RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 FOXH1O75593 365 aa8.9□□□□□ -0.98
CLIP1-201ENST00000302528 TMPRSS3P57727 454 aa8.9□□□□□ -0.98
CLIP1-201ENST00000302528 HMGCLL1Q8TB92 370 aa8.9□□□□□ -0.98
CLIP1-201ENST00000302528 EDA2RQ9HAV5 297 aa8.9□□□□□ -0.98
CLIP1-201ENST00000302528 ADAMTSL1Q8N6G6 1762 aa8.9□□□□□ -0.98
CLIP1-201ENST00000302528 NUP205Q92621 2012 aa8.9□□□□□ -0.98
CLIP1-201ENST00000302528 PRR33A8MZF0 331 aa8.9□□□□□ -0.99
CLIP1-201ENST00000302528 ZNHIT1O43257 154 aa8.9□□□□□ -0.99
CLIP1-201ENST00000302528 IL9P15248 144 aa8.9□□□□□ -0.99
CLIP1-201ENST00000302528 GPR183P32249 361 aa8.9□□□□□ -0.99
CLIP1-201ENST00000302528 SELENOHQ8IZQ5 122 aaKnown RBP8.9□□□□□ -0.99
CLIP1-201ENST00000302528 TCF19Q9Y242 345 aa8.9□□□□□ -0.99
CLIP1-201ENST00000302528 AHRRA9YTQ3 701 aa8.9□□□□□ -0.99
CLIP1-201ENST00000302528 GGTLC3B5MD39 225 aa8.9□□□□□ -0.99
CLIP1-201ENST00000302528 CXCL2P19875 107 aa8.9□□□□□ -0.99
CLIP1-201ENST00000302528 ST6GALNAC6Q969X2 333 aa8.9□□□□□ -0.99
CLIP1-201ENST00000302528 MUC21A0A0G2JKD1 596 aa8.89□□□□□ -0.99
CLIP1-201ENST00000302528 MUC21A0A140T8X8 626 aa8.89□□□□□ -0.99
CLIP1-201ENST00000302528 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.89□□□□□ -0.99
CLIP1-201ENST00000302528 CBLN1P23435 193 aa8.89□□□□□ -0.99
CLIP1-201ENST00000302528 RND3P61587 244 aa8.89□□□□□ -0.99
CLIP1-201ENST00000302528 MUC21Q5SSG8 566 aa8.89□□□□□ -0.99
CLIP1-201ENST00000302528 OR4X2Q8NGF9 303 aa8.89□□□□□ -0.99
CLIP1-201ENST00000302528 JPT1Q9UK76 154 aa8.89□□□□□ -0.99
CLIP1-201ENST00000302528 A0A0J9YW62 118 aa8.89□□□□□ -0.99
CLIP1-201ENST00000302528 GCHFRP30047 84 aa8.89□□□□□ -0.99
CLIP1-201ENST00000302528 TMEM249Q2WGJ8 235 aa8.89□□□□□ -0.99
CLIP1-201ENST00000302528 C9orf40Q8IXQ3 194 aa8.89□□□□□ -0.99
CLIP1-201ENST00000302528 OR4D11Q8NGI4 311 aa8.89□□□□□ -0.99
CLIP1-201ENST00000302528 SDF2L1Q9HCN8 221 aa8.89□□□□□ -0.99
CLIP1-201ENST00000302528 PROB1E7EW31 1015 aa8.89□□□□□ -0.99
CLIP1-201ENST00000302528 RNASE4P34096 147 aaKnown RBP8.89□□□□□ -0.99
CLIP1-201ENST00000302528 ZNF146Q15072 292 aa8.89□□□□□ -0.99
CLIP1-201ENST00000302528 CYB5R2Q6BCY4 276 aa8.89□□□□□ -0.99
CLIP1-201ENST00000302528 HIST1H2BAQ96A08 127 aa8.89□□□□□ -0.99
CLIP1-201ENST00000302528 WBP1LQ9NX94 342 aa8.89□□□□□ -0.99
CLIP1-201ENST00000302528 TRAV8-4A0A0B4J246 113 aa8.89□□□□□ -0.99
CLIP1-201ENST00000302528 A0A1W2PPC1 479 aa8.89□□□□□ -0.99
CLIP1-201ENST00000302528 SIGLEC5O15389 551 aa8.89□□□□□ -0.99
CLIP1-201ENST00000302528 CTSSP25774 331 aa8.89□□□□□ -0.99
CLIP1-201ENST00000302528 SIGLEC14Q08ET2 396 aa8.89□□□□□ -0.99
CLIP1-201ENST00000302528 SFTA2Q6UW10 78 aa8.89□□□□□ -0.99
CLIP1-201ENST00000302528 ZAR1Q86SH2 424 aa8.89□□□□□ -0.99
CLIP1-201ENST00000302528 FAM89BQ8N5H3 189 aa8.89□□□□□ -0.99
CLIP1-201ENST00000302528 DMRTA1Q5VZB9 504 aa8.88□□□□□ -0.99
CLIP1-201ENST00000302528 C1orf162Q8NEQ5 155 aaPredicted RBP8.88□□□□□ -0.99
CLIP1-201ENST00000302528 OR11H4Q8NGC9 324 aa8.88□□□□□ -0.99
CLIP1-201ENST00000302528 COX14Q96I36 57 aa8.88□□□□□ -0.99
CLIP1-201ENST00000302528 DMRT1Q9Y5R6 373 aa8.88□□□□□ -0.99
CLIP1-201ENST00000302528 A0A1W2PRX2 142 aa8.88□□□□□ -0.99
CLIP1-201ENST00000302528 DRD3P35462 400 aa8.88□□□□□ -0.99
CLIP1-201ENST00000302528 FHL5Q5TD97 284 aa8.88□□□□□ -0.99
CLIP1-201ENST00000302528 GATAD1Q8WUU5 269 aa8.88□□□□□ -0.99
CLIP1-201ENST00000302528 CST9LQ9H4G1 147 aa8.88□□□□□ -0.99
CLIP1-201ENST00000302528 A0A0G2JLM5 398 aa8.88□□□□□ -0.99
CLIP1-201ENST00000302528 ZNF729A6NN14 1252 aaPredicted RBP8.88□□□□□ -0.99
CLIP1-201ENST00000302528 PTP4A3O75365 173 aa8.88□□□□□ -0.99
CLIP1-201ENST00000302528 TFF2Q03403 129 aa8.88□□□□□ -0.99
CLIP1-201ENST00000302528 S100A7L2Q5SY68 101 aa8.88□□□□□ -0.99
CLIP1-201ENST00000302528 TEX45Q8NA69 505 aa8.88□□□□□ -0.99
CLIP1-201ENST00000302528 YAE1D1Q9NRH1 226 aa8.88□□□□□ -0.99
CLIP1-201ENST00000302528 DLL3Q9NYJ7 618 aa8.88□□□□□ -0.99
CLIP1-201ENST00000302528 IGHV1-69-2A0A0G2JMI3 117 aa8.88□□□□□ -0.99
CLIP1-201ENST00000302528 ELF5Q9UKW6 265 aaPredicted RBP8.88□□□□□ -0.99
CLIP1-201ENST00000302528 FAM90A10PA6NDY2 464 aa8.88□□□□□ -0.99
CLIP1-201ENST00000302528 FAM90A18PA6NE21 464 aa8.88□□□□□ -0.99
CLIP1-201ENST00000302528 FAM90A16PA6NEW6 464 aa8.88□□□□□ -0.99
CLIP1-201ENST00000302528 FAM90A20PA6NIJ5 464 aa8.88□□□□□ -0.99
CLIP1-201ENST00000302528 FAM90A8PA6NJQ4 464 aa8.88□□□□□ -0.99
CLIP1-201ENST00000302528 FAM90A7PA6NKC0 464 aa8.88□□□□□ -0.99
CLIP1-201ENST00000302528 FAM90A22PA8MWA6 464 aa8.88□□□□□ -0.99
CLIP1-201ENST00000302528 FAM90A12PA8MX19 464 aa8.88□□□□□ -0.99
CLIP1-201ENST00000302528 FAM90A5PA8MXJ8 464 aa8.88□□□□□ -0.99
CLIP1-201ENST00000302528 FAM90A23PA8MXZ1 464 aa8.88□□□□□ -0.99
CLIP1-201ENST00000302528 FAM90A15PP0C7V4 464 aa8.88□□□□□ -0.99
CLIP1-201ENST00000302528 FAM90A13PP0C7W8 464 aa8.88□□□□□ -0.99
CLIP1-201ENST00000302528 FAM90A14PP0C7W9 464 aa8.88□□□□□ -0.99
CLIP1-201ENST00000302528 FAM90A24PP0C7X0 464 aa8.88□□□□□ -0.99
CLIP1-201ENST00000302528 IFI27P40305 119 aaPredicted RBP8.88□□□□□ -0.99
CLIP1-201ENST00000302528 P2RY4P51582 365 aa8.88□□□□□ -0.99
CLIP1-201ENST00000302528 TMEM91Q6ZNR0 172 aa8.88□□□□□ -0.99
CLIP1-201ENST00000302528 CYP2G1PQ6ZSU1 146 aa8.88□□□□□ -0.99
CLIP1-201ENST00000302528 RNF182Q8N6D2 247 aa8.88□□□□□ -0.99
CLIP1-201ENST00000302528 ARID1AO14497 2285 aa8.87□□□□□ -0.99
CLIP1-201ENST00000302528 ICE1Q9Y2F5 2266 aa8.87□□□□□ -0.99
CLIP1-201ENST00000302528 PATE3B3GLJ2 98 aa8.87□□□□□ -0.99
CLIP1-201ENST00000302528 GPR132Q9UNW8 380 aa8.87□□□□□ -0.99
CLIP1-201ENST00000302528 KLHDC2Q9Y2U9 406 aa8.87□□□□□ -0.99
CLIP1-201ENST00000302528 PEX11BO96011 259 aa8.87□□□□□ -0.99
CLIP1-201ENST00000302528 ZNF562Q6V9R5 426 aa8.87□□□□□ -0.99
CLIP1-201ENST00000302528 TMEM86BQ8N661 226 aa8.87□□□□□ -0.99
CLIP1-201ENST00000302528 GPHA2Q96T91 129 aa8.87□□□□□ -0.99
CLIP1-201ENST00000302528 SSBP4Q9BWG4 385 aaPredicted RBP8.87□□□□□ -0.99
CLIP1-201ENST00000302528 SLC25A2Q9BXI2 301 aa8.87□□□□□ -0.99
CLIP1-201ENST00000302528 C2orf68Q2NKX9 166 aa8.87□□□□□ -0.99
CLIP1-201ENST00000302528 OR10J3Q5JRS4 329 aa8.87□□□□□ -0.99
CLIP1-201ENST00000302528 PKIBQ9C010 78 aa8.87□□□□□ -0.99
CLIP1-201ENST00000302528 S4R3C0 116 aa8.87□□□□□ -0.99
CLIP1-201ENST00000302528 H3BUT2 72 aa8.87□□□□□ -0.99
CLIP1-201ENST00000302528 PAX1P15863 534 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms