RNA–Protein interactions for RNA: ENST00000296215.7

SNIP1-201, Transcript of Smad nuclear interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNIP1, Length 4,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-201ENST00000296215 TMEM229AB2RXF0 380 aa9.98□□□□□ -0.81
SNIP1-201ENST00000296215 PSG2P11465 335 aa9.98□□□□□ -0.81
SNIP1-201ENST00000296215 CYB5D2Q8WUJ1 264 aa9.98□□□□□ -0.81
SNIP1-201ENST00000296215 PRSS27Q9BQR3 290 aa9.98□□□□□ -0.81
SNIP1-201ENST00000296215 FZR1Q9UM11 496 aa9.98□□□□□ -0.81
SNIP1-201ENST00000296215 TM4SF4P48230 202 aa9.98□□□□□ -0.81
SNIP1-201ENST00000296215 OR1L4Q8NGR5 311 aa9.98□□□□□ -0.81
SNIP1-201ENST00000296215 C18orf15Q96N68 181 aa9.98□□□□□ -0.81
SNIP1-201ENST00000296215 A0A1W2PQF6 199 aa9.98□□□□□ -0.81
SNIP1-201ENST00000296215 SMIM9A6NGZ8 99 aa9.98□□□□□ -0.81
SNIP1-201ENST00000296215 DRD3P35462 400 aa9.98□□□□□ -0.81
SNIP1-201ENST00000296215 OR5AS1Q8N127 324 aa9.98□□□□□ -0.81
SNIP1-201ENST00000296215 C1QTNF5Q9BXJ0 243 aa9.98□□□□□ -0.81
SNIP1-201ENST00000296215 CRISPLD2Q9H0B8 497 aa9.98□□□□□ -0.81
SNIP1-201ENST00000296215 SSUH2Q9Y2M2 353 aa9.98□□□□□ -0.81
SNIP1-201ENST00000296215 POLDIP2Q9Y2S7 368 aa9.98□□□□□ -0.81
SNIP1-201ENST00000296215 TRAV25A0A0B4J276 109 aa9.97□□□□□ -0.81
SNIP1-201ENST00000296215 TMPRSS2O15393 492 aa9.97□□□□□ -0.81
SNIP1-201ENST00000296215 HAPLN4Q86UW8 402 aa9.97□□□□□ -0.81
SNIP1-201ENST00000296215 TNFRSF18Q9Y5U5 241 aa9.97□□□□□ -0.81
SNIP1-201ENST00000296215 PTPRFP10586 1907 aa9.97□□□□□ -0.81
SNIP1-201ENST00000296215 MT-ATP8P03928 68 aa9.97□□□□□ -0.81
SNIP1-201ENST00000296215 CTLA4P16410 223 aa9.97□□□□□ -0.81
SNIP1-201ENST00000296215 FCGR2BP31994 310 aaPredicted RBP9.97□□□□□ -0.81
SNIP1-201ENST00000296215 RPL30P62888 115 aaKnown RBP9.97□□□□□ -0.81
SNIP1-201ENST00000296215 ZNF525Q8N782 197 aa9.97□□□□□ -0.81
SNIP1-201ENST00000296215 COPS9Q8WXC6 57 aa9.97□□□□□ -0.81
SNIP1-201ENST00000296215 RASL11BQ9BPW5 248 aa9.97□□□□□ -0.81
SNIP1-201ENST00000296215 SFXN3Q9BWM7 321 aa9.97□□□□□ -0.81
SNIP1-201ENST00000296215 KNL1Q8NG31 2342 aa9.97□□□□□ -0.81
SNIP1-201ENST00000296215 MYO7AQ13402 2215 aa9.97□□□□□ -0.81
SNIP1-201ENST00000296215 F11P03951 625 aa9.97□□□□□ -0.81
SNIP1-201ENST00000296215 FAM106CPP0CH98 169 aa9.97□□□□□ -0.81
SNIP1-201ENST00000296215 FAM106AQ4KMX7 169 aa9.97□□□□□ -0.81
SNIP1-201ENST00000296215 FKBP1CQ5VVH2 108 aa9.97□□□□□ -0.81
SNIP1-201ENST00000296215 MORN3Q6PF18 240 aaPredicted RBP9.97□□□□□ -0.81
SNIP1-201ENST00000296215 VN1R2Q8NFZ6 395 aa9.97□□□□□ -0.81
SNIP1-201ENST00000296215 OR4C3Q8NH37 302 aa9.97□□□□□ -0.81
SNIP1-201ENST00000296215 OXGR1Q96P68 337 aa9.97□□□□□ -0.81
SNIP1-201ENST00000296215 KCPQ6ZWJ8 1503 aa9.97□□□□□ -0.81
SNIP1-201ENST00000296215 C9JAW5 83 aa9.97□□□□□ -0.81
SNIP1-201ENST00000296215 E9PQ18 207 aa9.97□□□□□ -0.81
SNIP1-201ENST00000296215 F2Z2F3 143 aa9.97□□□□□ -0.81
SNIP1-201ENST00000296215 RPL15P61313 204 aaKnown RBP9.97□□□□□ -0.81
SNIP1-201ENST00000296215 PLGLB1Q02325 96 aa9.97□□□□□ -0.81
SNIP1-201ENST00000296215 TMEFF1Q8IYR6 380 aa9.97□□□□□ -0.81
SNIP1-201ENST00000296215 RTL8AQ9BWD3 113 aa9.97□□□□□ -0.81
SNIP1-201ENST00000296215 OSTCQ9NRP0 149 aa9.97□□□□□ -0.81
SNIP1-201ENST00000296215 GNG12Q9UBI6 72 aa9.97□□□□□ -0.81
SNIP1-201ENST00000296215 HIGD1AQ9Y241 93 aa9.97□□□□□ -0.81
SNIP1-201ENST00000296215 MPDU1O75352 247 aa9.96□□□□□ -0.81
SNIP1-201ENST00000296215 NRN1LQ496H8 165 aa9.96□□□□□ -0.81
SNIP1-201ENST00000296215 PTCRAQ6ISU1 281 aaPredicted RBP9.96□□□□□ -0.81
SNIP1-201ENST00000296215 NUP37Q8NFH4 326 aa9.96□□□□□ -0.81
SNIP1-201ENST00000296215 C20orf78Q9BR46 151 aa9.96□□□□□ -0.81
SNIP1-201ENST00000296215 RGPD1P0DJD0 1748 aa9.96□□□□□ -0.81
SNIP1-201ENST00000296215 GNB1P62873 340 aa9.96□□□□□ -0.81
SNIP1-201ENST00000296215 FKBP1AP62942 108 aaKnown RBP9.96□□□□□ -0.81
SNIP1-201ENST00000296215 UNC119Q13432 240 aa9.96□□□□□ -0.81
SNIP1-201ENST00000296215 SGCBQ16585 318 aa9.96□□□□□ -0.81
SNIP1-201ENST00000296215 Q6ZUT4 128 aa9.96□□□□□ -0.81
SNIP1-201ENST00000296215 TAAR6Q96RI8 345 aa9.96□□□□□ -0.81
SNIP1-201ENST00000296215 TNRC6AQ8NDV7 1962 aaKnown RBP9.96□□□□□ -0.82
SNIP1-201ENST00000296215 CYBAP13498 195 aa9.96□□□□□ -0.82
SNIP1-201ENST00000296215 TBR1Q16650 682 aa9.96□□□□□ -0.82
SNIP1-201ENST00000296215 ZNF721Q8TF20 911 aa9.96□□□□□ -0.82
SNIP1-201ENST00000296215 AMELYQ99218 206 aa9.96□□□□□ -0.82
SNIP1-201ENST00000296215 NXT2Q9NPJ8 142 aaKnown RBP9.96□□□□□ -0.82
SNIP1-201ENST00000296215 ALPK2Q86TB3 2170 aa9.95□□□□□ -0.82
SNIP1-201ENST00000296215 TMEM14DPA8MWL7 114 aa9.95□□□□□ -0.82
SNIP1-201ENST00000296215 AREGP15514 252 aa9.95□□□□□ -0.82
SNIP1-201ENST00000296215 GCHFRP30047 84 aa9.95□□□□□ -0.82
SNIP1-201ENST00000296215 LGALS4P56470 323 aa9.95□□□□□ -0.82
SNIP1-201ENST00000296215 CX3CL1P78423 397 aa9.95□□□□□ -0.82
SNIP1-201ENST00000296215 ZNF114Q8NC26 417 aa9.95□□□□□ -0.82
SNIP1-201ENST00000296215 TMEM171Q8WVE6 324 aa9.95□□□□□ -0.82
SNIP1-201ENST00000296215 APOBEC4Q8WW27 367 aaKnown RBP9.95□□□□□ -0.82
SNIP1-201ENST00000296215 CHAC1Q9BUX1 264 aa9.95□□□□□ -0.82
SNIP1-201ENST00000296215 PDFQ9HBH1 243 aa9.95□□□□□ -0.82
SNIP1-201ENST00000296215 IL9P15248 144 aa9.95□□□□□ -0.82
SNIP1-201ENST00000296215 NDUFV3P56181 108 aaKnown RBP9.95□□□□□ -0.82
SNIP1-201ENST00000296215 KIR3DL3Q8N743 410 aa9.95□□□□□ -0.82
SNIP1-201ENST00000296215 ZIC4Q8N9L1 334 aa9.95□□□□□ -0.82
SNIP1-201ENST00000296215 GPHA2Q96T91 129 aa9.95□□□□□ -0.82
SNIP1-201ENST00000296215 LRRC37A3O60309 1634 aa9.95□□□□□ -0.82
SNIP1-201ENST00000296215 LMO1P25800 156 aa9.95□□□□□ -0.82
SNIP1-201ENST00000296215 YPEL5P62699 121 aa9.95□□□□□ -0.82
SNIP1-201ENST00000296215 OSR1Q8TAX0 266 aaPredicted RBP9.95□□□□□ -0.82
SNIP1-201ENST00000296215 WNT16Q9UBV4 365 aa9.95□□□□□ -0.82
SNIP1-201ENST00000296215 M0R135 149 aa9.95□□□□□ -0.82
SNIP1-201ENST00000296215 SPINT2O43291 252 aa9.95□□□□□ -0.82
SNIP1-201ENST00000296215 CKS2P33552 79 aa9.95□□□□□ -0.82
SNIP1-201ENST00000296215 KIR2DL1P43626 348 aaPredicted RBP9.95□□□□□ -0.82
SNIP1-201ENST00000296215 MIC13Q5XKP0 118 aa9.95□□□□□ -0.82
SNIP1-201ENST00000296215 ZNF799Q96GE5 643 aa9.95□□□□□ -0.82
SNIP1-201ENST00000296215 SIGLEC8Q9NYZ4 499 aa9.95□□□□□ -0.82
SNIP1-201ENST00000296215 A0A0A6YYD5 115 aa9.94□□□□□ -0.82
SNIP1-201ENST00000296215 HIGD1CA8MV81 97 aa9.94□□□□□ -0.82
SNIP1-201ENST00000296215 SP1P08047 785 aa9.94□□□□□ -0.82
SNIP1-201ENST00000296215 C15orf53Q8NAA6 179 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms