RNA–Protein interactions for RNA: ENST00000315585.11

CHFR-202, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-202ENST00000315585 CTAG1AP78358 180 aa12.32□□□□□ -0.44
CHFR-202ENST00000315585 SLC16A13Q7RTY0 426 aa12.32□□□□□ -0.44
CHFR-202ENST00000315585 ITLN1Q8WWA0 313 aa12.32□□□□□ -0.44
CHFR-202ENST00000315585 RPUSD4Q96CM3 377 aaKnown RBP12.32□□□□□ -0.44
CHFR-202ENST00000315585 PARLQ9H300 379 aa12.32□□□□□ -0.44
CHFR-202ENST00000315585 NPVFQ9HCQ7 196 aa12.32□□□□□ -0.44
CHFR-202ENST00000315585 TMEM140Q9NV12 185 aa12.32□□□□□ -0.44
CHFR-202ENST00000315585 HIST1H2BKO60814 126 aa12.32□□□□□ -0.44
CHFR-202ENST00000315585 PROP1O75360 226 aa12.32□□□□□ -0.44
CHFR-202ENST00000315585 HIST1H2BJP06899 126 aa12.32□□□□□ -0.44
CHFR-202ENST00000315585 FABP1P07148 127 aa12.32□□□□□ -0.44
CHFR-202ENST00000315585 HIST1H2BOP23527 126 aa12.32□□□□□ -0.44
CHFR-202ENST00000315585 HIST1H2BBP33778 126 aa12.32□□□□□ -0.44
CHFR-202ENST00000315585 HIST1H2BDP58876 126 aa12.32□□□□□ -0.44
CHFR-202ENST00000315585 HIST1H2BCP62807 126 aa12.32□□□□□ -0.44
CHFR-202ENST00000315585 TNFAIP6P98066 277 aaPredicted RBP12.32□□□□□ -0.44
CHFR-202ENST00000315585 RELBQ01201 579 aa12.32□□□□□ -0.44
CHFR-202ENST00000315585 HIST2H2BEQ16778 126 aa12.32□□□□□ -0.44
CHFR-202ENST00000315585 PRR30Q53SZ7 412 aaPredicted RBP12.32□□□□□ -0.44
CHFR-202ENST00000315585 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.32□□□□□ -0.44
CHFR-202ENST00000315585 NUP37Q8NFH4 326 aa12.32□□□□□ -0.44
CHFR-202ENST00000315585 HIST1H2BHQ93079 126 aa12.32□□□□□ -0.44
CHFR-202ENST00000315585 HIST1H2BNQ99877 126 aa12.32□□□□□ -0.44
CHFR-202ENST00000315585 HIST1H2BMQ99879 126 aa12.32□□□□□ -0.44
CHFR-202ENST00000315585 SRD5A3Q9H8P0 318 aa12.32□□□□□ -0.44
CHFR-202ENST00000315585 NGBQ9NPG2 151 aa12.32□□□□□ -0.44
CHFR-202ENST00000315585 ACACAQ13085 2346 aa12.31□□□□□ -0.44
CHFR-202ENST00000315585 IGHV3OR15-7A0A075B7D8 119 aa12.31□□□□□ -0.44
CHFR-202ENST00000315585 ZNF729A6NN14 1252 aaPredicted RBP12.31□□□□□ -0.44
CHFR-202ENST00000315585 C11orf94C9JXX5 98 aa12.31□□□□□ -0.44
CHFR-202ENST00000315585 VDAC2P45880 294 aaPredicted RBP12.31□□□□□ -0.44
CHFR-202ENST00000315585 HNF4GQ14541 408 aa12.31□□□□□ -0.44
CHFR-202ENST00000315585 NCMAPQ5T1S8 102 aa12.31□□□□□ -0.44
CHFR-202ENST00000315585 VHLLQ6RSH7 139 aa12.31□□□□□ -0.44
CHFR-202ENST00000315585 SSX9Q7RTT3 188 aa12.31□□□□□ -0.44
CHFR-202ENST00000315585 Q8TCH9 128 aa12.31□□□□□ -0.44
CHFR-202ENST00000315585 FNDC10F2Z333 226 aa12.31□□□□□ -0.44
CHFR-202ENST00000315585 PAGE4O60829 102 aa12.31□□□□□ -0.44
CHFR-202ENST00000315585 RPL23P62829 140 aaKnown RBP12.31□□□□□ -0.44
CHFR-202ENST00000315585 HOXA4Q00056 320 aaPredicted RBP12.31□□□□□ -0.44
CHFR-202ENST00000315585 DDB2Q92466 427 aa12.31□□□□□ -0.44
CHFR-202ENST00000315585 CUL9Q8IWT3 2517 aa12.31□□□□□ -0.44
CHFR-202ENST00000315585 C15orf61A6NNL5 157 aa12.3□□□□□ -0.44
CHFR-202ENST00000315585 VSTM5A8MXK1 200 aa12.3□□□□□ -0.44
CHFR-202ENST00000315585 PPP5D1E7EU14 171 aa12.3□□□□□ -0.44
CHFR-202ENST00000315585 MT-CO2P00403 227 aa12.3□□□□□ -0.44
CHFR-202ENST00000315585 CD99P14209 185 aa12.3□□□□□ -0.44
CHFR-202ENST00000315585 HSPE1P61604 102 aaKnown RBP12.3□□□□□ -0.44
CHFR-202ENST00000315585 RPL39P5Q59GN2 51 aa12.3□□□□□ -0.44
CHFR-202ENST00000315585 SPINK9Q5DT21 86 aa12.3□□□□□ -0.44
CHFR-202ENST00000315585 KCNIP4Q6PIL6 250 aa12.3□□□□□ -0.44
CHFR-202ENST00000315585 TMEM204Q9BSN7 226 aa12.3□□□□□ -0.44
CHFR-202ENST00000315585 PITPNC1Q9UKF7 332 aa12.3□□□□□ -0.44
CHFR-202ENST00000315585 TCF19Q9Y242 345 aa12.3□□□□□ -0.44
CHFR-202ENST00000315585 FOXA2Q9Y261 457 aaPredicted RBP12.3□□□□□ -0.44
CHFR-202ENST00000315585 HMGB3O15347 200 aaKnown RBP12.3□□□□□ -0.44
CHFR-202ENST00000315585 CXorf1O96002 111 aa12.3□□□□□ -0.44
CHFR-202ENST00000315585 TNFRSF1AP19438 455 aa12.3□□□□□ -0.44
CHFR-202ENST00000315585 CCKARP32238 428 aa12.3□□□□□ -0.44
CHFR-202ENST00000315585 SRP14P37108 136 aaKnown RBP12.3□□□□□ -0.44
CHFR-202ENST00000315585 ZNF134P52741 427 aa12.3□□□□□ -0.44
CHFR-202ENST00000315585 MRPS11P82912 194 aaKnown RBP12.3□□□□□ -0.44
CHFR-202ENST00000315585 TLE1Q04724 770 aa12.3□□□□□ -0.44
CHFR-202ENST00000315585 MSMPQ1L6U9 139 aa12.3□□□□□ -0.44
CHFR-202ENST00000315585 RHOVQ96L33 236 aa12.3□□□□□ -0.44
CHFR-202ENST00000315585 PYGO2Q9BRQ0 406 aa12.3□□□□□ -0.44
CHFR-202ENST00000315585 LINC00574Q9H8X3 128 aa12.3□□□□□ -0.44
CHFR-202ENST00000315585 GCM1Q9NP62 436 aa12.3□□□□□ -0.44
CHFR-202ENST00000315585 PRNDQ9UKY0 176 aa12.3□□□□□ -0.44
CHFR-202ENST00000315585 SFTPCP11686 197 aa12.29□□□□□ -0.44
CHFR-202ENST00000315585 GALR1P47211 349 aa12.29□□□□□ -0.44
CHFR-202ENST00000315585 FAM3BP58499 235 aaPredicted RBP12.29□□□□□ -0.44
CHFR-202ENST00000315585 LINC00205P59089 165 aa12.29□□□□□ -0.44
CHFR-202ENST00000315585 POU2AF1Q16633 256 aa12.29□□□□□ -0.44
CHFR-202ENST00000315585 C17orf58Q2M2W7 97 aa12.29□□□□□ -0.44
CHFR-202ENST00000315585 STUMQ69YW2 141 aa12.29□□□□□ -0.44
CHFR-202ENST00000315585 TREML4Q6UXN2 200 aa12.29□□□□□ -0.44
CHFR-202ENST00000315585 C16orf82Q7Z2V1 217 aa12.29□□□□□ -0.44
CHFR-202ENST00000315585 FKBP11Q9NYL4 201 aa12.29□□□□□ -0.44
CHFR-202ENST00000315585 IDI2-AS1Q9NZ38 188 aa12.29□□□□□ -0.44
CHFR-202ENST00000315585 hADV38S2A0JD32 116 aa12.29□□□□□ -0.44
CHFR-202ENST00000315585 ATXN7O15265 892 aaPredicted RBP12.29□□□□□ -0.44
CHFR-202ENST00000315585 YIF1AO95070 293 aa12.29□□□□□ -0.44
CHFR-202ENST00000315585 PFN1P07737 140 aaKnown RBP12.29□□□□□ -0.44
CHFR-202ENST00000315585 TRGC1P0CF51 173 aa12.29□□□□□ -0.44
CHFR-202ENST00000315585 WFDC8Q8IUA0 241 aa12.29□□□□□ -0.44
CHFR-202ENST00000315585 ST6GALNAC3Q8NDV1 305 aa12.29□□□□□ -0.44
CHFR-202ENST00000315585 OR51G1Q8NGK1 321 aa12.29□□□□□ -0.44
CHFR-202ENST00000315585 GSN-AS1Q9NRJ2 163 aa12.29□□□□□ -0.44
CHFR-202ENST00000315585 ZNF257Q9Y2Q1 563 aa12.29□□□□□ -0.44
CHFR-202ENST00000315585 CHD3Q12873 2000 aaKnown RBP12.29□□□□□ -0.44
CHFR-202ENST00000315585 RTL8BQ17RB0 113 aa12.28□□□□□ -0.44
CHFR-202ENST00000315585 CT45A1Q5HYN5 189 aa12.28□□□□□ -0.44
CHFR-202ENST00000315585 DNLZQ5SXM8 178 aa12.28□□□□□ -0.44
CHFR-202ENST00000315585 TEPPQ6URK8 271 aa12.28□□□□□ -0.44
CHFR-202ENST00000315585 SLC24A4Q8NFF2 622 aa12.28□□□□□ -0.44
CHFR-202ENST00000315585 CT45A3Q8NHU0 189 aa12.28□□□□□ -0.44
CHFR-202ENST00000315585 PLPPR2Q96GM1 343 aa12.28□□□□□ -0.44
CHFR-202ENST00000315585 CHODLQ9H9P2 273 aa12.28□□□□□ -0.44
CHFR-202ENST00000315585 TMEM14BQ9NUH8 114 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms