□□□ -0.33
SHROOM1-201ENST00000319854 IGKV1-5P01602 117 aa12.96□□□□□ -0.33
SHROOM1-201ENST00000319854 PSMB3P49720 205 aa12.96□□□□□ -0.33
SHROOM1-201ENST00000319854 SPRNQ5BIV9 151 aa12.96□□□□□ -0.33
SHROOM1-201ENST00000319854 DKK4Q9UBT3 224 aa12.96□□□□□ -0.33
SHROOM1-201ENST00000319854 SPTBN4Q9H254 2564 aa12.96□□□□□ -0.33
SHROOM1-201ENST00000319854 IQCF6A8MYZ5 107 aa12.96□□□□□ -0.33
SHROOM1-201ENST00000319854 PRR33A8MZF0 331 aa12.96□□□□□ -0.33
SHROOM1-201ENST00000319854 TMEM250H0YL14 139 aa12.96□□□□□ -0.33
SHROOM1-201ENST00000319854 PAGE4O60829 102 aa12.96□□□□□ -0.33
SHROOM1-201ENST00000319854 TNFSF13O75888 250 aa12.96□□□□□ -0.33
SHROOM1-201ENST00000319854 ADMP35318 185 aa12.96□□□□□ -0.33
SHROOM1-201ENST00000319854 G6PCP35575 357 aa12.96□□□□□ -0.33
SHROOM1-201ENST00000319854 SRP14P37108 136 aaKnown RBP12.96□□□□□ -0.33
SHROOM1-201ENST00000319854 LINC00596Q86U02 117 aa12.96□□□□□ -0.33
SHROOM1-201ENST00000319854 ZADH2Q8N4Q0 377 aa12.96□□□□□ -0.33
SHROOM1-201ENST00000319854 STARD4Q96DR4 205 aa12.96□□□□□ -0.33
SHROOM1-201ENST00000319854 IGHV1-18A0A0C4DH31 117 aa12.95□□□□□ -0.34
SHROOM1-201ENST00000319854 C11orf53Q8IXP5 236 aa12.95□□□□□ -0.34
SHROOM1-201ENST00000319854 LRRC29Q8WV35 223 aa12.95□□□□□ -0.34
SHROOM1-201ENST00000319854 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.95□□□□□ -0.34
SHROOM1-201ENST00000319854 HBZP02008 142 aa12.95□□□□□ -0.34
SHROOM1-201ENST00000319854 WDR82Q6UXN9 313 aa12.95□□□□□ -0.34
SHROOM1-201ENST00000319854 ZNF114Q8NC26 417 aa12.95□□□□□ -0.34
SHROOM1-201ENST00000319854 NINJ1Q92982 152 aa12.95□□□□□ -0.34
SHROOM1-201ENST00000319854 GALMQ96C23 342 aa12.95□□□□□ -0.34
SHROOM1-201ENST00000319854 C20orf144Q9BQM9 153 aa12.95□□□□□ -0.34
SHROOM1-201ENST00000319854 ABCA4P78363 2273 aa12.95□□□□□ -0.34
SHROOM1-201ENST00000319854 LRBAP50851 2863 aa12.95□□□□□ -0.34
SHROOM1-201ENST00000319854 IGHV2OR16-5A0A0B4J2B6 119 aa12.95□□□□□ -0.34
SHROOM1-201ENST00000319854 SPRY3O43610 288 aa12.95□□□□□ -0.34
SHROOM1-201ENST00000319854 IGKV3-15P01624 115 aa12.95□□□□□ -0.34
SHROOM1-201ENST00000319854 C1QTNF9P0C862 333 aa12.95□□□□□ -0.34
SHROOM1-201ENST00000319854 CD82P27701 267 aa12.95□□□□□ -0.34
SHROOM1-201ENST00000319854 MSMPQ1L6U9 139 aa12.95□□□□□ -0.34
SHROOM1-201ENST00000319854 ZNF585BQ52M93 769 aa12.95□□□□□ -0.34
SHROOM1-201ENST00000319854 TEX43Q6ZNM6 134 aa12.95□□□□□ -0.34
SHROOM1-201ENST00000319854 Q8IYB0 196 aa12.95□□□□□ -0.34
SHROOM1-201ENST00000319854 IMMP2LQ96T52 175 aa12.95□□□□□ -0.34
SHROOM1-201ENST00000319854 DERL1Q9BUN8 251 aa12.95□□□□□ -0.34
SHROOM1-201ENST00000319854 RNF114Q9Y508 228 aa12.95□□□□□ -0.34
SHROOM1-201ENST00000319854 AQP7O14520 342 aa12.94□□□□□ -0.34
SHROOM1-201ENST00000319854 TM4SF5O14894 197 aa12.94□□□□□ -0.34
SHROOM1-201ENST00000319854 CRYAAP02489 173 aa12.94□□□□□ -0.34
SHROOM1-201ENST00000319854 WNT2P09544 360 aa12.94□□□□□ -0.34
SHROOM1-201ENST00000319854 RPL30P62888 115 aaKnown RBP12.94□□□□□ -0.34
SHROOM1-201ENST00000319854 ZNF146Q15072 292 aa12.94□□□□□ -0.34
SHROOM1-201ENST00000319854 ZNF718Q3SXZ3 478 aa12.94□□□□□ -0.34
SHROOM1-201ENST00000319854 SEM1Q6ZVN7 128 aa12.94□□□□□ -0.34
SHROOM1-201ENST00000319854 VN1R17PQ8TDU5 208 aa12.94□□□□□ -0.34
SHROOM1-201ENST00000319854 DNAJC4Q9NNZ3 241 aa12.94□□□□□ -0.34
SHROOM1-201ENST00000319854 TMEM30CPA0ZSE6 113 aa12.94□□□□□ -0.34
SHROOM1-201ENST00000319854 BHLHA15Q7RTS1 189 aaPredicted RBP12.94□□□□□ -0.34
SHROOM1-201ENST00000319854 TMEM144Q7Z5S9 345 aa12.94□□□□□ -0.34
SHROOM1-201ENST00000319854 DEFB108BQ8NET1 73 aa12.94□□□□□ -0.34
SHROOM1-201ENST00000319854 OR13A1Q8NGR1 328 aa12.94□□□□□ -0.34
SHROOM1-201ENST00000319854 CMTM2Q8TAZ6 248 aa12.94□□□□□ -0.34
SHROOM1-201ENST00000319854 PINX1Q96BK5 328 aaKnown RBP12.94□□□□□ -0.34
SHROOM1-201ENST00000319854 COQ2Q96H96 371 aa12.94□□□□□ -0.34
SHROOM1-201ENST00000319854 PSG11Q9UQ72 335 aa12.94□□□□□ -0.34
SHROOM1-201ENST00000319854 F2Z2F3 143 aa12.93□□□□□ -0.34
SHROOM1-201ENST00000319854 FGFRL1Q8N441 504 aa12.93□□□□□ -0.34
SHROOM1-201ENST00000319854 C11orf42Q8N5U0 333 aa12.93□□□□□ -0.34
SHROOM1-201ENST00000319854 RNASE8Q8TDE3 154 aaKnown RBP12.93□□□□□ -0.34
SHROOM1-201ENST00000319854 ARFGEF3Q5TH69 2177 aa12.93□□□□□ -0.34
SHROOM1-201ENST00000319854 CLDN1O95832 211 aa12.93□□□□□ -0.34
SHROOM1-201ENST00000319854 EDDM3BP56851 147 aa12.93□□□□□ -0.34
SHROOM1-201ENST00000319854 ZNRF1Q8ND25 227 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms