RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 SRP19P09132 144 aaKnown RBP7.55□□□□□ -1.2
COL6A5-202ENST00000312481 PSG2P11465 335 aa7.55□□□□□ -1.2
COL6A5-202ENST00000312481 TIMM23BQ5SRD1 257 aa7.55□□□□□ -1.2
COL6A5-202ENST00000312481 IFITM10A6NMD0 228 aa7.55□□□□□ -1.2
COL6A5-202ENST00000312481 OOSP1A8MZH6 123 aa7.55□□□□□ -1.2
COL6A5-202ENST00000312481 M0R1B8 84 aa7.55□□□□□ -1.2
COL6A5-202ENST00000312481 FAM106CPP0CH98 169 aa7.55□□□□□ -1.2
COL6A5-202ENST00000312481 PRDX2P32119 198 aa7.55□□□□□ -1.2
COL6A5-202ENST00000312481 CLEC12BQ2HXU8 276 aa7.55□□□□□ -1.2
COL6A5-202ENST00000312481 LRRC75AQ8NAA5 344 aa7.55□□□□□ -1.2
COL6A5-202ENST00000312481 OR4X1Q8NH49 305 aa7.55□□□□□ -1.2
COL6A5-202ENST00000312481 FAM60AQ9NP50 221 aa7.55□□□□□ -1.2
COL6A5-202ENST00000312481 SIRT4Q9Y6E7 314 aaPredicted RBP7.55□□□□□ -1.2
COL6A5-202ENST00000312481 TTC28Q96AY4 2481 aa7.55□□□□□ -1.2
COL6A5-202ENST00000312481 A0A096LPE4 126 aa7.54□□□□□ -1.2
COL6A5-202ENST00000312481 A0A1W2PPZ6 126 aa7.54□□□□□ -1.2
COL6A5-202ENST00000312481 DPF1Q92782 380 aa7.54□□□□□ -1.2
COL6A5-202ENST00000312481 MRPL37Q9BZE1 423 aaKnown RBP7.54□□□□□ -1.2
COL6A5-202ENST00000312481 HCSTQ9UBK5 93 aa7.54□□□□□ -1.2
COL6A5-202ENST00000312481 TNRC6BQ9UPQ9 1833 aaKnown RBP7.54□□□□□ -1.2
COL6A5-202ENST00000312481 IGKV1D-42A0A075B6H8 117 aa7.54□□□□□ -1.2
COL6A5-202ENST00000312481 K7EMI3 77 aa7.54□□□□□ -1.2
COL6A5-202ENST00000312481 ID4P47928 161 aa7.54□□□□□ -1.2
COL6A5-202ENST00000312481 CACNG7P62955 275 aa7.54□□□□□ -1.2
COL6A5-202ENST00000312481 SIGLEC14Q08ET2 396 aa7.54□□□□□ -1.2
COL6A5-202ENST00000312481 TMEM136Q6ZRR5 245 aa7.54□□□□□ -1.2
COL6A5-202ENST00000312481 TMEM144Q7Z5S9 345 aa7.54□□□□□ -1.2
COL6A5-202ENST00000312481 SCGB1D4Q6XE38 83 aa7.54□□□□□ -1.2
COL6A5-202ENST00000312481 PATE1Q8WXA2 126 aa7.54□□□□□ -1.2
COL6A5-202ENST00000312481 SEMA5BQ9P283 1151 aa7.54□□□□□ -1.2
COL6A5-202ENST00000312481 PTPRQQ9UMZ3 2332 aa7.54□□□□□ -1.2
COL6A5-202ENST00000312481 PDE6HQ13956 83 aa7.54□□□□□ -1.2
COL6A5-202ENST00000312481 SPATA31B1PQ5VZV4 182 aa7.54□□□□□ -1.2
COL6A5-202ENST00000312481 VWA1Q6PCB0 445 aa7.54□□□□□ -1.2
COL6A5-202ENST00000312481 OR1K1Q8NGR3 316 aa7.54□□□□□ -1.2
COL6A5-202ENST00000312481 PRR7Q8TB68 274 aa7.54□□□□□ -1.2
COL6A5-202ENST00000312481 ZPLD1Q8TCW7 415 aa7.54□□□□□ -1.2
COL6A5-202ENST00000312481 ORAOV1Q8WV07 137 aa7.54□□□□□ -1.2
COL6A5-202ENST00000312481 TMEM78Q5T7P6 136 aa7.54□□□□□ -1.2
COL6A5-202ENST00000312481 LINC01545Q5VT33 79 aa7.54□□□□□ -1.2
COL6A5-202ENST00000312481 OR1B1Q8NGR6 318 aa7.54□□□□□ -1.2
COL6A5-202ENST00000312481 OR9G1Q8NH87 305 aa7.54□□□□□ -1.2
COL6A5-202ENST00000312481 ARPC1AQ92747 370 aa7.54□□□□□ -1.2
COL6A5-202ENST00000312481 PRDM13Q9H4Q3 707 aa7.54□□□□□ -1.2
COL6A5-202ENST00000312481 ASPHD2Q6ICH7 369 aa7.54□□□□□ -1.2
COL6A5-202ENST00000312481 RLN3Q8WXF3 142 aa7.54□□□□□ -1.2
COL6A5-202ENST00000312481 LPAR2Q9HBW0 351 aa7.54□□□□□ -1.2
COL6A5-202ENST00000312481 ZNF256Q9Y2P7 627 aaPredicted RBP7.54□□□□□ -1.2
COL6A5-202ENST00000312481 IZUMO1RA6ND01 250 aa7.54□□□□□ -1.2
COL6A5-202ENST00000312481 IGKV1D-16P01601 117 aa7.54□□□□□ -1.2
COL6A5-202ENST00000312481 IER3P46695 156 aa7.54□□□□□ -1.2
COL6A5-202ENST00000312481 DLX1P56177 255 aa7.54□□□□□ -1.2
COL6A5-202ENST00000312481 CFHR1Q03591 330 aa7.54□□□□□ -1.2
COL6A5-202ENST00000312481 DCAF10Q5QP82 559 aa7.54□□□□□ -1.2
COL6A5-202ENST00000312481 OLIG3Q7RTU3 272 aa7.54□□□□□ -1.2
COL6A5-202ENST00000312481 KIR2DL4Q99706 377 aa7.54□□□□□ -1.2
COL6A5-202ENST00000312481 SDF2L1Q9HCN8 221 aa7.54□□□□□ -1.2
COL6A5-202ENST00000312481 IGHV4-34P06331 123 aa7.54□□□□□ -1.2
COL6A5-202ENST00000312481 ID3Q02535 119 aa7.54□□□□□ -1.2
COL6A5-202ENST00000312481 ASCL2Q99929 193 aa7.54□□□□□ -1.2
COL6A5-202ENST00000312481 SYNGR3O43761 229 aa7.53□□□□□ -1.2
COL6A5-202ENST00000312481 PRSS1P07477 247 aa7.53□□□□□ -1.2
COL6A5-202ENST00000312481 Q56UQ5 140 aa7.53□□□□□ -1.2
COL6A5-202ENST00000312481 LOC102723996A0A087X1L8 192 aa7.53□□□□□ -1.2
COL6A5-202ENST00000312481 ETV2O00321 342 aaPredicted RBP7.53□□□□□ -1.2
COL6A5-202ENST00000312481 FAM157BP0CG42 384 aa7.53□□□□□ -1.2
COL6A5-202ENST00000312481 EFNB2P52799 333 aa7.53□□□□□ -1.2
COL6A5-202ENST00000312481 HOXA4Q00056 320 aaPredicted RBP7.53□□□□□ -1.2
COL6A5-202ENST00000312481 DTX1Q86Y01 620 aa7.53□□□□□ -1.2
COL6A5-202ENST00000312481 RPH3ALQ9UNE2 315 aa7.53□□□□□ -1.2
COL6A5-202ENST00000312481 TRAV39A0A0B4J263 110 aa7.53□□□□□ -1.2
COL6A5-202ENST00000312481 ARL14EPLP0DKL9 152 aa7.53□□□□□ -1.2
COL6A5-202ENST00000312481 LYPD8Q6UX82 237 aa7.53□□□□□ -1.2
COL6A5-202ENST00000312481 GPR146Q96CH1 333 aa7.53□□□□□ -1.2
COL6A5-202ENST00000312481 HSPB9Q9BQS6 159 aa7.53□□□□□ -1.2
COL6A5-202ENST00000312481 CEBPDP49716 269 aaPredicted RBP7.53□□□□□ -1.2
COL6A5-202ENST00000312481 GAS1P54826 345 aa7.53□□□□□ -1.2
COL6A5-202ENST00000312481 GAGE1Q13065 139 aa7.53□□□□□ -1.2
COL6A5-202ENST00000312481 ZNF441Q8N8Z8 693 aa7.53□□□□□ -1.2
COL6A5-202ENST00000312481 FSCN3Q9NQT6 498 aa7.53□□□□□ -1.2
COL6A5-202ENST00000312481 NEUROG3Q9Y4Z2 214 aa7.53□□□□□ -1.2
COL6A5-202ENST00000312481 C16orf97H3BN30 126 aa7.53□□□□□ -1.2
COL6A5-202ENST00000312481 CA2P00918 260 aa7.53□□□□□ -1.2
COL6A5-202ENST00000312481 PVRIGQ6DKI7 326 aa7.53□□□□□ -1.2
COL6A5-202ENST00000312481 SLC16A13Q7RTY0 426 aa7.53□□□□□ -1.2
COL6A5-202ENST00000312481 OR4C12Q96R67 309 aa7.53□□□□□ -1.2
COL6A5-202ENST00000312481 GNB4Q9HAV0 340 aa7.53□□□□□ -1.2
COL6A5-202ENST00000312481 SH2D7A6NKC9 451 aaPredicted RBP7.53□□□□□ -1.2
COL6A5-202ENST00000312481 FCER1GP30273 86 aa7.53□□□□□ -1.2
COL6A5-202ENST00000312481 RPL27AP46776 148 aaKnown RBP7.53□□□□□ -1.2
COL6A5-202ENST00000312481 ZP1P60852 638 aa7.53□□□□□ -1.2
COL6A5-202ENST00000312481 FAM103A1Q9BTL3 118 aaKnown RBP7.53□□□□□ -1.2
COL6A5-202ENST00000312481 ANAPC10Q9UM13 185 aa7.53□□□□□ -1.2
COL6A5-202ENST00000312481 PAM16Q9Y3D7 125 aa7.53□□□□□ -1.2
COL6A5-202ENST00000312481 MT-CO3P00414 261 aa7.53□□□□□ -1.2
COL6A5-202ENST00000312481 MFAP4P55083 255 aa7.53□□□□□ -1.2
COL6A5-202ENST00000312481 PSG4Q00888 419 aa7.53□□□□□ -1.2
COL6A5-202ENST00000312481 PIGYQ3MUY2 71 aa7.53□□□□□ -1.2
COL6A5-202ENST00000312481 OR4D5Q8NGN0 318 aa7.53□□□□□ -1.2
COL6A5-202ENST00000312481 OR10AC1Q8NH08 325 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms