RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 MFAP2P55001 183 aa10.98□□□□□ -0.65
TRIM35-201ENST00000305364 ZNF585BQ52M93 769 aa10.98□□□□□ -0.65
TRIM35-201ENST00000305364 PPP1R35Q8TAP8 253 aa10.98□□□□□ -0.65
TRIM35-201ENST00000305364 GNB4Q9HAV0 340 aa10.98□□□□□ -0.65
TRIM35-201ENST00000305364 SLC45A2Q9UMX9 530 aa10.98□□□□□ -0.65
TRIM35-201ENST00000305364 GDF9O60383 454 aa10.98□□□□□ -0.65
TRIM35-201ENST00000305364 C1orf210Q8IVY1 113 aa10.98□□□□□ -0.65
TRIM35-201ENST00000305364 CORO2AQ92828 525 aa10.98□□□□□ -0.65
TRIM35-201ENST00000305364 FER1L5A0AVI2 2057 aa10.97□□□□□ -0.65
TRIM35-201ENST00000305364 COX19Q49B96 90 aa10.97□□□□□ -0.65
TRIM35-201ENST00000305364 KRTCAP3Q53RY4 240 aa10.97□□□□□ -0.65
TRIM35-201ENST00000305364 SAPCD1Q5SSQ6 148 aa10.97□□□□□ -0.65
TRIM35-201ENST00000305364 Q6ZS49 121 aa10.97□□□□□ -0.65
TRIM35-201ENST00000305364 HSPB7Q9UBY9 170 aa10.97□□□□□ -0.65
TRIM35-201ENST00000305364 TMEM131Q92545 1883 aa10.97□□□□□ -0.65
TRIM35-201ENST00000305364 RAB29O14966 203 aa10.97□□□□□ -0.65
TRIM35-201ENST00000305364 TOX3O15405 576 aaPredicted RBP10.97□□□□□ -0.65
TRIM35-201ENST00000305364 RBFOX2O43251 390 aaKnown RBP eCLIP10.97□□□□□ -0.65
TRIM35-201ENST00000305364 MPDU1O75352 247 aa10.97□□□□□ -0.65
TRIM35-201ENST00000305364 OR10J4P0C629 311 aa10.97□□□□□ -0.65
TRIM35-201ENST00000305364 RFPL3SP0C7P2 107 aa10.97□□□□□ -0.65
TRIM35-201ENST00000305364 GCHFRP30047 84 aa10.97□□□□□ -0.65
TRIM35-201ENST00000305364 S100A7P31151 101 aa10.97□□□□□ -0.65
TRIM35-201ENST00000305364 PCOLCEQ15113 449 aa10.97□□□□□ -0.65
TRIM35-201ENST00000305364 TEPPQ6URK8 271 aa10.97□□□□□ -0.65
TRIM35-201ENST00000305364 NHLRC2Q8NBF2 726 aa10.97□□□□□ -0.65
TRIM35-201ENST00000305364 OR5P3Q8WZ94 311 aa10.97□□□□□ -0.65
TRIM35-201ENST00000305364 DAZAP1Q96EP5 407 aaKnown RBP10.97□□□□□ -0.65
TRIM35-201ENST00000305364 NPVFQ9HCQ7 196 aa10.97□□□□□ -0.65
TRIM35-201ENST00000305364 OOEPA6NGQ2 149 aa10.97□□□□□ -0.65
TRIM35-201ENST00000305364 KLF3P57682 345 aaPredicted RBP10.97□□□□□ -0.65
TRIM35-201ENST00000305364 IL11RAQ14626 422 aa10.97□□□□□ -0.65
TRIM35-201ENST00000305364 CENPWQ5EE01 88 aa10.97□□□□□ -0.65
TRIM35-201ENST00000305364 IBA57Q5T440 356 aaKnown RBP10.97□□□□□ -0.65
TRIM35-201ENST00000305364 TRAT1Q6PIZ9 186 aa10.97□□□□□ -0.65
TRIM35-201ENST00000305364 Q6ZPA2 131 aa10.97□□□□□ -0.65
TRIM35-201ENST00000305364 FOXL2NBQ6ZUU3 175 aa10.97□□□□□ -0.65
TRIM35-201ENST00000305364 VKORC1L1Q8N0U8 176 aa10.97□□□□□ -0.65
TRIM35-201ENST00000305364 FAM216AQ8WUB2 273 aa10.97□□□□□ -0.65
TRIM35-201ENST00000305364 SH3BGRL2Q9UJC5 107 aa10.97□□□□□ -0.65
TRIM35-201ENST00000305364 NEURL1O76050 574 aa10.96□□□□□ -0.65
TRIM35-201ENST00000305364 TNFSF15O95150 251 aa10.96□□□□□ -0.65
TRIM35-201ENST00000305364 HLA-DQA1P01909 254 aa10.96□□□□□ -0.65
TRIM35-201ENST00000305364 SRSF7Q16629 238 aaKnown RBP eCLIP10.96□□□□□ -0.65
TRIM35-201ENST00000305364 ST6GALNAC6Q969X2 333 aa10.96□□□□□ -0.65
TRIM35-201ENST00000305364 IL19Q9UHD0 177 aa10.96□□□□□ -0.65
TRIM35-201ENST00000305364 UBE2G1P62253 170 aa10.96□□□□□ -0.65
TRIM35-201ENST00000305364 PMCHL1Q16048 86 aa10.96□□□□□ -0.65
TRIM35-201ENST00000305364 OR4A47Q6IF82 309 aa10.96□□□□□ -0.65
TRIM35-201ENST00000305364 C1orf174Q8IYL3 243 aa10.96□□□□□ -0.65
TRIM35-201ENST00000305364 ZPBPQ9BS86 351 aa10.96□□□□□ -0.65
TRIM35-201ENST00000305364 SSBP3Q9BWW4 388 aaPredicted RBP10.96□□□□□ -0.65
TRIM35-201ENST00000305364 MKI67P46013 3256 aaKnown RBP10.96□□□□□ -0.66
TRIM35-201ENST00000305364 SPINK14Q6IE38 97 aa10.96□□□□□ -0.66
TRIM35-201ENST00000305364 RNASE7Q9H1E1 156 aaKnown RBP10.96□□□□□ -0.66
TRIM35-201ENST00000305364 FBXL7Q9UJT9 491 aa10.96□□□□□ -0.66
TRIM35-201ENST00000305364 ROS1P08922 2347 aa10.96□□□□□ -0.66
TRIM35-201ENST00000305364 RPL15P61313 204 aaKnown RBP10.95□□□□□ -0.66
TRIM35-201ENST00000305364 C3AR1Q16581 482 aa10.95□□□□□ -0.66
TRIM35-201ENST00000305364 MRPL52Q86TS9 123 aaKnown RBP10.95□□□□□ -0.66
TRIM35-201ENST00000305364 SCCPDHQ8NBX0 429 aa10.95□□□□□ -0.66
TRIM35-201ENST00000305364 SPSB4Q96A44 273 aa10.95□□□□□ -0.66
TRIM35-201ENST00000305364 TMEM167BQ9NRX6 74 aa10.95□□□□□ -0.66
TRIM35-201ENST00000305364 IGHV1-45A0A0A0MS14 117 aa10.95□□□□□ -0.66
TRIM35-201ENST00000305364 A0A0G2JMM0 328 aa10.95□□□□□ -0.66
TRIM35-201ENST00000305364 A0A1W2PPB8 328 aa10.95□□□□□ -0.66
TRIM35-201ENST00000305364 A0A1W2PRS3 328 aa10.95□□□□□ -0.66
TRIM35-201ENST00000305364 KIR3DP1A8MWS1 328 aa10.95□□□□□ -0.66
TRIM35-201ENST00000305364 CGAP01215 116 aa10.95□□□□□ -0.66
TRIM35-201ENST00000305364 CCL4P13236 92 aa10.95□□□□□ -0.66
TRIM35-201ENST00000305364 TNFSF4P23510 183 aa10.95□□□□□ -0.66
TRIM35-201ENST00000305364 FABP6P51161 128 aa10.95□□□□□ -0.66
TRIM35-201ENST00000305364 C17orf82Q86X59 251 aaPredicted RBP10.95□□□□□ -0.66
TRIM35-201ENST00000305364 KCNS1Q96KK3 526 aa10.95□□□□□ -0.66
TRIM35-201ENST00000305364 DOCK10Q96BY6 2186 aa10.95□□□□□ -0.66
TRIM35-201ENST00000305364 TRBV9A0A0B4J1U6 114 aa10.95□□□□□ -0.66
TRIM35-201ENST00000305364 ZNF716A6NP11 495 aa10.95□□□□□ -0.66
TRIM35-201ENST00000305364 TPTE2P1Q5T6R2 138 aa10.95□□□□□ -0.66
TRIM35-201ENST00000305364 LCN12Q6JVE5 192 aa10.95□□□□□ -0.66
TRIM35-201ENST00000305364 ZNF826PQ6ZT77 177 aa10.95□□□□□ -0.66
TRIM35-201ENST00000305364 MS4A5Q9H3V2 200 aa10.95□□□□□ -0.66
TRIM35-201ENST00000305364 A0A1W2PQM1 296 aa10.94□□□□□ -0.66
TRIM35-201ENST00000305364 F2Z2F3 143 aa10.94□□□□□ -0.66
TRIM35-201ENST00000305364 GPX1P07203 203 aa10.94□□□□□ -0.66
TRIM35-201ENST00000305364 NPY1RP25929 384 aa10.94□□□□□ -0.66
TRIM35-201ENST00000305364 RPL30P62888 115 aaKnown RBP10.94□□□□□ -0.66
TRIM35-201ENST00000305364 TEX43Q6ZNM6 134 aa10.94□□□□□ -0.66
TRIM35-201ENST00000305364 STPG4Q8N801 248 aa10.94□□□□□ -0.66
TRIM35-201ENST00000305364 OR2D3Q8NGH3 330 aa10.94□□□□□ -0.66
TRIM35-201ENST00000305364 WDR83OSQ9Y284 106 aa10.94□□□□□ -0.66
TRIM35-201ENST00000305364 KLF13Q9Y2Y9 288 aaPredicted RBP10.94□□□□□ -0.66
TRIM35-201ENST00000305364 SPTBN1Q01082 2364 aaKnown RBP10.94□□□□□ -0.66
TRIM35-201ENST00000305364 C12orf77C9JDV5 145 aa10.94□□□□□ -0.66
TRIM35-201ENST00000305364 ZNF324O75467 553 aaPredicted RBP10.94□□□□□ -0.66
TRIM35-201ENST00000305364 C19orf35Q6ZS72 473 aa10.94□□□□□ -0.66
TRIM35-201ENST00000305364 PKIBQ9C010 78 aa10.94□□□□□ -0.66
TRIM35-201ENST00000305364 GAL3ST2Q9H3Q3 398 aa10.94□□□□□ -0.66
TRIM35-201ENST00000305364 TECRQ9NZ01 308 aaKnown RBP10.94□□□□□ -0.66
TRIM35-201ENST00000305364 IGLV3-19P01714 112 aa10.94□□□□□ -0.66
TRIM35-201ENST00000305364 NPPCP23582 126 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms