RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 CDX1P47902 265 aaPredicted RBP13.04□□□□□ -0.32
NCKIPSD-201ENST00000294129 PSMB3P49720 205 aa13.04□□□□□ -0.32
NCKIPSD-201ENST00000294129 RTP5Q14D33 572 aa13.04□□□□□ -0.32
NCKIPSD-201ENST00000294129 SPNS3Q6ZMD2 512 aa13.04□□□□□ -0.32
NCKIPSD-201ENST00000294129 SFXN3Q9BWM7 321 aa13.04□□□□□ -0.32
NCKIPSD-201ENST00000294129 ACTR3CQ9C0K3 210 aaPredicted RBP13.04□□□□□ -0.32
NCKIPSD-201ENST00000294129 AURKAIP1Q9NWT8 199 aaPredicted RBP13.04□□□□□ -0.32
NCKIPSD-201ENST00000294129 TP53TG5Q9Y2B4 290 aa13.04□□□□□ -0.32
NCKIPSD-201ENST00000294129 A0A1B0GWJ7 208 aa13.04□□□□□ -0.32
NCKIPSD-201ENST00000294129 NDUFS6O75380 124 aaKnown RBP13.04□□□□□ -0.32
NCKIPSD-201ENST00000294129 LHBP01229 141 aa13.04□□□□□ -0.32
NCKIPSD-201ENST00000294129 S100A2P29034 98 aa13.04□□□□□ -0.32
NCKIPSD-201ENST00000294129 GFI1BQ5VTD9 330 aa13.04□□□□□ -0.32
NCKIPSD-201ENST00000294129 TCTEX1D1Q8N7M0 179 aa13.04□□□□□ -0.32
NCKIPSD-201ENST00000294129 FAM57AQ8TBR7 257 aa13.04□□□□□ -0.32
NCKIPSD-201ENST00000294129 RHOVQ96L33 236 aa13.04□□□□□ -0.32
NCKIPSD-201ENST00000294129 PFDN5Q99471 154 aa13.04□□□□□ -0.32
NCKIPSD-201ENST00000294129 IGLV3-9A0A075B6K5 115 aa13.03□□□□□ -0.32
NCKIPSD-201ENST00000294129 TRGC2P03986 189 aa13.03□□□□□ -0.32
NCKIPSD-201ENST00000294129 RND1Q92730 232 aa13.03□□□□□ -0.32
NCKIPSD-201ENST00000294129 TMEM204Q9BSN7 226 aa13.03□□□□□ -0.32
NCKIPSD-201ENST00000294129 HIPK2Q9H2X6 1198 aa13.03□□□□□ -0.32
NCKIPSD-201ENST00000294129 GAR1Q9NY12 217 aaKnown RBP13.03□□□□□ -0.32
NCKIPSD-201ENST00000294129 TIMM9Q9Y5J7 89 aa13.03□□□□□ -0.32
NCKIPSD-201ENST00000294129 PLXNB1O43157 2135 aa13.03□□□□□ -0.32
NCKIPSD-201ENST00000294129 A0A0G2JNJ9 132 aa13.03□□□□□ -0.32
NCKIPSD-201ENST00000294129 MKRN2OSH3BPM6 223 aa13.03□□□□□ -0.32
NCKIPSD-201ENST00000294129 IRF2P14316 349 aa13.03□□□□□ -0.32
NCKIPSD-201ENST00000294129 SSMEM1Q8WWF3 244 aa13.03□□□□□ -0.32
NCKIPSD-201ENST00000294129 SDF2L1Q9HCN8 221 aa13.03□□□□□ -0.32
NCKIPSD-201ENST00000294129 Q9UFV3 132 aa13.03□□□□□ -0.32
NCKIPSD-201ENST00000294129 ATRXP46100 2492 aa13.03□□□□□ -0.32
NCKIPSD-201ENST00000294129 TACC2O95359 2948 aa13.02□□□□□ -0.32
NCKIPSD-201ENST00000294129 A0A087WWC5 75 aa13.02□□□□□ -0.32
NCKIPSD-201ENST00000294129 KBTBD11-OT1A0A1B0GTJ5 212 aa13.02□□□□□ -0.32
NCKIPSD-201ENST00000294129 F2RL2O00254 374 aa13.02□□□□□ -0.32
NCKIPSD-201ENST00000294129 LY86O95711 162 aa13.02□□□□□ -0.32
NCKIPSD-201ENST00000294129 CDC34P49427 236 aaPredicted RBP13.02□□□□□ -0.32
NCKIPSD-201ENST00000294129 MRPS11P82912 194 aaKnown RBP13.02□□□□□ -0.32
NCKIPSD-201ENST00000294129 CST9LP1Q5W188 147 aa13.02□□□□□ -0.32
NCKIPSD-201ENST00000294129 WDR25Q64LD2 544 aaPredicted RBP13.02□□□□□ -0.32
NCKIPSD-201ENST00000294129 DOLPP1Q86YN1 238 aa13.02□□□□□ -0.32
NCKIPSD-201ENST00000294129 OR10D4PQ8NGN7 298 aa13.02□□□□□ -0.32
NCKIPSD-201ENST00000294129 GFOD1Q9NXC2 390 aa13.02□□□□□ -0.32
NCKIPSD-201ENST00000294129 HIST1H2BKO60814 126 aa13.02□□□□□ -0.33
NCKIPSD-201ENST00000294129 HIST1H2BJP06899 126 aa13.02□□□□□ -0.33
NCKIPSD-201ENST00000294129 TNFSF4P23510 183 aa13.02□□□□□ -0.33
NCKIPSD-201ENST00000294129 HIST1H2BOP23527 126 aa13.02□□□□□ -0.33
NCKIPSD-201ENST00000294129 HIST1H2BBP33778 126 aa13.02□□□□□ -0.33
NCKIPSD-201ENST00000294129 CFHR2P36980 270 aa13.02□□□□□ -0.33
NCKIPSD-201ENST00000294129 HIST1H2BDP58876 126 aa13.02□□□□□ -0.33
NCKIPSD-201ENST00000294129 HIST1H2BCP62807 126 aa13.02□□□□□ -0.33
NCKIPSD-201ENST00000294129 HIST2H2BEQ16778 126 aa13.02□□□□□ -0.33
NCKIPSD-201ENST00000294129 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.02□□□□□ -0.33
NCKIPSD-201ENST00000294129 ZNF383Q8NA42 475 aa13.02□□□□□ -0.33
NCKIPSD-201ENST00000294129 HIST1H2BHQ93079 126 aa13.02□□□□□ -0.33
NCKIPSD-201ENST00000294129 GAFA1Q96PS6 74 aa13.02□□□□□ -0.33
NCKIPSD-201ENST00000294129 HIST1H2BNQ99877 126 aa13.02□□□□□ -0.33
NCKIPSD-201ENST00000294129 HIST1H2BMQ99879 126 aa13.02□□□□□ -0.33
NCKIPSD-201ENST00000294129 PARD6GQ9BYG4 376 aaPredicted RBP13.02□□□□□ -0.33
NCKIPSD-201ENST00000294129 C17orf112F2Z3M2 114 aa13.02□□□□□ -0.33
NCKIPSD-201ENST00000294129 PRRG2O14669 202 aa13.02□□□□□ -0.33
NCKIPSD-201ENST00000294129 SPCS3P61009 180 aa13.02□□□□□ -0.33
NCKIPSD-201ENST00000294129 RELBQ01201 579 aa13.02□□□□□ -0.33
NCKIPSD-201ENST00000294129 PRR30Q53SZ7 412 aaPredicted RBP13.02□□□□□ -0.33
NCKIPSD-201ENST00000294129 OR51G1Q8NGK1 321 aa13.02□□□□□ -0.33
NCKIPSD-201ENST00000294129 TCF19Q9Y242 345 aa13.02□□□□□ -0.33
NCKIPSD-201ENST00000294129 CEACAM8P31997 349 aaPredicted RBP13.01□□□□□ -0.33
NCKIPSD-201ENST00000294129 GNB2P62879 340 aa13.01□□□□□ -0.33
NCKIPSD-201ENST00000294129 MIC13Q5XKP0 118 aa13.01□□□□□ -0.33
NCKIPSD-201ENST00000294129 TCF23Q7RTU1 214 aa13.01□□□□□ -0.33
NCKIPSD-201ENST00000294129 OR4S2Q8NH73 311 aa13.01□□□□□ -0.33
NCKIPSD-201ENST00000294129 GPR61Q9BZJ8 451 aa13.01□□□□□ -0.33
NCKIPSD-201ENST00000294129 PARLQ9H300 379 aa13.01□□□□□ -0.33
NCKIPSD-201ENST00000294129 MS4A5Q9H3V2 200 aa13.01□□□□□ -0.33
NCKIPSD-201ENST00000294129 DMRT1Q9Y5R6 373 aa13.01□□□□□ -0.33
NCKIPSD-201ENST00000294129 A0A1W2PPV4 95 aa13.01□□□□□ -0.33
NCKIPSD-201ENST00000294129 MBP02144 154 aa13.01□□□□□ -0.33
NCKIPSD-201ENST00000294129 PDLIM3Q53GG5 364 aaPredicted RBP13.01□□□□□ -0.33
NCKIPSD-201ENST00000294129 STUMQ69YW2 141 aa13.01□□□□□ -0.33
NCKIPSD-201ENST00000294129 FAM122AQ96E09 287 aa13.01□□□□□ -0.33
NCKIPSD-201ENST00000294129 FAM210BQ96KR6 192 aa13.01□□□□□ -0.33
NCKIPSD-201ENST00000294129 IL19Q9UHD0 177 aa13.01□□□□□ -0.33
NCKIPSD-201ENST00000294129 CLDN34H7C241 214 aa13□□□□□ -0.33
NCKIPSD-201ENST00000294129 OR4A8P0C604 315 aa13□□□□□ -0.33
NCKIPSD-201ENST00000294129 BSPH1Q075Z2 132 aa13□□□□□ -0.33
NCKIPSD-201ENST00000294129 ACOT6Q3I5F7 207 aaPredicted RBP13□□□□□ -0.33
NCKIPSD-201ENST00000294129 OR4A47Q6IF82 309 aa13□□□□□ -0.33
NCKIPSD-201ENST00000294129 TMEM108Q6UXF1 575 aa13□□□□□ -0.33
NCKIPSD-201ENST00000294129 GFRALQ6UXV0 394 aa13□□□□□ -0.33
NCKIPSD-201ENST00000294129 P2RX4Q99571 388 aa13□□□□□ -0.33
NCKIPSD-201ENST00000294129 SIRT7Q9NRC8 400 aa13□□□□□ -0.33
NCKIPSD-201ENST00000294129 ABCA1O95477 2261 aa13□□□□□ -0.33
NCKIPSD-201ENST00000294129 C16orf97H3BN30 126 aa13□□□□□ -0.33
NCKIPSD-201ENST00000294129 REG1BP48304 166 aa13□□□□□ -0.33
NCKIPSD-201ENST00000294129 PAX5Q02548 391 aa13□□□□□ -0.33
NCKIPSD-201ENST00000294129 FOXC1Q12948 553 aa13□□□□□ -0.33
NCKIPSD-201ENST00000294129 TMEM241Q24JQ0 296 aa13□□□□□ -0.33
NCKIPSD-201ENST00000294129 CENPVQ7Z7K6 275 aaPredicted RBP13□□□□□ -0.33
NCKIPSD-201ENST00000294129 C1orf87Q8N0U7 546 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms