RNA–Protein interactions for RNA: ENST00000311626.8

HOXB3-201, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-201ENST00000311626 DSCAMO60469 2012 aa20.94■□□□□ 0.94
HOXB3-201ENST00000311626 C1QTNF9P0C862 333 aa20.93■□□□□ 0.94
HOXB3-201ENST00000311626 WFIKKN1Q96NZ8 548 aa20.93■□□□□ 0.94
HOXB3-201ENST00000311626 XKRY2A2RUG3 117 aa20.93■□□□□ 0.94
HOXB3-201ENST00000311626 HRASP01112 189 aa20.93■□□□□ 0.94
HOXB3-201ENST00000311626 RELBQ01201 579 aa20.93■□□□□ 0.94
HOXB3-201ENST00000311626 TCTEX1D1Q8N7M0 179 aa20.93■□□□□ 0.94
HOXB3-201ENST00000311626 S1PR3Q99500 378 aa20.93■□□□□ 0.94
HOXB3-201ENST00000311626 PYGO2Q9BRQ0 406 aa20.93■□□□□ 0.94
HOXB3-201ENST00000311626 ASCL3Q9NQ33 180 aa20.93■□□□□ 0.94
HOXB3-201ENST00000311626 PITPNC1Q9UKF7 332 aa20.93■□□□□ 0.94
HOXB3-201ENST00000311626 ARL14EPLP0DKL9 152 aa20.92■□□□□ 0.94
HOXB3-201ENST00000311626 FAM78BQ5VT40 261 aa20.92■□□□□ 0.94
HOXB3-201ENST00000311626 HINT2Q9BX68 163 aa20.92■□□□□ 0.94
HOXB3-201ENST00000311626 PLCE1Q9P212 2302 aa20.92■□□□□ 0.94
HOXB3-201ENST00000311626 MGST3O14880 152 aa20.92■□□□□ 0.94
HOXB3-201ENST00000311626 HIST1H1BP16401 226 aaKnown RBP20.92■□□□□ 0.94
HOXB3-201ENST00000311626 VDAC2P45880 294 aaPredicted RBP20.92■□□□□ 0.94
HOXB3-201ENST00000311626 SPCS3P61009 180 aa20.92■□□□□ 0.94
HOXB3-201ENST00000311626 ZNRD1Q9P1U0 126 aa20.92■□□□□ 0.94
HOXB3-201ENST00000311626 ZNF729A6NN14 1252 aaPredicted RBP20.91■□□□□ 0.94
HOXB3-201ENST00000311626 ERVK-16P61578 105 aa20.91■□□□□ 0.94
HOXB3-201ENST00000311626 TGIF2LYQ8IUE0 185 aa20.91■□□□□ 0.94
HOXB3-201ENST00000311626 FAM122AQ96E09 287 aa20.91■□□□□ 0.94
HOXB3-201ENST00000311626 CALYQ9NYX4 217 aa20.91■□□□□ 0.94
HOXB3-201ENST00000311626 ROS1P08922 2347 aa20.91■□□□□ 0.94
HOXB3-201ENST00000311626 OTOGLQ3ZCN5 2332 aa20.91■□□□□ 0.94
HOXB3-201ENST00000311626 GFRA3O60609 400 aa20.91■□□□□ 0.94
HOXB3-201ENST00000311626 NDUFS6O75380 124 aaKnown RBP20.91■□□□□ 0.94
HOXB3-201ENST00000311626 AMBPP02760 352 aa20.91■□□□□ 0.94
HOXB3-201ENST00000311626 PDLIM3Q53GG5 364 aaPredicted RBP20.91■□□□□ 0.94
HOXB3-201ENST00000311626 SPATA31B1PQ5VZV4 182 aa20.91■□□□□ 0.94
HOXB3-201ENST00000311626 OR2T10Q8NGZ9 312 aa20.91■□□□□ 0.94
HOXB3-201ENST00000311626 PXMP4Q9Y6I8 212 aa20.91■□□□□ 0.94
HOXB3-201ENST00000311626 YLPM1P49750 1951 aaKnown RBP20.91■□□□□ 0.94
HOXB3-201ENST00000311626 OR1P1Q8NH06 330 aa20.91■□□□□ 0.94
HOXB3-201ENST00000311626 JPT1Q9UK76 154 aa20.91■□□□□ 0.94
HOXB3-201ENST00000311626 A0A0U1RQK1 487 aa20.9■□□□□ 0.94
HOXB3-201ENST00000311626 GNG10P50151 68 aa20.9■□□□□ 0.94
HOXB3-201ENST00000311626 ZNF474Q6S9Z5 364 aaPredicted RBP20.9■□□□□ 0.94
HOXB3-201ENST00000311626 LINC01551Q86U37 167 aa20.9■□□□□ 0.94
HOXB3-201ENST00000311626 TMEM183AQ8IXX5 376 aa20.9■□□□□ 0.94
HOXB3-201ENST00000311626 SNRNP40Q96DI7 357 aaKnown RBP20.9■□□□□ 0.94
HOXB3-201ENST00000311626 C1orf159Q96HA4 380 aa20.9■□□□□ 0.94
HOXB3-201ENST00000311626 TCF19Q9Y242 345 aa20.9■□□□□ 0.94
HOXB3-201ENST00000311626 TGOLN2O43493 480 aa20.9■□□□□ 0.94
HOXB3-201ENST00000311626 YPEL1O60688 119 aa20.9■□□□□ 0.94
HOXB3-201ENST00000311626 CT45A1Q5HYN5 189 aa20.9■□□□□ 0.94
HOXB3-201ENST00000311626 CT45A3Q8NHU0 189 aa20.9■□□□□ 0.94
HOXB3-201ENST00000311626 YPEL2Q96QA6 119 aa20.9■□□□□ 0.94
HOXB3-201ENST00000311626 GGTLC1Q9BX51 225 aa20.9■□□□□ 0.94
HOXB3-201ENST00000311626 PARD6AQ9NPB6 346 aa20.9■□□□□ 0.94
HOXB3-201ENST00000311626 IGFL2Q6UWQ7 119 aa20.89■□□□□ 0.93
HOXB3-201ENST00000311626 C22orf34Q6ZV56 151 aa20.89■□□□□ 0.93
HOXB3-201ENST00000311626 C17orf58Q2M2W7 97 aa20.88■□□□□ 0.93
HOXB3-201ENST00000311626 TRAT1Q6PIZ9 186 aa20.88■□□□□ 0.93
HOXB3-201ENST00000311626 DCAF16Q9NXF7 216 aa20.88■□□□□ 0.93
HOXB3-201ENST00000311626 TNCP24821 2201 aa20.88■□□□□ 0.93
HOXB3-201ENST00000311626 DCHS1Q96JQ0 3298 aa20.88■□□□□ 0.93
HOXB3-201ENST00000311626 A0A1B0GUS0 222 aa20.88■□□□□ 0.93
HOXB3-201ENST00000311626 SCO2A0A1W2PP80 73 aa20.88■□□□□ 0.93
HOXB3-201ENST00000311626 FOXH1O75593 365 aa20.88■□□□□ 0.93
HOXB3-201ENST00000311626 DIRC2Q96SL1 478 aa20.88■□□□□ 0.93
HOXB3-201ENST00000311626 TRBV20OR9-2A0A075B6H5 130 aa20.87■□□□□ 0.93
HOXB3-201ENST00000311626 SAA2-SAA4A0A096LPE2 208 aa20.87■□□□□ 0.93
HOXB3-201ENST00000311626 PRSS46E5RG02 174 aa20.87■□□□□ 0.93
HOXB3-201ENST00000311626 RBFOX2O43251 390 aaKnown RBP eCLIP20.87■□□□□ 0.93
HOXB3-201ENST00000311626 SAA2P0DJI9 122 aaPredicted RBP20.87■□□□□ 0.93
HOXB3-201ENST00000311626 LYG1Q8N1E2 194 aa20.87■□□□□ 0.93
HOXB3-201ENST00000311626 AHRRA9YTQ3 701 aa20.87■□□□□ 0.93
HOXB3-201ENST00000311626 GPX4P36969 197 aaPredicted RBP20.87■□□□□ 0.93
HOXB3-201ENST00000311626 NUBP1P53384 320 aa20.87■□□□□ 0.93
HOXB3-201ENST00000311626 ARSJQ5FYB0 599 aaPredicted RBP20.87■□□□□ 0.93
HOXB3-201ENST00000311626 ANAPC16Q96DE5 110 aa20.87■□□□□ 0.93
HOXB3-201ENST00000311626 ARFGEF3Q5TH69 2177 aa20.86■□□□□ 0.93
HOXB3-201ENST00000311626 MMP23AO75900 390 aa20.86■□□□□ 0.93
HOXB3-201ENST00000311626 THBS3P49746 956 aa20.86■□□□□ 0.93
HOXB3-201ENST00000311626 DEFA6Q01524 100 aa20.86■□□□□ 0.93
HOXB3-201ENST00000311626 SEPSECSQ9HD40 501 aaKnown RBP20.86■□□□□ 0.93
HOXB3-201ENST00000311626 KLF3P57682 345 aaPredicted RBP20.86■□□□□ 0.93
HOXB3-201ENST00000311626 PPP1R35Q8TAP8 253 aa20.86■□□□□ 0.93
HOXB3-201ENST00000311626 YTHDF2Q9Y5A9 579 aaKnown RBP20.86■□□□□ 0.93
HOXB3-201ENST00000311626 F2RL2O00254 374 aa20.85■□□□□ 0.93
HOXB3-201ENST00000311626 IL3RAP26951 378 aa20.85■□□□□ 0.93
HOXB3-201ENST00000311626 MOB3BQ86TA1 216 aa20.85■□□□□ 0.93
HOXB3-201ENST00000311626 ZNF320A2RRD8 509 aa20.85■□□□□ 0.93
HOXB3-201ENST00000311626 OPRK1P41145 380 aa20.85■□□□□ 0.93
HOXB3-201ENST00000311626 OR4A47Q6IF82 309 aa20.85■□□□□ 0.93
HOXB3-201ENST00000311626 PIP4P1Q86T03 277 aa20.85■□□□□ 0.93
HOXB3-201ENST00000311626 DDB2Q92466 427 aa20.85■□□□□ 0.93
HOXB3-201ENST00000311626 CCL13Q99616 98 aa20.85■□□□□ 0.93
HOXB3-201ENST00000311626 TCF23Q7RTU1 214 aa20.84■□□□□ 0.93
HOXB3-201ENST00000311626 A0A1B0GWJ7 208 aa20.84■□□□□ 0.93
HOXB3-201ENST00000311626 GGCTO75223 188 aaKnown RBP20.84■□□□□ 0.93
HOXB3-201ENST00000311626 ACTL6BO94805 426 aa20.84■□□□□ 0.93
HOXB3-201ENST00000311626 IL6RP08887 468 aaPredicted RBP20.84■□□□□ 0.93
HOXB3-201ENST00000311626 RPP30P78346 268 aaKnown RBP20.84■□□□□ 0.93
HOXB3-201ENST00000311626 MZT1Q08AG7 82 aa20.84■□□□□ 0.93
HOXB3-201ENST00000311626 ZMAT5Q9UDW3 170 aaKnown RBP20.84■□□□□ 0.93
HOXB3-201ENST00000311626 CA2P00918 260 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms