RNA–Protein interactions for RNA: ENST00000311487.9

HMGA1-201, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-201ENST00000311487 ZNF66Q6ZN08 573 aa14.51□□□□□ -0.09
HMGA1-201ENST00000311487 ZBTB34Q8NCN2 500 aa14.51□□□□□ -0.09
HMGA1-201ENST00000311487 OR10C1Q96KK4 312 aa14.51□□□□□ -0.09
HMGA1-201ENST00000311487 PRELID3BQ9Y3B1 194 aa14.51□□□□□ -0.09
HMGA1-201ENST00000311487 C3orf85A0A1B0GTC6 90 aa14.51□□□□□ -0.09
HMGA1-201ENST00000311487 RNF222A6NCQ9 220 aa14.51□□□□□ -0.09
HMGA1-201ENST00000311487 BTBD17A6NE02 478 aa14.51□□□□□ -0.09
HMGA1-201ENST00000311487 OR5AC1P0C628 307 aa14.51□□□□□ -0.09
HMGA1-201ENST00000311487 PSMB6P28072 239 aa14.51□□□□□ -0.09
HMGA1-201ENST00000311487 THAP6Q8TBB0 222 aa14.51□□□□□ -0.09
HMGA1-201ENST00000311487 FLYWCH2Q96CP2 140 aaKnown RBP14.51□□□□□ -0.09
HMGA1-201ENST00000311487 NAA60Q9H7X0 242 aa14.51□□□□□ -0.09
HMGA1-201ENST00000311487 MBD2Q9UBB5 411 aa14.51□□□□□ -0.09
HMGA1-201ENST00000311487 A0A0D9SG52 128 aa14.5□□□□□ -0.09
HMGA1-201ENST00000311487 SHOXO15266 292 aa14.5□□□□□ -0.09
HMGA1-201ENST00000311487 OR2F2O95006 317 aa14.5□□□□□ -0.09
HMGA1-201ENST00000311487 S1PR2O95136 353 aa14.5□□□□□ -0.09
HMGA1-201ENST00000311487 HOXB5P09067 269 aa14.5□□□□□ -0.09
HMGA1-201ENST00000311487 S100GP29377 79 aa14.5□□□□□ -0.09
HMGA1-201ENST00000311487 HILS1P60008 231 aa14.5□□□□□ -0.09
HMGA1-201ENST00000311487 CATR1Q13166 79 aa14.5□□□□□ -0.09
HMGA1-201ENST00000311487 OR2F1Q13607 317 aa14.5□□□□□ -0.09
HMGA1-201ENST00000311487 ZNF345Q14585 488 aa14.5□□□□□ -0.09
HMGA1-201ENST00000311487 MMDQ15546 238 aa14.5□□□□□ -0.09
HMGA1-201ENST00000311487 RTL8BQ17RB0 113 aa14.5□□□□□ -0.09
HMGA1-201ENST00000311487 ZNF585BQ52M93 769 aa14.5□□□□□ -0.09
HMGA1-201ENST00000311487 KCNRGQ8N5I3 272 aa14.5□□□□□ -0.09
HMGA1-201ENST00000311487 OR2T10Q8NGZ9 312 aa14.5□□□□□ -0.09
HMGA1-201ENST00000311487 FAM216AQ8WUB2 273 aa14.5□□□□□ -0.09
HMGA1-201ENST00000311487 CLCC1Q96S66 551 aa14.5□□□□□ -0.09
HMGA1-201ENST00000311487 SLC25A33Q9BSK2 321 aa14.5□□□□□ -0.09
HMGA1-201ENST00000311487 VPREB3Q9UKI3 123 aa14.5□□□□□ -0.09
HMGA1-201ENST00000311487 A6NDX4 124 aa14.49□□□□□ -0.09
HMGA1-201ENST00000311487 MC5RP33032 325 aa14.49□□□□□ -0.09
HMGA1-201ENST00000311487 LPAR6P43657 344 aa14.49□□□□□ -0.09
HMGA1-201ENST00000311487 CLLU1Q5K131 121 aa14.49□□□□□ -0.09
HMGA1-201ENST00000311487 GALNT14Q96FL9 552 aa14.49□□□□□ -0.09
HMGA1-201ENST00000311487 C2orf50Q96LR7 162 aa14.49□□□□□ -0.09
HMGA1-201ENST00000311487 HARBI1Q96MB7 349 aa14.49□□□□□ -0.09
HMGA1-201ENST00000311487 TPSG1Q9NRR2 321 aa14.49□□□□□ -0.09
HMGA1-201ENST00000311487 PLXNB1O43157 2135 aa14.49□□□□□ -0.09
HMGA1-201ENST00000311487 FAM181BA6NEQ2 426 aa14.49□□□□□ -0.09
HMGA1-201ENST00000311487 TCF21O43680 179 aa14.49□□□□□ -0.09
HMGA1-201ENST00000311487 M6PRP20645 277 aa14.49□□□□□ -0.09
HMGA1-201ENST00000311487 DYNLT3P51808 116 aa14.49□□□□□ -0.09
HMGA1-201ENST00000311487 BLCAPP62952 87 aa14.49□□□□□ -0.09
HMGA1-201ENST00000311487 TMEM187Q14656 261 aa14.49□□□□□ -0.09
HMGA1-201ENST00000311487 Q6ZS46 218 aa14.49□□□□□ -0.09
HMGA1-201ENST00000311487 CCDC71LQ8N9Z2 235 aa14.49□□□□□ -0.09
HMGA1-201ENST00000311487 ADTRPQ96IZ2 230 aa14.49□□□□□ -0.09
HMGA1-201ENST00000311487 RNF126Q9BV68 326 aa14.49□□□□□ -0.09
HMGA1-201ENST00000311487 LINC00862A6NCI5 91 aa14.48□□□□□ -0.09
HMGA1-201ENST00000311487 H0YIZ8 118 aa14.48□□□□□ -0.09
HMGA1-201ENST00000311487 SLC25A17O43808 307 aa14.48□□□□□ -0.09
HMGA1-201ENST00000311487 B3GALNT1O75752 331 aa14.48□□□□□ -0.09
HMGA1-201ENST00000311487 KRASP01116 189 aa14.48□□□□□ -0.09
HMGA1-201ENST00000311487 IL15RAQ13261 267 aa14.48□□□□□ -0.09
HMGA1-201ENST00000311487 MSMO1Q15800 293 aa14.48□□□□□ -0.09
HMGA1-201ENST00000311487 IZUMO4Q1ZYL8 232 aa14.48□□□□□ -0.09
HMGA1-201ENST00000311487 ACOT7LQ6ZUV0 252 aa14.48□□□□□ -0.09
HMGA1-201ENST00000311487 PDPNQ86YL7 162 aa14.48□□□□□ -0.09
HMGA1-201ENST00000311487 OR4C13Q8NGP0 309 aa14.48□□□□□ -0.09
HMGA1-201ENST00000311487 PCNPQ8WW12 178 aaKnown RBP14.48□□□□□ -0.09
HMGA1-201ENST00000311487 FBXL15Q9H469 300 aa14.48□□□□□ -0.09
HMGA1-201ENST00000311487 KCNIP3Q9Y2W7 256 aa14.48□□□□□ -0.09
HMGA1-201ENST00000311487 RNF212BA8MTL3 300 aa14.47□□□□□ -0.09
HMGA1-201ENST00000311487 G6PCP35575 357 aa14.47□□□□□ -0.09
HMGA1-201ENST00000311487 RND3P61587 244 aa14.47□□□□□ -0.09
HMGA1-201ENST00000311487 CTAG1AP78358 180 aa14.47□□□□□ -0.09
HMGA1-201ENST00000311487 SLC51BQ86UW2 128 aa14.47□□□□□ -0.09
HMGA1-201ENST00000311487 PRIMA1Q86XR5 153 aa14.47□□□□□ -0.09
HMGA1-201ENST00000311487 RBM14Q96PK6 669 aaKnown RBP14.47□□□□□ -0.09
HMGA1-201ENST00000311487 LIN7CQ9NUP9 197 aaKnown RBP14.47□□□□□ -0.09
HMGA1-201ENST00000311487 GPR137BO60478 399 aa14.47□□□□□ -0.09
HMGA1-201ENST00000311487 IGKV1-39P01597 117 aa14.47□□□□□ -0.09
HMGA1-201ENST00000311487 IGKV1D-39P04432 117 aa14.47□□□□□ -0.09
HMGA1-201ENST00000311487 SERPINE2P07093 398 aa14.47□□□□□ -0.09
HMGA1-201ENST00000311487 UBA52P62987 128 aaKnown RBP14.47□□□□□ -0.09
HMGA1-201ENST00000311487 PJVKQ0ZLH3 352 aa14.47□□□□□ -0.09
HMGA1-201ENST00000311487 EBI3Q14213 229 aa14.47□□□□□ -0.09
HMGA1-201ENST00000311487 AANATQ16613 207 aa14.47□□□□□ -0.09
HMGA1-201ENST00000311487 THNSL2Q86YJ6 484 aa14.47□□□□□ -0.09
HMGA1-201ENST00000311487 Q8N6K4 173 aa14.47□□□□□ -0.09
HMGA1-201ENST00000311487 OR4S2Q8NH73 311 aa14.47□□□□□ -0.09
HMGA1-201ENST00000311487 OR5R1Q8NH85 324 aa14.47□□□□□ -0.09
HMGA1-201ENST00000311487 LHFPL5Q8TAF8 219 aa14.47□□□□□ -0.09
HMGA1-201ENST00000311487 GLYATL2Q8WU03 294 aa14.47□□□□□ -0.09
HMGA1-201ENST00000311487 C2CD3Q4AC94 2353 aa14.46□□□□□ -0.09
HMGA1-201ENST00000311487 FCN1O00602 326 aa14.46□□□□□ -0.09
HMGA1-201ENST00000311487 BCL2L11O43521 198 aa14.46□□□□□ -0.09
HMGA1-201ENST00000311487 IGLV2-23P01705 113 aa14.46□□□□□ -0.09
HMGA1-201ENST00000311487 AMY1AP04745 511 aa14.46□□□□□ -0.09
HMGA1-201ENST00000311487 LYL1P12980 280 aa14.46□□□□□ -0.09
HMGA1-201ENST00000311487 PLGLAQ15195 96 aa14.46□□□□□ -0.09
HMGA1-201ENST00000311487 C9orf152Q5JTZ5 239 aa14.46□□□□□ -0.09
HMGA1-201ENST00000311487 GGNBP1Q5YKI7 109 aa14.46□□□□□ -0.09
HMGA1-201ENST00000311487 DCUN1D4Q92564 292 aa14.46□□□□□ -0.09
HMGA1-201ENST00000311487 RAB32Q13637 225 aa14.45□□□□□ -0.1
HMGA1-201ENST00000311487 PRSS54Q6PEW0 395 aa14.45□□□□□ -0.1
HMGA1-201ENST00000311487 ALKAL2Q6UX46 152 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms