RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 TMSB15BA0A087X1C1 80 aa6.38□□□□□ -1.39
CDHR3-201ENST00000317716 TMEM30CPA0ZSE6 113 aa6.38□□□□□ -1.39
CDHR3-201ENST00000317716 TMEM250H0YL14 139 aa6.38□□□□□ -1.39
CDHR3-201ENST00000317716 M0QZ24 198 aa6.38□□□□□ -1.39
CDHR3-201ENST00000317716 RAMP3O60896 148 aa6.38□□□□□ -1.39
CDHR3-201ENST00000317716 RAC1P63000 192 aa6.38□□□□□ -1.39
CDHR3-201ENST00000317716 BEND2Q8NDZ0 799 aa6.38□□□□□ -1.39
CDHR3-201ENST00000317716 CPEB3Q8NE35 698 aaKnown RBP6.38□□□□□ -1.39
CDHR3-201ENST00000317716 OR8A1Q8NGG7 326 aa6.38□□□□□ -1.39
CDHR3-201ENST00000317716 OR8B3Q8NGG8 313 aa6.38□□□□□ -1.39
CDHR3-201ENST00000317716 FGFBP3Q8TAT2 258 aa6.38□□□□□ -1.39
CDHR3-201ENST00000317716 GPR35Q9HC97 309 aa6.38□□□□□ -1.39
CDHR3-201ENST00000317716 ASCL3Q9NQ33 180 aa6.38□□□□□ -1.39
CDHR3-201ENST00000317716 LOXL2Q9Y4K0 774 aa6.38□□□□□ -1.39
CDHR3-201ENST00000317716 A0A1W2PQM1 296 aa6.38□□□□□ -1.39
CDHR3-201ENST00000317716 ODAMA1E959 279 aa6.38□□□□□ -1.39
CDHR3-201ENST00000317716 COX7A2P2O60397 106 aa6.38□□□□□ -1.39
CDHR3-201ENST00000317716 SLC25A5P05141 298 aaKnown RBP6.38□□□□□ -1.39
CDHR3-201ENST00000317716 FGF12P61328 243 aa6.38□□□□□ -1.39
CDHR3-201ENST00000317716 ACSF3Q4G176 576 aaPredicted RBP6.38□□□□□ -1.39
CDHR3-201ENST00000317716 OCC1Q8TAD7 63 aa6.38□□□□□ -1.39
CDHR3-201ENST00000317716 BCL2L2Q92843 193 aaPredicted RBP6.38□□□□□ -1.39
CDHR3-201ENST00000317716 FLYWCH2Q96CP2 140 aaKnown RBP6.38□□□□□ -1.39
CDHR3-201ENST00000317716 FAM122AQ96E09 287 aa6.38□□□□□ -1.39
CDHR3-201ENST00000317716 CRIM1Q9NZV1 1036 aa6.38□□□□□ -1.39
CDHR3-201ENST00000317716 NCOA6Q14686 2063 aaPredicted RBP6.37□□□□□ -1.39
CDHR3-201ENST00000317716 K7ERU9 68 aa6.37□□□□□ -1.39
CDHR3-201ENST00000317716 NUPR1O60356 82 aa6.37□□□□□ -1.39
CDHR3-201ENST00000317716 CGAP01215 116 aa6.37□□□□□ -1.39
CDHR3-201ENST00000317716 OR8B8Q15620 311 aa6.37□□□□□ -1.39
CDHR3-201ENST00000317716 TBC1D28Q2M2D7 210 aa6.37□□□□□ -1.39
CDHR3-201ENST00000317716 MAJINQ3KP22 176 aa6.37□□□□□ -1.39
CDHR3-201ENST00000317716 PPP1R35Q8TAP8 253 aa6.37□□□□□ -1.39
CDHR3-201ENST00000317716 TAAR6Q96RI8 345 aa6.37□□□□□ -1.39
CDHR3-201ENST00000317716 DCTN5Q9BTE1 182 aa6.37□□□□□ -1.39
CDHR3-201ENST00000317716 NPCDR1Q9BY65 106 aa6.37□□□□□ -1.39
CDHR3-201ENST00000317716 WNT5BQ9H1J7 359 aa6.37□□□□□ -1.39
CDHR3-201ENST00000317716 CLEC5AQ9NY25 188 aa6.37□□□□□ -1.39
CDHR3-201ENST00000317716 ZNF391Q9UJN7 358 aa6.37□□□□□ -1.39
CDHR3-201ENST00000317716 IGHV5-10-1A0A0J9YXX1 117 aa6.37□□□□□ -1.39
CDHR3-201ENST00000317716 LOC389332A0A1B0GUA5 103 aa6.37□□□□□ -1.39
CDHR3-201ENST00000317716 FAM157AC9JC47 383 aa6.37□□□□□ -1.39
CDHR3-201ENST00000317716 F2Z2F3 143 aa6.37□□□□□ -1.39
CDHR3-201ENST00000317716 IGHMP01871 453 aa6.37□□□□□ -1.39
CDHR3-201ENST00000317716 HTR1DP28221 377 aa6.37□□□□□ -1.39
CDHR3-201ENST00000317716 RAC3P60763 192 aa6.37□□□□□ -1.39
CDHR3-201ENST00000317716 GNB1P62873 340 aa6.37□□□□□ -1.39
CDHR3-201ENST00000317716 CENPWQ5EE01 88 aa6.37□□□□□ -1.39
CDHR3-201ENST00000317716 FAM53AQ6NSI3 398 aaPredicted RBP6.37□□□□□ -1.39
CDHR3-201ENST00000317716 STPG3Q8N7X2 389 aa6.37□□□□□ -1.39
CDHR3-201ENST00000317716 H1FXQ92522 213 aaKnown RBP6.37□□□□□ -1.39
CDHR3-201ENST00000317716 ZNF355PQ9NSJ1 428 aa6.37□□□□□ -1.39
CDHR3-201ENST00000317716 BOD1L1Q8NFC6 3051 aa6.37□□□□□ -1.39
CDHR3-201ENST00000317716 PCNX3Q9H6A9 2034 aa6.37□□□□□ -1.39
CDHR3-201ENST00000317716 C17orf98A8MV24 154 aa6.37□□□□□ -1.39
CDHR3-201ENST00000317716 WNT9BO14905 357 aa6.37□□□□□ -1.39
CDHR3-201ENST00000317716 OR2H2O95918 312 aa6.37□□□□□ -1.39
CDHR3-201ENST00000317716 FTH1P19P0C7X4 201 aa6.37□□□□□ -1.39
CDHR3-201ENST00000317716 SSTR5P35346 364 aa6.37□□□□□ -1.39
CDHR3-201ENST00000317716 TAS2R45P59539 299 aa6.37□□□□□ -1.39
CDHR3-201ENST00000317716 HOXA4Q00056 320 aaPredicted RBP6.37□□□□□ -1.39
CDHR3-201ENST00000317716 IBA57Q5T440 356 aaKnown RBP6.37□□□□□ -1.39
CDHR3-201ENST00000317716 RHBDD2Q6NTF9 364 aa6.37□□□□□ -1.39
CDHR3-201ENST00000317716 LHFPL4Q7Z7J7 247 aa6.37□□□□□ -1.39
CDHR3-201ENST00000317716 TGIF2LYQ8IUE0 185 aa6.37□□□□□ -1.39
CDHR3-201ENST00000317716 SCCPDHQ8NBX0 429 aa6.37□□□□□ -1.39
CDHR3-201ENST00000317716 RND1Q92730 232 aa6.37□□□□□ -1.39
CDHR3-201ENST00000317716 TMEM56Q96MV1 263 aa6.37□□□□□ -1.39
CDHR3-201ENST00000317716 GSX1Q9H4S2 264 aaPredicted RBP6.37□□□□□ -1.39
CDHR3-201ENST00000317716 F11RQ9Y624 299 aaKnown RBP6.37□□□□□ -1.39
CDHR3-201ENST00000317716 CEP192Q8TEP8 1941 aa6.37□□□□□ -1.39
CDHR3-201ENST00000317716 GAGE10A6NGK3 116 aa6.36□□□□□ -1.39
CDHR3-201ENST00000317716 MKRN2OSH3BPM6 223 aa6.36□□□□□ -1.39
CDHR3-201ENST00000317716 LILRA1O75019 489 aa6.36□□□□□ -1.39
CDHR3-201ENST00000317716 PFN1P07737 140 aaKnown RBP6.36□□□□□ -1.39
CDHR3-201ENST00000317716 TNFSF4P23510 183 aa6.36□□□□□ -1.39
CDHR3-201ENST00000317716 PPOXP50336 477 aa6.36□□□□□ -1.39
CDHR3-201ENST00000317716 IL15RAQ13261 267 aa6.36□□□□□ -1.39
CDHR3-201ENST00000317716 ZNF726P1Q15940 193 aa6.36□□□□□ -1.39
CDHR3-201ENST00000317716 WDR73Q6P4I2 378 aa6.36□□□□□ -1.39
CDHR3-201ENST00000317716 PRSS3P2Q8NHM4 247 aa6.36□□□□□ -1.39
CDHR3-201ENST00000317716 ZNF501Q96CX3 271 aaPredicted RBP6.36□□□□□ -1.39
CDHR3-201ENST00000317716 SH2D2AQ9NP31 389 aa6.36□□□□□ -1.39
CDHR3-201ENST00000317716 KCNIP2Q9NS61 270 aa6.36□□□□□ -1.39
CDHR3-201ENST00000317716 FBLN5Q9UBX5 448 aa6.36□□□□□ -1.39
CDHR3-201ENST00000317716 SSUH2Q9Y2M2 353 aa6.36□□□□□ -1.39
CDHR3-201ENST00000317716 MED13Q9UHV7 2174 aa6.36□□□□□ -1.39
CDHR3-201ENST00000317716 IGHV3OR15-7A0A075B7D8 119 aa6.36□□□□□ -1.39
CDHR3-201ENST00000317716 CXorf1O96002 111 aa6.36□□□□□ -1.39
CDHR3-201ENST00000317716 MT-CO3P00414 261 aa6.36□□□□□ -1.39
CDHR3-201ENST00000317716 CLPSP04118 112 aa6.36□□□□□ -1.39
CDHR3-201ENST00000317716 FBLN7Q53RD9 439 aa6.36□□□□□ -1.39
CDHR3-201ENST00000317716 FA2HQ7L5A8 372 aa6.36□□□□□ -1.39
CDHR3-201ENST00000317716 KMT5CQ86Y97 462 aa6.36□□□□□ -1.39
CDHR3-201ENST00000317716 SPOCK3Q9BQ16 436 aa6.36□□□□□ -1.39
CDHR3-201ENST00000317716 GNB4Q9HAV0 340 aa6.36□□□□□ -1.39
CDHR3-201ENST00000317716 CLDN16Q9Y5I7 305 aa6.36□□□□□ -1.39
CDHR3-201ENST00000317716 HILPDAQ9Y5L2 63 aa6.36□□□□□ -1.39
CDHR3-201ENST00000317716 TMEM56-RWDD3S4R434 201 aa6.36□□□□□ -1.39
CDHR3-201ENST00000317716 TNFSF13O75888 250 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms