RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 TUBD1Q9UJT1 453 aa14.95□□□□□ -0.02
CDC42EP3-201ENST00000295324 ELF5Q9UKW6 265 aaPredicted RBP14.95□□□□□ -0.02
CDC42EP3-201ENST00000295324 DOCK4Q8N1I0 1966 aa14.95□□□□□ -0.02
CDC42EP3-201ENST00000295324 AP4M1O00189 453 aa14.95□□□□□ -0.02
CDC42EP3-201ENST00000295324 NBL1P41271 181 aa14.95□□□□□ -0.02
CDC42EP3-201ENST00000295324 TCL1AP56279 114 aa14.95□□□□□ -0.02
CDC42EP3-201ENST00000295324 ELOA3CA0A087WX78 387 aaPredicted RBP14.95□□□□□ -0.02
CDC42EP3-201ENST00000295324 C5orf52A6NGY3 159 aa14.95□□□□□ -0.02
CDC42EP3-201ENST00000295324 REG1AP05451 166 aa14.95□□□□□ -0.02
CDC42EP3-201ENST00000295324 DUX5Q96PT3 197 aa14.95□□□□□ -0.02
CDC42EP3-201ENST00000295324 NPFFR1Q9GZQ6 430 aa14.95□□□□□ -0.02
CDC42EP3-201ENST00000295324 C5orf66Q9H5L9 145 aa14.95□□□□□ -0.02
CDC42EP3-201ENST00000295324 SRD5A3Q9H8P0 318 aa14.95□□□□□ -0.02
CDC42EP3-201ENST00000295324 TXNDC17Q9BRA2 123 aa14.95□□□□□ -0.02
CDC42EP3-201ENST00000295324 VWA8A3KMH1 1905 aa14.95□□□□□ -0.02
CDC42EP3-201ENST00000295324 IGHV3OR16-12A0A075B7B8 117 aa14.94□□□□□ -0.02
CDC42EP3-201ENST00000295324 LYPD3O95274 346 aa14.94□□□□□ -0.02
CDC42EP3-201ENST00000295324 ZNF385CQ66K41 422 aaPredicted RBP14.94□□□□□ -0.02
CDC42EP3-201ENST00000295324 FBXL15Q9H469 300 aa14.94□□□□□ -0.02
CDC42EP3-201ENST00000295324 DNAJC4Q9NNZ3 241 aa14.94□□□□□ -0.02
CDC42EP3-201ENST00000295324 M0R2Z0 102 aa14.94□□□□□ -0.02
CDC42EP3-201ENST00000295324 LBHQ53QV2 105 aaPredicted RBP14.94□□□□□ -0.02
CDC42EP3-201ENST00000295324 PLA2G2CQ5R387 149 aa14.94□□□□□ -0.02
CDC42EP3-201ENST00000295324 VKORC1L1Q8N0U8 176 aa14.94□□□□□ -0.02
CDC42EP3-201ENST00000295324 B4DEV8 164 aa14.94□□□□□ -0.02
CDC42EP3-201ENST00000295324 RUNX1Q01196 453 aa14.94□□□□□ -0.02
CDC42EP3-201ENST00000295324 LAIR2Q6ISS4 152 aa14.94□□□□□ -0.02
CDC42EP3-201ENST00000295324 CHAC2Q8WUX2 184 aa14.94□□□□□ -0.02
CDC42EP3-201ENST00000295324 RGP1Q92546 391 aaPredicted RBP14.94□□□□□ -0.02
CDC42EP3-201ENST00000295324 TTC28Q96AY4 2481 aa14.94□□□□□ -0.02
CDC42EP3-201ENST00000295324 TMSB15BA0A087X1C1 80 aa14.94□□□□□ -0.02
CDC42EP3-201ENST00000295324 SRSF6Q13247 344 aaKnown RBP14.94□□□□□ -0.02
CDC42EP3-201ENST00000295324 HLA-DRB5Q30154 266 aa14.94□□□□□ -0.02
CDC42EP3-201ENST00000295324 TAF15Q92804 592 aaKnown RBP eCLIP14.94□□□□□ -0.02
CDC42EP3-201ENST00000295324 COL25A1Q9BXS0 654 aaPredicted RBP14.94□□□□□ -0.02
CDC42EP3-201ENST00000295324 EFNA2O43921 213 aa14.93□□□□□ -0.02
CDC42EP3-201ENST00000295324 PLAUP00749 431 aa14.93□□□□□ -0.02
CDC42EP3-201ENST00000295324 WFIKKN1Q96NZ8 548 aa14.93□□□□□ -0.02
CDC42EP3-201ENST00000295324 OR5AC2Q9NZP5 309 aa14.93□□□□□ -0.02
CDC42EP3-201ENST00000295324 A0A0G2JK05 382 aa14.93□□□□□ -0.02
CDC42EP3-201ENST00000295324 MOSP00540 346 aa14.93□□□□□ -0.02
CDC42EP3-201ENST00000295324 EFNA4P52798 201 aa14.93□□□□□ -0.02
CDC42EP3-201ENST00000295324 DIDO1Q9BTC0 2240 aaKnown RBP14.93□□□□□ -0.02
CDC42EP3-201ENST00000295324 ELOBQ15370 118 aa14.93□□□□□ -0.02
CDC42EP3-201ENST00000295324 LRP11Q86VZ4 500 aa14.93□□□□□ -0.02
CDC42EP3-201ENST00000295324 C9orf62Q8N4C0 152 aa14.93□□□□□ -0.02
CDC42EP3-201ENST00000295324 STAG3L2P0CL84 134 aa14.93□□□□□ -0.02
CDC42EP3-201ENST00000295324 SMAGPQ0VAQ4 97 aa14.93□□□□□ -0.02
CDC42EP3-201ENST00000295324 MIC13Q5XKP0 118 aa14.93□□□□□ -0.02
CDC42EP3-201ENST00000295324 ZCCHC24Q8N2G6 241 aaKnown RBP14.93□□□□□ -0.02
CDC42EP3-201ENST00000295324 TMEM191AQ9H0A3 160 aa14.93□□□□□ -0.02
CDC42EP3-201ENST00000295324 A0A087X0M5 115 aa14.92□□□□□ -0.02
CDC42EP3-201ENST00000295324 A0A1B0GX30 115 aa14.92□□□□□ -0.02
CDC42EP3-201ENST00000295324 MBD3L4A6NDZ8 208 aaPredicted RBP14.92□□□□□ -0.02
CDC42EP3-201ENST00000295324 MBD3L3A6NE82 208 aaPredicted RBP14.92□□□□□ -0.02
CDC42EP3-201ENST00000295324 MBD3L5A6NJ08 208 aaPredicted RBP14.92□□□□□ -0.02
CDC42EP3-201ENST00000295324 M0QZK8 103 aa14.92□□□□□ -0.02
CDC42EP3-201ENST00000295324 IGHG3P01860 377 aa14.92□□□□□ -0.02
CDC42EP3-201ENST00000295324 CA7P43166 264 aa14.92□□□□□ -0.02
CDC42EP3-201ENST00000295324 PSG9Q00887 426 aa14.92□□□□□ -0.02
CDC42EP3-201ENST00000295324 WDR82Q6UXN9 313 aa14.92□□□□□ -0.02
CDC42EP3-201ENST00000295324 WDFY1Q8IWB7 410 aa14.92□□□□□ -0.02
CDC42EP3-201ENST00000295324 MBD3L2Q8NHZ7 208 aaPredicted RBP14.92□□□□□ -0.02
CDC42EP3-201ENST00000295324 RSG1Q9BU20 258 aa14.92□□□□□ -0.02
CDC42EP3-201ENST00000295324 ABCA4P78363 2273 aa14.92□□□□□ -0.02
CDC42EP3-201ENST00000295324 SNRPCP09234 159 aaKnown RBP14.92□□□□□ -0.02
CDC42EP3-201ENST00000295324 TSPOP30536 169 aa14.92□□□□□ -0.02
CDC42EP3-201ENST00000295324 TMEM116Q8NCL8 245 aa14.92□□□□□ -0.02
CDC42EP3-201ENST00000295324 OR51G1Q8NGK1 321 aa14.92□□□□□ -0.02
CDC42EP3-201ENST00000295324 SNRPD3P62318 126 aaKnown RBP14.92□□□□□ -0.02
CDC42EP3-201ENST00000295324 SMIM8Q96KF7 97 aa14.92□□□□□ -0.02
CDC42EP3-201ENST00000295324 NCMAPQ5T1S8 102 aa14.92□□□□□ -0.02
CDC42EP3-201ENST00000295324 OR2D3Q8NGH3 330 aa14.92□□□□□ -0.02
CDC42EP3-201ENST00000295324 C19orf24Q9BVV8 132 aa14.92□□□□□ -0.02
CDC42EP3-201ENST00000295324 PRSS1P07477 247 aa14.91□□□□□ -0.02
CDC42EP3-201ENST00000295324 TMEM187Q14656 261 aa14.91□□□□□ -0.02
CDC42EP3-201ENST00000295324 PPP1R27Q86WC6 154 aa14.91□□□□□ -0.02
CDC42EP3-201ENST00000295324 IL36RNQ9UBH0 155 aa14.91□□□□□ -0.02
CDC42EP3-201ENST00000295324 CRISP2P16562 243 aa14.91□□□□□ -0.02
CDC42EP3-201ENST00000295324 NPIPB3Q92617 1050 aa14.91□□□□□ -0.02
CDC42EP3-201ENST00000295324 AP5S1Q9NUS5 200 aa14.91□□□□□ -0.02
CDC42EP3-201ENST00000295324 HKR1P10072 659 aa14.91□□□□□ -0.02
CDC42EP3-201ENST00000295324 PGPA6NDG6 321 aa14.91□□□□□ -0.02
CDC42EP3-201ENST00000295324 CSN3P07498 182 aa14.91□□□□□ -0.02
CDC42EP3-201ENST00000295324 C8orf88P0DMB2 117 aa14.91□□□□□ -0.02
CDC42EP3-201ENST00000295324 EIF4E3Q8N5X7 224 aaKnown RBP14.91□□□□□ -0.02
CDC42EP3-201ENST00000295324 SYT8Q8NBV8 401 aa14.91□□□□□ -0.02
CDC42EP3-201ENST00000295324 ROS1P08922 2347 aa14.91□□□□□ -0.02
CDC42EP3-201ENST00000295324 IGHV1-46P01743 117 aa14.91□□□□□ -0.02
CDC42EP3-201ENST00000295324 ANK1P16157 1881 aa14.9□□□□□ -0.02
CDC42EP3-201ENST00000295324 ZSWIM8A7E2V4 1837 aa14.9□□□□□ -0.02
CDC42EP3-201ENST00000295324 A0A0G2JNJ9 132 aa14.9□□□□□ -0.02
CDC42EP3-201ENST00000295324 LYNX1G3V0Z9 82 aa14.9□□□□□ -0.02
CDC42EP3-201ENST00000295324 MELTFP08582 738 aa14.9□□□□□ -0.02
CDC42EP3-201ENST00000295324 LYNX1P0DP58 116 aa14.9□□□□□ -0.02
CDC42EP3-201ENST00000295324 MST1P26927 711 aa14.9□□□□□ -0.02
CDC42EP3-201ENST00000295324 PLSCR2Q9NRY7 297 aa14.9□□□□□ -0.02
CDC42EP3-201ENST00000295324 Q9UFV3 132 aa14.9□□□□□ -0.02
CDC42EP3-201ENST00000295324 DOCK8Q8NF50 2099 aa14.9□□□□□ -0.02
CDC42EP3-201ENST00000295324 CGB1A6NKQ9 187 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms