RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 SF3B5Q9BWJ5 86 aaKnown RBP12.22□□□□□ -0.45
PTPN9-201ENST00000306726 HIPK2Q9H2X6 1198 aa12.22□□□□□ -0.45
PTPN9-201ENST00000306726 S100A7P31151 101 aa12.22□□□□□ -0.45
PTPN9-201ENST00000306726 SOX8P57073 446 aa12.22□□□□□ -0.45
PTPN9-201ENST00000306726 JOSD1Q15040 202 aaPredicted RBP12.22□□□□□ -0.45
PTPN9-201ENST00000306726 OR10G8Q8NGN5 311 aa12.22□□□□□ -0.45
PTPN9-201ENST00000306726 OR1L6Q8NGR2 347 aa12.22□□□□□ -0.45
PTPN9-201ENST00000306726 SNHG12Q9BXW3 62 aa12.22□□□□□ -0.45
PTPN9-201ENST00000306726 NPCDR1Q9BY65 106 aa12.22□□□□□ -0.45
PTPN9-201ENST00000306726 TTTY12Q9BZ98 90 aa12.22□□□□□ -0.45
PTPN9-201ENST00000306726 CLDN14O95500 239 aa12.22□□□□□ -0.45
PTPN9-201ENST00000306726 CD1BP29016 333 aa12.22□□□□□ -0.45
PTPN9-201ENST00000306726 ADMP35318 185 aa12.22□□□□□ -0.45
PTPN9-201ENST00000306726 SUMO1P63165 101 aaKnown RBP12.22□□□□□ -0.45
PTPN9-201ENST00000306726 ETFRF1Q6IPR1 90 aa12.22□□□□□ -0.45
PTPN9-201ENST00000306726 SCNM1Q9BWG6 230 aa12.22□□□□□ -0.45
PTPN9-201ENST00000306726 RNASE7Q9H1E1 156 aaKnown RBP12.22□□□□□ -0.45
PTPN9-201ENST00000306726 LAMA5O15230 3695 aa12.22□□□□□ -0.45
PTPN9-201ENST00000306726 TMEM8BA6NDV4 472 aa12.21□□□□□ -0.45
PTPN9-201ENST00000306726 MARCH11A6NNE9 402 aa12.21□□□□□ -0.45
PTPN9-201ENST00000306726 MPV17P39210 176 aa12.21□□□□□ -0.45
PTPN9-201ENST00000306726 HINT1P49773 126 aaPredicted RBP12.21□□□□□ -0.45
PTPN9-201ENST00000306726 MLANAQ16655 118 aa12.21□□□□□ -0.45
PTPN9-201ENST00000306726 LRRC29Q8WV35 223 aa12.21□□□□□ -0.45
PTPN9-201ENST00000306726 B4DEV8 164 aa12.21□□□□□ -0.45
PTPN9-201ENST00000306726 ZNF253O75346 499 aa12.21□□□□□ -0.45
PTPN9-201ENST00000306726 FOXH1O75593 365 aa12.21□□□□□ -0.45
PTPN9-201ENST00000306726 SERF1AO75920 110 aa12.21□□□□□ -0.45
PTPN9-201ENST00000306726 CDKN1AP38936 164 aa12.21□□□□□ -0.45
PTPN9-201ENST00000306726 OR13A1Q8NGR1 328 aa12.21□□□□□ -0.45
PTPN9-201ENST00000306726 MCRIP2Q9BUT9 160 aaKnown RBP12.21□□□□□ -0.45
PTPN9-201ENST00000306726 WISP2O76076 250 aa12.21□□□□□ -0.46
PTPN9-201ENST00000306726 LMO1P25800 156 aa12.21□□□□□ -0.46
PTPN9-201ENST00000306726 CRYBB3P26998 211 aa12.21□□□□□ -0.46
PTPN9-201ENST00000306726 BLNKQ8WV28 456 aa12.21□□□□□ -0.46
PTPN9-201ENST00000306726 KALRNO60229 2985 aa12.21□□□□□ -0.46
PTPN9-201ENST00000306726 CA11O75493 328 aa12.2□□□□□ -0.46
PTPN9-201ENST00000306726 CD46P15529 392 aa12.2□□□□□ -0.46
PTPN9-201ENST00000306726 ZNF83P51522 516 aa12.2□□□□□ -0.46
PTPN9-201ENST00000306726 CYP2G1PQ6ZSU1 146 aa12.2□□□□□ -0.46
PTPN9-201ENST00000306726 C1QTNF5Q9BXJ0 243 aa12.2□□□□□ -0.46
PTPN9-201ENST00000306726 DOPEY2Q9Y3R5 2298 aa12.2□□□□□ -0.46
PTPN9-201ENST00000306726 A0A087WWC5 75 aa12.2□□□□□ -0.46
PTPN9-201ENST00000306726 TMEM30CPA0ZSE6 113 aa12.2□□□□□ -0.46
PTPN9-201ENST00000306726 HPRT1P00492 218 aa12.2□□□□□ -0.46
PTPN9-201ENST00000306726 GNB1P62873 340 aa12.2□□□□□ -0.46
PTPN9-201ENST00000306726 RPL31P62899 125 aaKnown RBP12.2□□□□□ -0.46
PTPN9-201ENST00000306726 TLN1Q9Y490 2541 aaKnown RBP12.2□□□□□ -0.46
PTPN9-201ENST00000306726 RNF212BA8MTL3 300 aa12.2□□□□□ -0.46
PTPN9-201ENST00000306726 A8MXE2 369 aa12.2□□□□□ -0.46
PTPN9-201ENST00000306726 J3QT63 122 aa12.2□□□□□ -0.46
PTPN9-201ENST00000306726 CGAP01215 116 aa12.2□□□□□ -0.46
PTPN9-201ENST00000306726 OR5G3P0C626 314 aa12.2□□□□□ -0.46
PTPN9-201ENST00000306726 ARR3P36575 388 aa12.2□□□□□ -0.46
PTPN9-201ENST00000306726 GPR6P46095 362 aaPredicted RBP12.2□□□□□ -0.46
PTPN9-201ENST00000306726 SERF2P84101 59 aa12.2□□□□□ -0.46
PTPN9-201ENST00000306726 TRAT1Q6PIZ9 186 aa12.2□□□□□ -0.46
PTPN9-201ENST00000306726 OCC1Q8TAD7 63 aa12.2□□□□□ -0.46
PTPN9-201ENST00000306726 CTDSP1Q9GZU7 261 aa12.2□□□□□ -0.46
PTPN9-201ENST00000306726 POLDIP2Q9Y2S7 368 aa12.2□□□□□ -0.46
PTPN9-201ENST00000306726 PXMP4Q9Y6I8 212 aa12.2□□□□□ -0.46
PTPN9-201ENST00000306726 ADGRG4Q8IZF6 3080 aa12.2□□□□□ -0.46
PTPN9-201ENST00000306726 LINC00473A8K010 186 aa12.19□□□□□ -0.46
PTPN9-201ENST00000306726 CSN3P07498 182 aa12.19□□□□□ -0.46
PTPN9-201ENST00000306726 HLA-DRB5Q30154 266 aa12.19□□□□□ -0.46
PTPN9-201ENST00000306726 PQLC2Q6ZP29 291 aa12.19□□□□□ -0.46
PTPN9-201ENST00000306726 ZCCHC24Q8N2G6 241 aaKnown RBP12.19□□□□□ -0.46
PTPN9-201ENST00000306726 LRRC30A6NM36 301 aa12.19□□□□□ -0.46
PTPN9-201ENST00000306726 A8MWP6 167 aa12.19□□□□□ -0.46
PTPN9-201ENST00000306726 IRF2P14316 349 aa12.19□□□□□ -0.46
PTPN9-201ENST00000306726 TNFSF10P50591 281 aa12.19□□□□□ -0.46
PTPN9-201ENST00000306726 B3GALT5-AS1P59052 145 aa12.19□□□□□ -0.46
PTPN9-201ENST00000306726 Q56UQ5 140 aa12.19□□□□□ -0.46
PTPN9-201ENST00000306726 LCN12Q6JVE5 192 aa12.19□□□□□ -0.46
PTPN9-201ENST00000306726 Q6ZN92 141 aa12.19□□□□□ -0.46
PTPN9-201ENST00000306726 NANOS1Q8WY41 292 aaKnown RBP12.19□□□□□ -0.46
PTPN9-201ENST00000306726 NDUFAF3Q9BU61 184 aa12.19□□□□□ -0.46
PTPN9-201ENST00000306726 MRPL18Q9H0U6 180 aaKnown RBP12.19□□□□□ -0.46
PTPN9-201ENST00000306726 RBFOX2O43251 390 aaKnown RBP eCLIP12.19□□□□□ -0.46
PTPN9-201ENST00000306726 CD24P25063 80 aa12.19□□□□□ -0.46
PTPN9-201ENST00000306726 ZNF137PP52743 207 aa12.19□□□□□ -0.46
PTPN9-201ENST00000306726 KIR3DL3Q8N743 410 aa12.19□□□□□ -0.46
PTPN9-201ENST00000306726 ENSAO43768 121 aaKnown RBP12.18□□□□□ -0.46
PTPN9-201ENST00000306726 NPSP0C0P6 89 aa12.18□□□□□ -0.46
PTPN9-201ENST00000306726 DCAF10Q5QP82 559 aa12.18□□□□□ -0.46
PTPN9-201ENST00000306726 S1PR3Q99500 378 aa12.18□□□□□ -0.46
PTPN9-201ENST00000306726 ASCL2Q99929 193 aa12.18□□□□□ -0.46
PTPN9-201ENST00000306726 RIMS4Q9H426 269 aaPredicted RBP12.18□□□□□ -0.46
PTPN9-201ENST00000306726 OR6C3Q9NZP0 311 aa12.18□□□□□ -0.46
PTPN9-201ENST00000306726 TACC2O95359 2948 aa12.18□□□□□ -0.46
PTPN9-201ENST00000306726 IGLV3-1P01715 115 aa12.18□□□□□ -0.46
PTPN9-201ENST00000306726 OR9G9P0C7N8 305 aa12.18□□□□□ -0.46
PTPN9-201ENST00000306726 LHX2P50458 406 aa12.18□□□□□ -0.46
PTPN9-201ENST00000306726 TMEM42Q69YG0 159 aa12.18□□□□□ -0.46
PTPN9-201ENST00000306726 POM121L2Q96KW2 1035 aa12.18□□□□□ -0.46
PTPN9-201ENST00000306726 PFN1P07737 140 aaKnown RBP12.18□□□□□ -0.46
PTPN9-201ENST00000306726 NPPCP23582 126 aa12.18□□□□□ -0.46
PTPN9-201ENST00000306726 PSG7Q13046 419 aa12.18□□□□□ -0.46
PTPN9-201ENST00000306726 MMDQ15546 238 aa12.18□□□□□ -0.46
PTPN9-201ENST00000306726 RNASEKQ6P5S7 137 aaKnown RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms