RNA–Protein interactions for RNA: ENST00000308873.10

RUNX3-201, Transcript of runt related transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RUNX3, Length 3,861 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-201ENST00000308873 C5orf30Q96GV9 206 aa12.38□□□□□ -0.43
RUNX3-201ENST00000308873 TAAR6Q96RI8 345 aa12.38□□□□□ -0.43
RUNX3-201ENST00000308873 HSD17B10Q99714 261 aaKnown RBP12.38□□□□□ -0.43
RUNX3-201ENST00000308873 MRPL37Q9BZE1 423 aaKnown RBP12.38□□□□□ -0.43
RUNX3-201ENST00000308873 LINC00470Q9BZP3 86 aa12.38□□□□□ -0.43
RUNX3-201ENST00000308873 SMPD2O60906 423 aa12.37□□□□□ -0.43
RUNX3-201ENST00000308873 OR10J1P30954 320 aa12.37□□□□□ -0.43
RUNX3-201ENST00000308873 GNG10P50151 68 aa12.37□□□□□ -0.43
RUNX3-201ENST00000308873 SRSF7Q16629 238 aaKnown RBP eCLIP12.37□□□□□ -0.43
RUNX3-201ENST00000308873 MRPL18Q9H0U6 180 aaKnown RBP12.37□□□□□ -0.43
RUNX3-201ENST00000308873 PPIAL4AQ9Y536 164 aa12.37□□□□□ -0.43
RUNX3-201ENST00000308873 SPTA1P02549 2419 aa12.37□□□□□ -0.43
RUNX3-201ENST00000308873 F2Z2F3 143 aa12.37□□□□□ -0.43
RUNX3-201ENST00000308873 CLDN14O95500 239 aa12.37□□□□□ -0.43
RUNX3-201ENST00000308873 TRA2AQ13595 282 aaKnown RBP eCLIP12.37□□□□□ -0.43
RUNX3-201ENST00000308873 RNPS1Q15287 305 aaKnown RBP12.37□□□□□ -0.43
RUNX3-201ENST00000308873 FAM201AQ5SY85 155 aa12.37□□□□□ -0.43
RUNX3-201ENST00000308873 TTC28Q96AY4 2481 aa12.37□□□□□ -0.43
RUNX3-201ENST00000308873 TRGV5A0A0B4J1U4 118 aa12.37□□□□□ -0.43
RUNX3-201ENST00000308873 FAM90A26D6RGX4 464 aa12.37□□□□□ -0.43
RUNX3-201ENST00000308873 KLRC4-KLRK1H3BQV0 150 aa12.37□□□□□ -0.43
RUNX3-201ENST00000308873 PDE6DO43924 150 aa12.37□□□□□ -0.43
RUNX3-201ENST00000308873 TPPP2P59282 170 aa12.37□□□□□ -0.43
RUNX3-201ENST00000308873 HLA-DRB5Q30154 266 aa12.37□□□□□ -0.43
RUNX3-201ENST00000308873 SIGLECL1Q8N7X8 197 aa12.37□□□□□ -0.43
RUNX3-201ENST00000308873 RPH3ALQ9UNE2 315 aa12.37□□□□□ -0.43
RUNX3-201ENST00000308873 FOXH1O75593 365 aa12.37□□□□□ -0.43
RUNX3-201ENST00000308873 IGHV3-48P01763 117 aa12.37□□□□□ -0.43
RUNX3-201ENST00000308873 AMTP48728 403 aa12.37□□□□□ -0.43
RUNX3-201ENST00000308873 PSG5Q15238 335 aa12.37□□□□□ -0.43
RUNX3-201ENST00000308873 ZNRF1Q8ND25 227 aa12.37□□□□□ -0.43
RUNX3-201ENST00000308873 S1PR3Q99500 378 aa12.37□□□□□ -0.43
RUNX3-201ENST00000308873 IGKV3D-15A0A087WSY6 115 aa12.36□□□□□ -0.43
RUNX3-201ENST00000308873 COX5BP10606 129 aa12.36□□□□□ -0.43
RUNX3-201ENST00000308873 PRR27Q6MZM9 219 aa12.36□□□□□ -0.43
RUNX3-201ENST00000308873 Q6ZR03 302 aa12.36□□□□□ -0.43
RUNX3-201ENST00000308873 SEPSECSQ9HD40 501 aaKnown RBP12.36□□□□□ -0.43
RUNX3-201ENST00000308873 TIMM9Q9Y5J7 89 aa12.36□□□□□ -0.43
RUNX3-201ENST00000308873 MKRN2OSH3BPM6 223 aa12.36□□□□□ -0.43
RUNX3-201ENST00000308873 CDKN1AP38936 164 aa12.36□□□□□ -0.43
RUNX3-201ENST00000308873 SP5Q6BEB4 398 aaPredicted RBP12.36□□□□□ -0.43
RUNX3-201ENST00000308873 TXN2Q99757 166 aa12.36□□□□□ -0.43
RUNX3-201ENST00000308873 C15orf62A8K5M9 175 aa12.36□□□□□ -0.43
RUNX3-201ENST00000308873 NTN3O00634 580 aaPredicted RBP12.36□□□□□ -0.43
RUNX3-201ENST00000308873 GGCTO75223 188 aaKnown RBP12.36□□□□□ -0.43
RUNX3-201ENST00000308873 CGAP01215 116 aa12.36□□□□□ -0.43
RUNX3-201ENST00000308873 CD46P15529 392 aa12.36□□□□□ -0.43
RUNX3-201ENST00000308873 DHRS13Q6UX07 377 aa12.36□□□□□ -0.43
RUNX3-201ENST00000308873 OR5AU1Q8NGC0 362 aa12.36□□□□□ -0.43
RUNX3-201ENST00000308873 COQ2Q96H96 371 aa12.36□□□□□ -0.43
RUNX3-201ENST00000308873 AGMATQ9BSE5 352 aa12.36□□□□□ -0.43
RUNX3-201ENST00000308873 FOXF2Q12947 444 aa12.35□□□□□ -0.43
RUNX3-201ENST00000308873 TRBV20OR9-2A0A075B6H5 130 aa12.35□□□□□ -0.43
RUNX3-201ENST00000308873 RNASEH2CQ8TDP1 164 aaKnown RBP12.35□□□□□ -0.43
RUNX3-201ENST00000308873 BCL2L2Q92843 193 aaPredicted RBP12.35□□□□□ -0.43
RUNX3-201ENST00000308873 IRF2P14316 349 aa12.35□□□□□ -0.43
RUNX3-201ENST00000308873 CRYBB3P26998 211 aa12.35□□□□□ -0.43
RUNX3-201ENST00000308873 TIMP3P35625 211 aa12.35□□□□□ -0.43
RUNX3-201ENST00000308873 SGK494Q96LW2 274 aa12.35□□□□□ -0.43
RUNX3-201ENST00000308873 ARRDC1-AS1Q9H2J1 176 aa12.35□□□□□ -0.43
RUNX3-201ENST00000308873 RAB29O14966 203 aa12.34□□□□□ -0.43
RUNX3-201ENST00000308873 CYC1P08574 325 aa12.34□□□□□ -0.43
RUNX3-201ENST00000308873 RPP30P78346 268 aaKnown RBP12.34□□□□□ -0.43
RUNX3-201ENST00000308873 RAB31Q13636 194 aa12.34□□□□□ -0.43
RUNX3-201ENST00000308873 TREML4Q6UXN2 200 aa12.34□□□□□ -0.43
RUNX3-201ENST00000308873 LYG1Q8N1E2 194 aa12.34□□□□□ -0.43
RUNX3-201ENST00000308873 FAM19A2Q8N3H0 131 aa12.34□□□□□ -0.43
RUNX3-201ENST00000308873 RNASE7Q9H1E1 156 aaKnown RBP12.34□□□□□ -0.43
RUNX3-201ENST00000308873 CA1P00915 261 aaPredicted RBP12.34□□□□□ -0.43
RUNX3-201ENST00000308873 SP1P08047 785 aa12.34□□□□□ -0.43
RUNX3-201ENST00000308873 CCL11P51671 97 aa12.34□□□□□ -0.43
RUNX3-201ENST00000308873 SOX8P57073 446 aa12.34□□□□□ -0.43
RUNX3-201ENST00000308873 ZCCHC14Q8WYQ9 949 aaKnown RBP12.34□□□□□ -0.43
RUNX3-201ENST00000308873 PYGO2Q9BRQ0 406 aa12.34□□□□□ -0.43
RUNX3-201ENST00000308873 ELOVL5Q9NYP7 299 aa12.34□□□□□ -0.43
RUNX3-201ENST00000308873 TRBV6-6A0A0A6YYG2 114 aa12.34□□□□□ -0.43
RUNX3-201ENST00000308873 VENTXO95231 258 aa12.34□□□□□ -0.43
RUNX3-201ENST00000308873 NRN1LQ496H8 165 aa12.34□□□□□ -0.43
RUNX3-201ENST00000308873 PQLC2Q6ZP29 291 aa12.34□□□□□ -0.43
RUNX3-201ENST00000308873 WNT10AQ9GZT5 417 aa12.34□□□□□ -0.43
RUNX3-201ENST00000308873 YTHDF2Q9Y5A9 579 aaKnown RBP12.34□□□□□ -0.43
RUNX3-201ENST00000308873 DCHS1Q96JQ0 3298 aa12.33□□□□□ -0.44
RUNX3-201ENST00000308873 SPRY3O43610 288 aa12.33□□□□□ -0.44
RUNX3-201ENST00000308873 ZNF253O75346 499 aa12.33□□□□□ -0.44
RUNX3-201ENST00000308873 TNFSF10P50591 281 aa12.33□□□□□ -0.44
RUNX3-201ENST00000308873 KRTCAP3Q53RY4 240 aa12.33□□□□□ -0.44
RUNX3-201ENST00000308873 MOB3BQ86TA1 216 aa12.33□□□□□ -0.44
RUNX3-201ENST00000308873 SSBP3Q9BWW4 388 aaPredicted RBP12.33□□□□□ -0.44
RUNX3-201ENST00000308873 BRWD1-AS2P59051 145 aa12.33□□□□□ -0.44
RUNX3-201ENST00000308873 SUMO1P63165 101 aaKnown RBP12.33□□□□□ -0.44
RUNX3-201ENST00000308873 SMIM21Q3B7S5 101 aa12.33□□□□□ -0.44
RUNX3-201ENST00000308873 MBNL3Q9NUK0 354 aaKnown RBP12.33□□□□□ -0.44
RUNX3-201ENST00000308873 C9orf172C9J069 976 aa12.33□□□□□ -0.44
RUNX3-201ENST00000308873 MLNRO43193 412 aa12.33□□□□□ -0.44
RUNX3-201ENST00000308873 GNG4P50150 75 aa12.33□□□□□ -0.44
RUNX3-201ENST00000308873 LBHQ53QV2 105 aaPredicted RBP12.33□□□□□ -0.44
RUNX3-201ENST00000308873 KCNIP2Q9NS61 270 aa12.33□□□□□ -0.44
RUNX3-201ENST00000308873 TMEM106BQ9NUM4 274 aa12.33□□□□□ -0.44
RUNX3-201ENST00000308873 TMEM140Q9NV12 185 aa12.33□□□□□ -0.44
RUNX3-201ENST00000308873 WDR83OSQ9Y284 106 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms