RNA–Protein interactions for RNA: ENST00000319432.9

CCDC93-201, Transcript of coiled-coil domain containing 93, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CCDC93, Length 6,896 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-201ENST00000319432 KIR3DP1A8MWS1 328 aa6.25□□□□□ -1.41
CCDC93-201ENST00000319432 IGKV3-11P04433 115 aa6.25□□□□□ -1.41
CCDC93-201ENST00000319432 ARL14EPLP0DKL9 152 aa6.25□□□□□ -1.41
CCDC93-201ENST00000319432 FAM27E3Q08E93 113 aa6.25□□□□□ -1.41
CCDC93-201ENST00000319432 C2orf68Q2NKX9 166 aa6.25□□□□□ -1.41
CCDC93-201ENST00000319432 GFI1BQ5VTD9 330 aa6.25□□□□□ -1.41
CCDC93-201ENST00000319432 NUDT10Q8NFP7 164 aa6.25□□□□□ -1.41
CCDC93-201ENST00000319432 STXBP6Q8NFX7 210 aa6.25□□□□□ -1.41
CCDC93-201ENST00000319432 ZNF488Q96MN9 340 aa6.25□□□□□ -1.41
CCDC93-201ENST00000319432 ZNF430Q9H8G1 570 aaPredicted RBP6.25□□□□□ -1.41
CCDC93-201ENST00000319432 PEF1Q9UBV8 284 aaKnown RBP6.25□□□□□ -1.41
CCDC93-201ENST00000319432 WIPI2Q9Y4P8 454 aa6.25□□□□□ -1.41
CCDC93-201ENST00000319432 NPIPB8E9PQR5 432 aa6.24□□□□□ -1.41
CCDC93-201ENST00000319432 NPIPB9F8W1W9 429 aa6.24□□□□□ -1.41
CCDC93-201ENST00000319432 LINC01387J3KSC0 135 aa6.24□□□□□ -1.41
CCDC93-201ENST00000319432 NPIPB7O75200 414 aa6.24□□□□□ -1.41
CCDC93-201ENST00000319432 ZNF735P0CB33 412 aa6.24□□□□□ -1.41
CCDC93-201ENST00000319432 REG1BP48304 166 aa6.24□□□□□ -1.41
CCDC93-201ENST00000319432 ZP1P60852 638 aa6.24□□□□□ -1.41
CCDC93-201ENST00000319432 C1orf185Q5T7R7 199 aa6.24□□□□□ -1.41
CCDC93-201ENST00000319432 C8orf82Q6P1X6 216 aaPredicted RBP6.24□□□□□ -1.41
CCDC93-201ENST00000319432 TIMD4Q96H15 378 aa6.24□□□□□ -1.41
CCDC93-201ENST00000319432 OR8B2Q96RD0 313 aa6.24□□□□□ -1.41
CCDC93-201ENST00000319432 CCL27Q9Y4X3 112 aa6.24□□□□□ -1.41
CCDC93-201ENST00000319432 TRAV8-6A0A0B4J262 113 aa6.24□□□□□ -1.41
CCDC93-201ENST00000319432 A0A1W2PP11 408 aa6.24□□□□□ -1.41
CCDC93-201ENST00000319432 SLC17A3O00476 420 aa6.24□□□□□ -1.41
CCDC93-201ENST00000319432 PPIHO43447 177 aaKnown RBP6.24□□□□□ -1.41
CCDC93-201ENST00000319432 PDCD6O75340 191 aa6.24□□□□□ -1.41
CCDC93-201ENST00000319432 HPRT1P00492 218 aa6.24□□□□□ -1.41
CCDC93-201ENST00000319432 PMELP40967 661 aa6.24□□□□□ -1.41
CCDC93-201ENST00000319432 P2RY4P51582 365 aa6.24□□□□□ -1.41
CCDC93-201ENST00000319432 RPEQ96AT9 228 aa6.24□□□□□ -1.41
CCDC93-201ENST00000319432 CACFD1Q9UGQ2 172 aa6.24□□□□□ -1.41
CCDC93-201ENST00000319432 CENPVL1A0A0U1RR11 272 aa6.24□□□□□ -1.41
CCDC93-201ENST00000319432 C7orf66A4D0T2 115 aa6.24□□□□□ -1.41
CCDC93-201ENST00000319432 FKBP2P26885 142 aaKnown RBP6.24□□□□□ -1.41
CCDC93-201ENST00000319432 DGAT2L7PQ6IED9 249 aa6.24□□□□□ -1.41
CCDC93-201ENST00000319432 ASB10Q8WXI3 467 aa6.24□□□□□ -1.41
CCDC93-201ENST00000319432 ADAMTS9Q9P2N4 1935 aa6.24□□□□□ -1.41
CCDC93-201ENST00000319432 ISG15P05161 165 aa6.24□□□□□ -1.41
CCDC93-201ENST00000319432 CKS2P33552 79 aa6.24□□□□□ -1.41
CCDC93-201ENST00000319432 SSTR5P35346 364 aa6.24□□□□□ -1.41
CCDC93-201ENST00000319432 KIR2DL2P43627 348 aaPredicted RBP6.24□□□□□ -1.41
CCDC93-201ENST00000319432 RNPS1Q15287 305 aaKnown RBP6.24□□□□□ -1.41
CCDC93-201ENST00000319432 ZNF519Q8TB69 540 aa6.24□□□□□ -1.41
CCDC93-201ENST00000319432 Q8WTZ3 238 aa6.24□□□□□ -1.41
CCDC93-201ENST00000319432 TIMP4Q99727 224 aa6.24□□□□□ -1.41
CCDC93-201ENST00000319432 AUP1Q9Y679 476 aa6.24□□□□□ -1.41
CCDC93-201ENST00000319432 SPCS1Q9Y6A9 102 aa6.24□□□□□ -1.41
CCDC93-201ENST00000319432 VPS13AQ96RL7 3174 aa6.24□□□□□ -1.41
CCDC93-201ENST00000319432 CTXND1A0A1B0GTU2 59 aa6.24□□□□□ -1.41
CCDC93-201ENST00000319432 TGFBR3LH3BV60 316 aa6.24□□□□□ -1.41
CCDC93-201ENST00000319432 IGHV4-39P01824 125 aa6.24□□□□□ -1.41
CCDC93-201ENST00000319432 VMA21Q3ZAQ7 101 aa6.24□□□□□ -1.41
CCDC93-201ENST00000319432 SPANXN1Q5VSR9 72 aa6.24□□□□□ -1.41
CCDC93-201ENST00000319432 NUDT11Q96G61 164 aa6.24□□□□□ -1.41
CCDC93-201ENST00000319432 PXMP4Q9Y6I8 212 aa6.24□□□□□ -1.41
CCDC93-201ENST00000319432 ALPK3Q96L96 1907 aa6.24□□□□□ -1.41
CCDC93-201ENST00000319432 PRSS2P07478 247 aa6.23□□□□□ -1.41
CCDC93-201ENST00000319432 VSIG8P0DPA2 414 aa6.23□□□□□ -1.41
CCDC93-201ENST00000319432 KLF3P57682 345 aaPredicted RBP6.23□□□□□ -1.41
CCDC93-201ENST00000319432 MMDQ15546 238 aa6.23□□□□□ -1.41
CCDC93-201ENST00000319432 LAMTOR1Q6IAA8 161 aa6.23□□□□□ -1.41
CCDC93-201ENST00000319432 H1FOOQ8IZA3 346 aaPredicted RBP6.23□□□□□ -1.41
CCDC93-201ENST00000319432 SFRP2Q96HF1 295 aa6.23□□□□□ -1.41
CCDC93-201ENST00000319432 COA4Q9NYJ1 87 aa6.23□□□□□ -1.41
CCDC93-201ENST00000319432 HSPB7Q9UBY9 170 aa6.23□□□□□ -1.41
CCDC93-201ENST00000319432 PHF3Q92576 2039 aaKnown RBP6.23□□□□□ -1.41
CCDC93-201ENST00000319432 COL4A3Q01955 1670 aa6.23□□□□□ -1.41
CCDC93-201ENST00000319432 FREM1Q5H8C1 2179 aa6.23□□□□□ -1.41
CCDC93-201ENST00000319432 GBF1Q92538 1859 aa6.23□□□□□ -1.41
CCDC93-201ENST00000319432 AHRRA9YTQ3 701 aa6.23□□□□□ -1.41
CCDC93-201ENST00000319432 IL4P05112 153 aa6.23□□□□□ -1.41
CCDC93-201ENST00000319432 FOXA3P55318 350 aaPredicted RBP6.23□□□□□ -1.41
CCDC93-201ENST00000319432 SAPCD1Q5SSQ6 148 aa6.23□□□□□ -1.41
CCDC93-201ENST00000319432 ALX4Q9H161 411 aaPredicted RBP6.23□□□□□ -1.41
CCDC93-201ENST00000319432 PCDH15Q96QU1 1955 aa6.23□□□□□ -1.41
CCDC93-201ENST00000319432 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.23□□□□□ -1.41
CCDC93-201ENST00000319432 K7EM74 188 aa6.23□□□□□ -1.41
CCDC93-201ENST00000319432 HLA-DQB1P01920 261 aa6.23□□□□□ -1.41
CCDC93-201ENST00000319432 OR4A8P0C604 315 aa6.23□□□□□ -1.41
CCDC93-201ENST00000319432 FCGR2BP31994 310 aaPredicted RBP6.23□□□□□ -1.41
CCDC93-201ENST00000319432 GNG3P63215 75 aa6.23□□□□□ -1.41
CCDC93-201ENST00000319432 PEAR1Q5VY43 1037 aaPredicted RBP6.23□□□□□ -1.41
CCDC93-201ENST00000319432 C1orf122Q6ZSJ8 110 aa6.23□□□□□ -1.41
CCDC93-201ENST00000319432 FAM214BQ7L5A3 538 aa6.23□□□□□ -1.41
CCDC93-201ENST00000319432 SPSB1Q96BD6 273 aa6.23□□□□□ -1.41
CCDC93-201ENST00000319432 RALGAPA2Q2PPJ7 1873 aa6.23□□□□□ -1.41
CCDC93-201ENST00000319432 FRMPD3Q5JV73 1810 aa6.23□□□□□ -1.41
CCDC93-201ENST00000319432 PPIAL4DF5H284 164 aa6.23□□□□□ -1.41
CCDC93-201ENST00000319432 IGHV3-48P01763 117 aa6.23□□□□□ -1.41
CCDC93-201ENST00000319432 SUMO3P55854 103 aaPredicted RBP6.23□□□□□ -1.41
CCDC93-201ENST00000319432 ATP5J2P56134 94 aa6.23□□□□□ -1.41
CCDC93-201ENST00000319432 RBPMS2Q6ZRY4 209 aaKnown RBP6.23□□□□□ -1.41
CCDC93-201ENST00000319432 PAXXQ9BUH6 204 aa6.23□□□□□ -1.41
CCDC93-201ENST00000319432 SAP30LQ9HAJ7 183 aa6.23□□□□□ -1.41
CCDC93-201ENST00000319432 JKAMPQ9P055 326 aa6.23□□□□□ -1.41
CCDC93-201ENST00000319432 ANKRD36A6QL64 1941 aa6.23□□□□□ -1.41
CCDC93-201ENST00000319432 TMEM238LA0A1B0GVL6 79 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms