RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 CFHR1Q03591 330 aa13.52□□□□□ -0.25
USP42-201ENST00000306177 MRPL32Q9BYC8 188 aaKnown RBP13.52□□□□□ -0.25
USP42-201ENST00000306177 CHODLQ9H9P2 273 aa13.52□□□□□ -0.25
USP42-201ENST00000306177 NPIPB11E5RHQ5 1161 aa13.51□□□□□ -0.25
USP42-201ENST00000306177 FOXH1O75593 365 aa13.51□□□□□ -0.25
USP42-201ENST00000306177 ZFP36L1Q07352 338 aaKnown RBP13.51□□□□□ -0.25
USP42-201ENST00000306177 TM4SF5O14894 197 aa13.51□□□□□ -0.25
USP42-201ENST00000306177 HLA-DQA1P01909 254 aa13.51□□□□□ -0.25
USP42-201ENST00000306177 TRGC2P03986 189 aa13.51□□□□□ -0.25
USP42-201ENST00000306177 GALNT14Q96FL9 552 aa13.51□□□□□ -0.25
USP42-201ENST00000306177 NABP2Q9BQ15 211 aa13.51□□□□□ -0.25
USP42-201ENST00000306177 PLSCR2Q9NRY7 297 aa13.51□□□□□ -0.25
USP42-201ENST00000306177 DIRC3C9JPN6 131 aa13.51□□□□□ -0.25
USP42-201ENST00000306177 ABHD17AQ96GS6 310 aa13.51□□□□□ -0.25
USP42-201ENST00000306177 KLF7O75840 302 aaPredicted RBP13.51□□□□□ -0.25
USP42-201ENST00000306177 LYPD3O95274 346 aa13.51□□□□□ -0.25
USP42-201ENST00000306177 LHX2P50458 406 aa13.51□□□□□ -0.25
USP42-201ENST00000306177 PSG7Q13046 419 aa13.51□□□□□ -0.25
USP42-201ENST00000306177 FXYD3Q14802 87 aa13.51□□□□□ -0.25
USP42-201ENST00000306177 LOC389332A0A1B0GUA5 103 aa13.5□□□□□ -0.25
USP42-201ENST00000306177 SIGLEC5O15389 551 aa13.5□□□□□ -0.25
USP42-201ENST00000306177 LINC00271P0C7V0 271 aa13.5□□□□□ -0.25
USP42-201ENST00000306177 DOCK4Q8N1I0 1966 aa13.5□□□□□ -0.25
USP42-201ENST00000306177 M0QZK8 103 aa13.5□□□□□ -0.25
USP42-201ENST00000306177 GGCTO75223 188 aaKnown RBP13.5□□□□□ -0.25
USP42-201ENST00000306177 ATP5G2Q06055 141 aa13.5□□□□□ -0.25
USP42-201ENST00000306177 FAM106AQ4KMX7 169 aa13.5□□□□□ -0.25
USP42-201ENST00000306177 PKIAP61925 76 aa13.5□□□□□ -0.25
USP42-201ENST00000306177 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.5□□□□□ -0.25
USP42-201ENST00000306177 NPIPB3Q92617 1050 aa13.5□□□□□ -0.25
USP42-201ENST00000306177 OSR1Q8TAX0 266 aaPredicted RBP13.5□□□□□ -0.25
USP42-201ENST00000306177 PAM16Q9Y3D7 125 aa13.5□□□□□ -0.25
USP42-201ENST00000306177 CXorf65A6NEN9 183 aa13.49□□□□□ -0.25
USP42-201ENST00000306177 IQCF6A8MYZ5 107 aa13.49□□□□□ -0.25
USP42-201ENST00000306177 RNF224P0DH78 156 aa13.49□□□□□ -0.25
USP42-201ENST00000306177 UCP1P25874 307 aa13.49□□□□□ -0.25
USP42-201ENST00000306177 RAB9AP51151 201 aa13.49□□□□□ -0.25
USP42-201ENST00000306177 DLX1P56177 255 aa13.49□□□□□ -0.25
USP42-201ENST00000306177 ZP1P60852 638 aa13.49□□□□□ -0.25
USP42-201ENST00000306177 RTN4RQ9BZR6 473 aa13.49□□□□□ -0.25
USP42-201ENST00000306177 THSD7BQ9C0I4 1608 aa13.49□□□□□ -0.25
USP42-201ENST00000306177 ZNF646O15015 1829 aaPredicted RBP13.49□□□□□ -0.25
USP42-201ENST00000306177 IFITM10A6NMD0 228 aa13.49□□□□□ -0.25
USP42-201ENST00000306177 GATAD1Q8WUU5 269 aa13.49□□□□□ -0.25
USP42-201ENST00000306177 CCL19Q99731 98 aa13.49□□□□□ -0.25
USP42-201ENST00000306177 SIP14410 1827 aa13.49□□□□□ -0.25
USP42-201ENST00000306177 CRYBB3P26998 211 aa13.49□□□□□ -0.25
USP42-201ENST00000306177 PSMB2P49721 201 aa13.49□□□□□ -0.25
USP42-201ENST00000306177 ZNF841Q6ZN19 808 aa13.49□□□□□ -0.25
USP42-201ENST00000306177 MESP1Q9BRJ9 268 aa13.49□□□□□ -0.25
USP42-201ENST00000306177 ZFP30Q9Y2G7 519 aa13.49□□□□□ -0.25
USP42-201ENST00000306177 SBF1O95248 1867 aa13.49□□□□□ -0.25
USP42-201ENST00000306177 CD99P14209 185 aa13.49□□□□□ -0.25
USP42-201ENST00000306177 BSPH1Q075Z2 132 aa13.49□□□□□ -0.25
USP42-201ENST00000306177 SRSF9Q13242 221 aaKnown RBP eCLIP13.49□□□□□ -0.25
USP42-201ENST00000306177 FAM90A1Q86YD7 464 aa13.49□□□□□ -0.25
USP42-201ENST00000306177 CA2P00918 260 aa13.48□□□□□ -0.25
USP42-201ENST00000306177 AREGP15514 252 aa13.48□□□□□ -0.25
USP42-201ENST00000306177 FHITP49789 147 aa13.48□□□□□ -0.25
USP42-201ENST00000306177 RPS20P60866 119 aaKnown RBP13.48□□□□□ -0.25
USP42-201ENST00000306177 LY6EQ16553 131 aa13.48□□□□□ -0.25
USP42-201ENST00000306177 TMEM177Q53S58 311 aa13.48□□□□□ -0.25
USP42-201ENST00000306177 PET117Q6UWS5 81 aa13.48□□□□□ -0.25
USP42-201ENST00000306177 C9orf106Q8NAJ2 232 aa13.48□□□□□ -0.25
USP42-201ENST00000306177 SYT8Q8NBV8 401 aa13.48□□□□□ -0.25
USP42-201ENST00000306177 OR13A1Q8NGR1 328 aa13.48□□□□□ -0.25
USP42-201ENST00000306177 TBX15Q96SF7 602 aa13.48□□□□□ -0.25
USP42-201ENST00000306177 PQLC2LA1A4F0 135 aa13.48□□□□□ -0.25
USP42-201ENST00000306177 NPIPB7O75200 414 aa13.48□□□□□ -0.25
USP42-201ENST00000306177 ACAA1P09110 424 aaPredicted RBP13.48□□□□□ -0.25
USP42-201ENST00000306177 C2orf68Q2NKX9 166 aa13.48□□□□□ -0.25
USP42-201ENST00000306177 LBHQ53QV2 105 aaPredicted RBP13.48□□□□□ -0.25
USP42-201ENST00000306177 RTBDNQ9BSG5 229 aaPredicted RBP13.48□□□□□ -0.25
USP42-201ENST00000306177 CGB1A6NKQ9 187 aa13.48□□□□□ -0.25
USP42-201ENST00000306177 AGAP20933 346 aa13.48□□□□□ -0.25
USP42-201ENST00000306177 SMAGPQ0VAQ4 97 aa13.48□□□□□ -0.25
USP42-201ENST00000306177 ZNF362Q5T0B9 420 aaPredicted RBP13.48□□□□□ -0.25
USP42-201ENST00000306177 ACACAQ13085 2346 aa13.48□□□□□ -0.25
USP42-201ENST00000306177 A6NDN8 102 aa13.48□□□□□ -0.25
USP42-201ENST00000306177 NTN3O00634 580 aaPredicted RBP13.48□□□□□ -0.25
USP42-201ENST00000306177 EIF3GO75821 320 aaKnown RBP eCLIP13.48□□□□□ -0.25
USP42-201ENST00000306177 CKS2P33552 79 aa13.48□□□□□ -0.25
USP42-201ENST00000306177 FAM216BQ8N7L0 139 aa13.47□□□□□ -0.25
USP42-201ENST00000306177 EEF1AKMT3Q96AZ1 226 aa13.47□□□□□ -0.25
USP42-201ENST00000306177 PARLQ9H300 379 aa13.47□□□□□ -0.25
USP42-201ENST00000306177 KBTBD11-OT1A0A1B0GTJ5 212 aa13.47□□□□□ -0.25
USP42-201ENST00000306177 AMY1AP04745 511 aa13.47□□□□□ -0.25
USP42-201ENST00000306177 RELQ04864 619 aaPredicted RBP13.47□□□□□ -0.25
USP42-201ENST00000306177 LAMTOR1Q6IAA8 161 aa13.47□□□□□ -0.25
USP42-201ENST00000306177 GCHFRP30047 84 aa13.47□□□□□ -0.25
USP42-201ENST00000306177 FAM201AQ5SY85 155 aa13.47□□□□□ -0.25
USP42-201ENST00000306177 NEU4Q8WWR8 484 aaPredicted RBP13.47□□□□□ -0.25
USP42-201ENST00000306177 TGIF2-C20orf24A0A0A6YYL0 155 aa13.46□□□□□ -0.25
USP42-201ENST00000306177 CELA3BP08861 270 aa13.46□□□□□ -0.25
USP42-201ENST00000306177 RELBQ01201 579 aa13.46□□□□□ -0.25
USP42-201ENST00000306177 HSPB9Q9BQS6 159 aa13.46□□□□□ -0.25
USP42-201ENST00000306177 GGACTQ9BVM4 153 aa13.46□□□□□ -0.25
USP42-201ENST00000306177 MRPL18Q9H0U6 180 aaKnown RBP13.46□□□□□ -0.25
USP42-201ENST00000306177 AUP1Q9Y679 476 aa13.46□□□□□ -0.25
USP42-201ENST00000306177 C5orf52A6NGY3 159 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms