RNA–Protein interactions for RNA: ENST00000318024.8

USH1C-202, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USH1C, Length 2,237 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-202ENST00000318024 IQCF6A8MYZ5 107 aa13.21□□□□□ -0.29
USH1C-202ENST00000318024 GCH1P30793 250 aa13.21□□□□□ -0.29
USH1C-202ENST00000318024 CA7P43166 264 aa13.21□□□□□ -0.29
USH1C-202ENST00000318024 GNG3P63215 75 aa13.21□□□□□ -0.29
USH1C-202ENST00000318024 FGFRL1Q8N441 504 aa13.21□□□□□ -0.29
USH1C-202ENST00000318024 OR4F5Q8NH21 305 aa13.21□□□□□ -0.29
USH1C-202ENST00000318024 OR4F4Q96R69 305 aa13.21□□□□□ -0.29
USH1C-202ENST00000318024 IMMP2LQ96T52 175 aa13.21□□□□□ -0.29
USH1C-202ENST00000318024 LIN7CQ9NUP9 197 aaKnown RBP13.21□□□□□ -0.29
USH1C-202ENST00000318024 GRPP07492 148 aa13.21□□□□□ -0.29
USH1C-202ENST00000318024 ATP6V1FQ16864 119 aa13.21□□□□□ -0.29
USH1C-202ENST00000318024 C21orf62-AS1Q17RA5 79 aa13.21□□□□□ -0.29
USH1C-202ENST00000318024 ZNF718Q3SXZ3 478 aa13.21□□□□□ -0.29
USH1C-202ENST00000318024 MRPL41Q8IXM3 137 aaKnown RBP13.21□□□□□ -0.29
USH1C-202ENST00000318024 NEIL1Q96FI4 390 aaPredicted RBP13.21□□□□□ -0.29
USH1C-202ENST00000318024 ELOVL5Q9NYP7 299 aa13.21□□□□□ -0.29
USH1C-202ENST00000318024 NUPR1O60356 82 aa13.2□□□□□ -0.3
USH1C-202ENST00000318024 HOXA4Q00056 320 aaPredicted RBP13.2□□□□□ -0.3
USH1C-202ENST00000318024 VWC2Q2TAL6 325 aa13.2□□□□□ -0.3
USH1C-202ENST00000318024 OR8G2PQ6IF36 304 aa13.2□□□□□ -0.3
USH1C-202ENST00000318024 ZNF573Q86YE8 665 aa13.2□□□□□ -0.3
USH1C-202ENST00000318024 FAM58AQ8N1B3 248 aa13.2□□□□□ -0.3
USH1C-202ENST00000318024 DRAM1Q8N682 238 aa13.2□□□□□ -0.3
USH1C-202ENST00000318024 Q8N7P7 452 aa13.2□□□□□ -0.3
USH1C-202ENST00000318024 OR10G9Q8NGN4 311 aa13.2□□□□□ -0.3
USH1C-202ENST00000318024 OR10G7Q8NGN6 311 aa13.2□□□□□ -0.3
USH1C-202ENST00000318024 TMEM147Q9BVK8 224 aa13.2□□□□□ -0.3
USH1C-202ENST00000318024 CBLN4Q9NTU7 201 aa13.2□□□□□ -0.3
USH1C-202ENST00000318024 FKBP11Q9NYL4 201 aa13.2□□□□□ -0.3
USH1C-202ENST00000318024 PXMP4Q9Y6I8 212 aa13.2□□□□□ -0.3
USH1C-202ENST00000318024 CDIPTO14735 213 aa13.2□□□□□ -0.3
USH1C-202ENST00000318024 TMPRSS2O15393 492 aa13.2□□□□□ -0.3
USH1C-202ENST00000318024 PAGE4O60829 102 aa13.2□□□□□ -0.3
USH1C-202ENST00000318024 MBP02144 154 aa13.2□□□□□ -0.3
USH1C-202ENST00000318024 CD99P14209 185 aa13.2□□□□□ -0.3
USH1C-202ENST00000318024 Q6ZR03 302 aa13.2□□□□□ -0.3
USH1C-202ENST00000318024 LINC01551Q86U37 167 aa13.2□□□□□ -0.3
USH1C-202ENST00000318024 IL1F10Q8WWZ1 152 aa13.2□□□□□ -0.3
USH1C-202ENST00000318024 RTL8AQ9BWD3 113 aa13.2□□□□□ -0.3
USH1C-202ENST00000318024 TRAV39A0A0B4J263 110 aa13.19□□□□□ -0.3
USH1C-202ENST00000318024 OR5B21A6NL26 309 aa13.19□□□□□ -0.3
USH1C-202ENST00000318024 FAM90A27PA6NNH2 459 aa13.19□□□□□ -0.3
USH1C-202ENST00000318024 M0R143 59 aa13.19□□□□□ -0.3
USH1C-202ENST00000318024 YPEL1O60688 119 aa13.19□□□□□ -0.3
USH1C-202ENST00000318024 CD40P25942 277 aa13.19□□□□□ -0.3
USH1C-202ENST00000318024 EIF4EBP1Q13541 118 aaPredicted RBP13.19□□□□□ -0.3
USH1C-202ENST00000318024 TMEM256Q8N2U0 113 aa13.19□□□□□ -0.3
USH1C-202ENST00000318024 R3HDM4Q96D70 268 aa13.19□□□□□ -0.3
USH1C-202ENST00000318024 WFIKKN1Q96NZ8 548 aa13.19□□□□□ -0.3
USH1C-202ENST00000318024 YPEL2Q96QA6 119 aa13.19□□□□□ -0.3
USH1C-202ENST00000318024 ICE1Q9Y2F5 2266 aa13.19□□□□□ -0.3
USH1C-202ENST00000318024 CLDN1O95832 211 aa13.19□□□□□ -0.3
USH1C-202ENST00000318024 THBDP07204 575 aa13.19□□□□□ -0.3
USH1C-202ENST00000318024 PCP4P48539 62 aa13.19□□□□□ -0.3
USH1C-202ENST00000318024 ZNF497Q6ZNH5 498 aa13.19□□□□□ -0.3
USH1C-202ENST00000318024 MOB1BQ7L9L4 216 aa13.19□□□□□ -0.3
USH1C-202ENST00000318024 SCCPDHQ8NBX0 429 aa13.19□□□□□ -0.3
USH1C-202ENST00000318024 DIRC2Q96SL1 478 aa13.19□□□□□ -0.3
USH1C-202ENST00000318024 MBNL3Q9NUK0 354 aaKnown RBP13.19□□□□□ -0.3
USH1C-202ENST00000318024 A0A1B0GUS0 222 aa13.18□□□□□ -0.3
USH1C-202ENST00000318024 TFF3Q07654 80 aa13.18□□□□□ -0.3
USH1C-202ENST00000318024 FOXL1Q12952 345 aa13.18□□□□□ -0.3
USH1C-202ENST00000318024 CDSNQ15517 529 aa13.18□□□□□ -0.3
USH1C-202ENST00000318024 TMEM249Q2WGJ8 235 aa13.18□□□□□ -0.3
USH1C-202ENST00000318024 FFAR4Q5NUL3 377 aa13.18□□□□□ -0.3
USH1C-202ENST00000318024 MBNL2Q5VZF2 373 aaKnown RBP13.18□□□□□ -0.3
USH1C-202ENST00000318024 OR1L1Q8NH94 360 aa13.18□□□□□ -0.3
USH1C-202ENST00000318024 PKIBQ9C010 78 aa13.18□□□□□ -0.3
USH1C-202ENST00000318024 DIDO1Q9BTC0 2240 aaKnown RBP13.17□□□□□ -0.3
USH1C-202ENST00000318024 KITLGP21583 273 aa13.17□□□□□ -0.3
USH1C-202ENST00000318024 GNB1P62873 340 aa13.17□□□□□ -0.3
USH1C-202ENST00000318024 FAM78BQ5VT40 261 aa13.17□□□□□ -0.3
USH1C-202ENST00000318024 KCNIP4Q6PIL6 250 aa13.17□□□□□ -0.3
USH1C-202ENST00000318024 ZNF826PQ6ZT77 177 aa13.17□□□□□ -0.3
USH1C-202ENST00000318024 C5orf30Q96GV9 206 aa13.17□□□□□ -0.3
USH1C-202ENST00000318024 NPCDR1Q9BY65 106 aa13.17□□□□□ -0.3
USH1C-202ENST00000318024 NAGKQ9UJ70 344 aa13.17□□□□□ -0.3
USH1C-202ENST00000318024 TMEM238LA0A1B0GVL6 79 aa13.17□□□□□ -0.3
USH1C-202ENST00000318024 TMEM8BA6NDV4 472 aa13.17□□□□□ -0.3
USH1C-202ENST00000318024 GRNP28799 593 aaKnown RBP13.17□□□□□ -0.3
USH1C-202ENST00000318024 CHRNA7P36544 502 aa13.17□□□□□ -0.3
USH1C-202ENST00000318024 BRWD1-AS2P59051 145 aa13.17□□□□□ -0.3
USH1C-202ENST00000318024 WIPI2Q9Y4P8 454 aa13.17□□□□□ -0.3
USH1C-202ENST00000318024 ROS1P08922 2347 aa13.17□□□□□ -0.3
USH1C-202ENST00000318024 DPRXA6NFQ7 191 aa13.16□□□□□ -0.3
USH1C-202ENST00000318024 ZNF16P17020 682 aaPredicted RBP13.16□□□□□ -0.3
USH1C-202ENST00000318024 PRAMEF6Q5VXH4 476 aa13.16□□□□□ -0.3
USH1C-202ENST00000318024 TMEM108Q6UXF1 575 aa13.16□□□□□ -0.3
USH1C-202ENST00000318024 MRPL52Q86TS9 123 aaKnown RBP13.16□□□□□ -0.3
USH1C-202ENST00000318024 TP53TG3Q9ULZ0 132 aa13.16□□□□□ -0.3
USH1C-202ENST00000318024 DOCK11Q5JSL3 2073 aa13.16□□□□□ -0.3
USH1C-202ENST00000318024 LRRC30A6NM36 301 aa13.16□□□□□ -0.3
USH1C-202ENST00000318024 C11orf94C9JXX5 98 aa13.16□□□□□ -0.3
USH1C-202ENST00000318024 RAMP3O60896 148 aa13.16□□□□□ -0.3
USH1C-202ENST00000318024 DEFA4P12838 97 aa13.16□□□□□ -0.3
USH1C-202ENST00000318024 OR10J1P30954 320 aa13.16□□□□□ -0.3
USH1C-202ENST00000318024 GLRXP35754 106 aa13.16□□□□□ -0.3
USH1C-202ENST00000318024 LINC00310P59036 64 aa13.16□□□□□ -0.3
USH1C-202ENST00000318024 YPEL3P61236 119 aaPredicted RBP13.16□□□□□ -0.3
USH1C-202ENST00000318024 ADORA2A-AS1P86434 159 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms