RNA–Protein interactions for RNA: ENST00000301935.9

UBXN1-202, Transcript of UBX domain protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene UBXN1, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-202ENST00000301935 R3HDM4Q96D70 268 aa12.07□□□□□ -0.48
UBXN1-202ENST00000301935 HARBI1Q96MB7 349 aa12.07□□□□□ -0.48
UBXN1-202ENST00000301935 SPIN2AQ99865 258 aa12.07□□□□□ -0.48
UBXN1-202ENST00000301935 SPIN2BQ9BPZ2 258 aa12.07□□□□□ -0.48
UBXN1-202ENST00000301935 NOTCH1P46531 2555 aa12.06□□□□□ -0.48
UBXN1-202ENST00000301935 BTBD17A6NE02 478 aa12.06□□□□□ -0.48
UBXN1-202ENST00000301935 MARCH11A6NNE9 402 aa12.06□□□□□ -0.48
UBXN1-202ENST00000301935 S1PR2O95136 353 aa12.06□□□□□ -0.48
UBXN1-202ENST00000301935 IGKV1-16P04430 117 aa12.06□□□□□ -0.48
UBXN1-202ENST00000301935 SNRNP70P08621 437 aaKnown RBP12.06□□□□□ -0.48
UBXN1-202ENST00000301935 FGF2P09038 288 aa12.06□□□□□ -0.48
UBXN1-202ENST00000301935 TRAPPC2P0DI81 140 aa12.06□□□□□ -0.48
UBXN1-202ENST00000301935 TRAPPC2BP0DI82 140 aa12.06□□□□□ -0.48
UBXN1-202ENST00000301935 AKR1C2P52895 323 aa12.06□□□□□ -0.48
UBXN1-202ENST00000301935 RRAS2P62070 204 aaPredicted RBP12.06□□□□□ -0.48
UBXN1-202ENST00000301935 HES1Q14469 280 aa12.06□□□□□ -0.48
UBXN1-202ENST00000301935 VMA21Q3ZAQ7 101 aa12.06□□□□□ -0.48
UBXN1-202ENST00000301935 H2BFWTQ7Z2G1 175 aa12.06□□□□□ -0.48
UBXN1-202ENST00000301935 TEX45Q8NA69 505 aa12.06□□□□□ -0.48
UBXN1-202ENST00000301935 DMBX1Q8NFW5 382 aa12.06□□□□□ -0.48
UBXN1-202ENST00000301935 OR4A5Q8NH83 315 aa12.06□□□□□ -0.48
UBXN1-202ENST00000301935 RNASE11Q8TAA1 199 aaKnown RBP12.06□□□□□ -0.48
UBXN1-202ENST00000301935 ASB13Q8WXK3 278 aa12.06□□□□□ -0.48
UBXN1-202ENST00000301935 SEC22AQ96IW7 307 aa12.06□□□□□ -0.48
UBXN1-202ENST00000301935 RHOVQ96L33 236 aa12.06□□□□□ -0.48
UBXN1-202ENST00000301935 SSX3Q99909 188 aa12.06□□□□□ -0.48
UBXN1-202ENST00000301935 WNK1Q9H4A3 2382 aa12.06□□□□□ -0.48
UBXN1-202ENST00000301935 IGHV3-72A0A0B4J1Y9 119 aa12.05□□□□□ -0.48
UBXN1-202ENST00000301935 A0A1B0GU03 582 aa12.05□□□□□ -0.48
UBXN1-202ENST00000301935 HMX3A6NHT5 357 aa12.05□□□□□ -0.48
UBXN1-202ENST00000301935 GPR137BO60478 399 aa12.05□□□□□ -0.48
UBXN1-202ENST00000301935 KRASP01116 189 aa12.05□□□□□ -0.48
UBXN1-202ENST00000301935 IGKV1D-33P01593 117 aa12.05□□□□□ -0.48
UBXN1-202ENST00000301935 IGKV1-33P01594 117 aa12.05□□□□□ -0.48
UBXN1-202ENST00000301935 IGKV1-39P01597 117 aa12.05□□□□□ -0.48
UBXN1-202ENST00000301935 IGHV4-59P01825 116 aa12.05□□□□□ -0.48
UBXN1-202ENST00000301935 IGKV1D-39P04432 117 aa12.05□□□□□ -0.48
UBXN1-202ENST00000301935 PROK1P58294 105 aa12.05□□□□□ -0.48
UBXN1-202ENST00000301935 UBE2KP61086 200 aa12.05□□□□□ -0.48
UBXN1-202ENST00000301935 CYCSP99999 105 aaKnown RBP12.05□□□□□ -0.48
UBXN1-202ENST00000301935 C16orf82Q7Z2V1 217 aa12.05□□□□□ -0.48
UBXN1-202ENST00000301935 SLC35G3Q8N808 338 aa12.05□□□□□ -0.48
UBXN1-202ENST00000301935 NPBQ8NG41 125 aa12.05□□□□□ -0.48
UBXN1-202ENST00000301935 LHFPL5Q8TAF8 219 aa12.05□□□□□ -0.48
UBXN1-202ENST00000301935 EAF1Q96JC9 268 aaPredicted RBP12.05□□□□□ -0.48
UBXN1-202ENST00000301935 KIAA1456Q9P272 454 aa12.05□□□□□ -0.48
UBXN1-202ENST00000301935 HOXB5P09067 269 aa12.04□□□□□ -0.48
UBXN1-202ENST00000301935 TMEM11P17152 192 aa12.04□□□□□ -0.48
UBXN1-202ENST00000301935 GGNBP1Q5YKI7 109 aa12.04□□□□□ -0.48
UBXN1-202ENST00000301935 GSG1LQ6UXU4 331 aa12.04□□□□□ -0.48
UBXN1-202ENST00000301935 LYZL2Q7Z4W2 148 aa12.04□□□□□ -0.48
UBXN1-202ENST00000301935 Q8N6K4 173 aa12.04□□□□□ -0.48
UBXN1-202ENST00000301935 CHAC2Q8WUX2 184 aa12.04□□□□□ -0.48
UBXN1-202ENST00000301935 COA4Q9NYJ1 87 aa12.04□□□□□ -0.48
UBXN1-202ENST00000301935 FKBP11Q9NYL4 201 aa12.04□□□□□ -0.48
UBXN1-202ENST00000301935 BET1LQ9NYM9 111 aa12.04□□□□□ -0.48
UBXN1-202ENST00000301935 M0QZK8 103 aa12.03□□□□□ -0.48
UBXN1-202ENST00000301935 SNAPC5O75971 98 aa12.03□□□□□ -0.48
UBXN1-202ENST00000301935 OR2A4O95047 310 aa12.03□□□□□ -0.48
UBXN1-202ENST00000301935 TSPAN15O95858 294 aa12.03□□□□□ -0.48
UBXN1-202ENST00000301935 SULT1A3P0DMM9 295 aa12.03□□□□□ -0.48
UBXN1-202ENST00000301935 SULT1A4P0DMN0 295 aa12.03□□□□□ -0.48
UBXN1-202ENST00000301935 G6PCP35575 357 aa12.03□□□□□ -0.48
UBXN1-202ENST00000301935 IER3P46695 156 aa12.03□□□□□ -0.48
UBXN1-202ENST00000301935 NMSQ5H8A3 153 aa12.03□□□□□ -0.48
UBXN1-202ENST00000301935 THOC7Q6I9Y2 204 aaKnown RBP12.03□□□□□ -0.48
UBXN1-202ENST00000301935 PUSL1Q8N0Z8 303 aaKnown RBP12.03□□□□□ -0.48
UBXN1-202ENST00000301935 OR2A7Q96R45 310 aa12.03□□□□□ -0.48
UBXN1-202ENST00000301935 C5orf51A6NDU8 294 aa12.02□□□□□ -0.49
UBXN1-202ENST00000301935 SRRM4A7MD48 611 aaKnown RBP12.02□□□□□ -0.49
UBXN1-202ENST00000301935 H3BUX3 64 aa12.02□□□□□ -0.49
UBXN1-202ENST00000301935 RRHO14718 337 aa12.02□□□□□ -0.49
UBXN1-202ENST00000301935 NBR2O15453 112 aa12.02□□□□□ -0.49
UBXN1-202ENST00000301935 OR2F2O95006 317 aa12.02□□□□□ -0.49
UBXN1-202ENST00000301935 NDUFA3O95167 84 aa12.02□□□□□ -0.49
UBXN1-202ENST00000301935 IGKV1-5P01602 117 aa12.02□□□□□ -0.49
UBXN1-202ENST00000301935 IGLV2-23P01705 113 aa12.02□□□□□ -0.49
UBXN1-202ENST00000301935 IL6RP08887 468 aaPredicted RBP12.02□□□□□ -0.49
UBXN1-202ENST00000301935 P0C879 139 aa12.02□□□□□ -0.49
UBXN1-202ENST00000301935 MAS1LP35410 378 aa12.02□□□□□ -0.49
UBXN1-202ENST00000301935 BCAP31P51572 246 aa12.02□□□□□ -0.49
UBXN1-202ENST00000301935 SMCO1Q147U7 214 aa12.02□□□□□ -0.49
UBXN1-202ENST00000301935 PSG5Q15238 335 aa12.02□□□□□ -0.49
UBXN1-202ENST00000301935 MMDQ15546 238 aa12.02□□□□□ -0.49
UBXN1-202ENST00000301935 OR4A47Q6IF82 309 aa12.02□□□□□ -0.49
UBXN1-202ENST00000301935 Q6ZSV7 163 aa12.02□□□□□ -0.49
UBXN1-202ENST00000301935 C1QL4Q86Z23 238 aa12.02□□□□□ -0.49
UBXN1-202ENST00000301935 OR5M8Q8NGP6 311 aa12.02□□□□□ -0.49
UBXN1-202ENST00000301935 TMEM167AQ8TBQ9 72 aa12.02□□□□□ -0.49
UBXN1-202ENST00000301935 PIFOQ8TCI5 191 aa12.02□□□□□ -0.49
UBXN1-202ENST00000301935 C2orf50Q96LR7 162 aa12.02□□□□□ -0.49
UBXN1-202ENST00000301935 RBM14Q96PK6 669 aaKnown RBP12.02□□□□□ -0.49
UBXN1-202ENST00000301935 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.02□□□□□ -0.49
UBXN1-202ENST00000301935 ZFP57Q9NU63 452 aa12.02□□□□□ -0.49
UBXN1-202ENST00000301935 TMEM140Q9NV12 185 aa12.02□□□□□ -0.49
UBXN1-202ENST00000301935 PRR13Q9NZ81 148 aa12.02□□□□□ -0.49
UBXN1-202ENST00000301935 MGAT4CQ9UBM8 478 aa12.02□□□□□ -0.49
UBXN1-202ENST00000301935 PRNDQ9UKY0 176 aa12.02□□□□□ -0.49
UBXN1-202ENST00000301935 TCF19Q9Y242 345 aa12.02□□□□□ -0.49
UBXN1-202ENST00000301935 A6NDX4 124 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms