RNA–Protein interactions for RNA: ENST00000310571.7

PAAF1-201, Transcript of proteasomal ATPase associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PAAF1, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-201ENST00000310571 ZNF705GA8MUZ8 300 aaPredicted RBP11.4□□□□□ -0.59
PAAF1-201ENST00000310571 CXorf1O96002 111 aa11.4□□□□□ -0.59
PAAF1-201ENST00000310571 SAA2P0DJI9 122 aaPredicted RBP11.4□□□□□ -0.59
PAAF1-201ENST00000310571 WIPF3A6NGB9 483 aa11.39□□□□□ -0.59
PAAF1-201ENST00000310571 K7EM74 188 aa11.39□□□□□ -0.59
PAAF1-201ENST00000310571 GNG4P50150 75 aa11.39□□□□□ -0.59
PAAF1-201ENST00000310571 IGFL2Q6UWQ7 119 aa11.39□□□□□ -0.59
PAAF1-201ENST00000310571 FAM215AQ9Y5M1 114 aa11.39□□□□□ -0.59
PAAF1-201ENST00000310571 LGALS7P47929 136 aa11.39□□□□□ -0.59
PAAF1-201ENST00000310571 C10orf113Q5VZT2 155 aa11.39□□□□□ -0.59
PAAF1-201ENST00000310571 OR4A47Q6IF82 309 aa11.39□□□□□ -0.59
PAAF1-201ENST00000310571 PUSL1Q8N0Z8 303 aaKnown RBP11.39□□□□□ -0.59
PAAF1-201ENST00000310571 FAM216AQ8WUB2 273 aa11.39□□□□□ -0.59
PAAF1-201ENST00000310571 LRP4O75096 1905 aa11.39□□□□□ -0.59
PAAF1-201ENST00000310571 TRBV23-1A0A0A0MS06 115 aa11.39□□□□□ -0.59
PAAF1-201ENST00000310571 TRBV6-6A0A0A6YYG2 114 aa11.39□□□□□ -0.59
PAAF1-201ENST00000310571 ID3Q02535 119 aa11.39□□□□□ -0.59
PAAF1-201ENST00000310571 USF2Q15853 346 aaPredicted RBP11.39□□□□□ -0.59
PAAF1-201ENST00000310571 NEU4Q8WWR8 484 aaPredicted RBP11.39□□□□□ -0.59
PAAF1-201ENST00000310571 IGF2-ASQ6U949 168 aa11.39□□□□□ -0.59
PAAF1-201ENST00000310571 OR4D5Q8NGN0 318 aa11.39□□□□□ -0.59
PAAF1-201ENST00000310571 MRPL20Q9BYC9 149 aaKnown RBP11.39□□□□□ -0.59
PAAF1-201ENST00000310571 WDR61Q9GZS3 305 aaKnown RBP11.39□□□□□ -0.59
PAAF1-201ENST00000310571 SMDT1Q9H4I9 107 aa11.39□□□□□ -0.59
PAAF1-201ENST00000310571 TGOLN2O43493 480 aa11.38□□□□□ -0.59
PAAF1-201ENST00000310571 GALR1P47211 349 aa11.38□□□□□ -0.59
PAAF1-201ENST00000310571 HERPUD1Q15011 391 aa11.38□□□□□ -0.59
PAAF1-201ENST00000310571 UNQ6494/PRO21346Q6UXR6 183 aa11.38□□□□□ -0.59
PAAF1-201ENST00000310571 COQ2Q96H96 371 aa11.38□□□□□ -0.59
PAAF1-201ENST00000310571 HIF1ANQ9NWT6 349 aa11.38□□□□□ -0.59
PAAF1-201ENST00000310571 ZNF785A8K8V0 405 aa11.38□□□□□ -0.59
PAAF1-201ENST00000310571 CDKN1AP38936 164 aa11.38□□□□□ -0.59
PAAF1-201ENST00000310571 PCSK4Q6UW60 755 aa11.38□□□□□ -0.59
PAAF1-201ENST00000310571 NUP37Q8NFH4 326 aa11.38□□□□□ -0.59
PAAF1-201ENST00000310571 RARRES2Q99969 163 aa11.38□□□□□ -0.59
PAAF1-201ENST00000310571 SPP1P10451 314 aa11.38□□□□□ -0.59
PAAF1-201ENST00000310571 COX6B1P14854 86 aa11.38□□□□□ -0.59
PAAF1-201ENST00000310571 Q6ZS49 121 aa11.38□□□□□ -0.59
PAAF1-201ENST00000310571 OSR1Q8TAX0 266 aaPredicted RBP11.38□□□□□ -0.59
PAAF1-201ENST00000310571 TMEM204Q9BSN7 226 aa11.38□□□□□ -0.59
PAAF1-201ENST00000310571 RPRMQ9NS64 109 aa11.38□□□□□ -0.59
PAAF1-201ENST00000310571 USF3Q68DE3 2245 aa11.38□□□□□ -0.59
PAAF1-201ENST00000310571 DBX1A6NMT0 343 aa11.38□□□□□ -0.59
PAAF1-201ENST00000310571 REG1AP05451 166 aa11.38□□□□□ -0.59
PAAF1-201ENST00000310571 ATP5J2P56134 94 aa11.38□□□□□ -0.59
PAAF1-201ENST00000310571 PRB3Q04118 309 aaPredicted RBP11.38□□□□□ -0.59
PAAF1-201ENST00000310571 RAB24Q969Q5 203 aa11.38□□□□□ -0.59
PAAF1-201ENST00000310571 AAMDCQ9H7C9 122 aa11.38□□□□□ -0.59
PAAF1-201ENST00000310571 TNFRSF19Q9NS68 423 aa11.38□□□□□ -0.59
PAAF1-201ENST00000310571 NCOA6Q14686 2063 aaPredicted RBP11.38□□□□□ -0.59
PAAF1-201ENST00000310571 AKAP6Q13023 2319 aa11.37□□□□□ -0.59
PAAF1-201ENST00000310571 CEACAM8P31997 349 aaPredicted RBP11.37□□□□□ -0.59
PAAF1-201ENST00000310571 ECSCRQ19T08 205 aa11.37□□□□□ -0.59
PAAF1-201ENST00000310571 PDPNQ86YL7 162 aa11.37□□□□□ -0.59
PAAF1-201ENST00000310571 IGKV1D-17A0A075B6S4 117 aa11.37□□□□□ -0.59
PAAF1-201ENST00000310571 DUTP33316 252 aaKnown RBP11.37□□□□□ -0.59
PAAF1-201ENST00000310571 ANAPC10Q9UM13 185 aa11.37□□□□□ -0.59
PAAF1-201ENST00000310571 CA2P00918 260 aa11.37□□□□□ -0.59
PAAF1-201ENST00000310571 CLEC3BP05452 202 aa11.37□□□□□ -0.59
PAAF1-201ENST00000310571 ADIPOQQ15848 244 aa11.37□□□□□ -0.59
PAAF1-201ENST00000310571 Q6ZR03 302 aa11.37□□□□□ -0.59
PAAF1-201ENST00000310571 WDR86Q86TI4 376 aa11.37□□□□□ -0.59
PAAF1-201ENST00000310571 SPNS3Q6ZMD2 512 aa11.37□□□□□ -0.59
PAAF1-201ENST00000310571 OR5B3Q8NH48 314 aa11.37□□□□□ -0.59
PAAF1-201ENST00000310571 CBLN4Q9NTU7 201 aa11.37□□□□□ -0.59
PAAF1-201ENST00000310571 G3V3Q6 166 aa11.36□□□□□ -0.59
PAAF1-201ENST00000310571 FBP1P09467 338 aa11.36□□□□□ -0.59
PAAF1-201ENST00000310571 CA7P43166 264 aa11.36□□□□□ -0.59
PAAF1-201ENST00000310571 FABP9Q0Z7S8 132 aa11.36□□□□□ -0.59
PAAF1-201ENST00000310571 SSBP3Q9BWW4 388 aaPredicted RBP11.36□□□□□ -0.59
PAAF1-201ENST00000310571 TOLLIPQ9H0E2 274 aa11.36□□□□□ -0.59
PAAF1-201ENST00000310571 PDE6DO43924 150 aa11.36□□□□□ -0.59
PAAF1-201ENST00000310571 RND2P52198 227 aa11.36□□□□□ -0.59
PAAF1-201ENST00000310571 FAM210BQ96KR6 192 aa11.36□□□□□ -0.59
PAAF1-201ENST00000310571 PSMG3Q9BT73 122 aaPredicted RBP11.36□□□□□ -0.59
PAAF1-201ENST00000310571 AURKAIP1Q9NWT8 199 aaPredicted RBP11.36□□□□□ -0.59
PAAF1-201ENST00000310571 IGHV3-48P01763 117 aa11.36□□□□□ -0.59
PAAF1-201ENST00000310571 SNRPCP09234 159 aaKnown RBP11.36□□□□□ -0.59
PAAF1-201ENST00000310571 LINC00869P0C866 280 aa11.36□□□□□ -0.59
PAAF1-201ENST00000310571 FAM157CP0CG43 387 aa11.36□□□□□ -0.59
PAAF1-201ENST00000310571 ST6GALNAC3Q8NDV1 305 aa11.36□□□□□ -0.59
PAAF1-201ENST00000310571 PERPQ96FX8 193 aa11.36□□□□□ -0.59
PAAF1-201ENST00000310571 RNF24Q9Y225 148 aa11.36□□□□□ -0.59
PAAF1-201ENST00000310571 CLN5O75503 358 aa11.36□□□□□ -0.59
PAAF1-201ENST00000310571 RPL30P62888 115 aaKnown RBP11.36□□□□□ -0.59
PAAF1-201ENST00000310571 MEF2BQ02080 365 aaPredicted RBP11.36□□□□□ -0.59
PAAF1-201ENST00000310571 HABP2Q14520 560 aaPredicted RBP11.36□□□□□ -0.59
PAAF1-201ENST00000310571 IGKV1-6A0A0C4DH72 117 aa11.35□□□□□ -0.59
PAAF1-201ENST00000310571 CEACAM4O75871 244 aa11.35□□□□□ -0.59
PAAF1-201ENST00000310571 HSPB1P04792 205 aaKnown RBP11.35□□□□□ -0.59
PAAF1-201ENST00000310571 FAM106CPP0CH98 169 aa11.35□□□□□ -0.59
PAAF1-201ENST00000310571 HOXA4Q00056 320 aaPredicted RBP11.35□□□□□ -0.59
PAAF1-201ENST00000310571 LRRC75BQ2VPJ9 315 aa11.35□□□□□ -0.59
PAAF1-201ENST00000310571 NDFIP1Q9BT67 221 aa11.35□□□□□ -0.59
PAAF1-201ENST00000310571 NEUROG1Q92886 237 aa11.35□□□□□ -0.59
PAAF1-201ENST00000310571 PIMREGQ9BSJ6 248 aa11.35□□□□□ -0.59
PAAF1-201ENST00000310571 PDLIM4P50479 330 aa11.35□□□□□ -0.59
PAAF1-201ENST00000310571 ZNF525Q8N782 197 aa11.35□□□□□ -0.59
PAAF1-201ENST00000310571 BSCL2Q96G97 398 aaPredicted RBP11.35□□□□□ -0.59
PAAF1-201ENST00000310571 CHRDL1Q9BU40 450 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms