RNA–Protein interactions for RNA: ENST00000289448.2

HMHB1-201, Transcript of histocompatibility minor HB-1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HMHB1, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMHB1-201ENST00000289448 C7orf50Q9BRJ6 194 aaKnown RBP7.32□□□□□ -1.24
HMHB1-201ENST00000289448 GINS4Q9BRT9 223 aa7.32□□□□□ -1.24
HMHB1-201ENST00000289448 ST6GALNAC5Q9BVH7 336 aa7.32□□□□□ -1.24
HMHB1-201ENST00000289448 SLA2Q9H6Q3 261 aa7.32□□□□□ -1.24
HMHB1-201ENST00000289448 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.32□□□□□ -1.24
HMHB1-201ENST00000289448 ZNF355PQ9NSJ1 428 aa7.32□□□□□ -1.24
HMHB1-201ENST00000289448 RBMX2Q9Y388 322 aaKnown RBP7.32□□□□□ -1.24
HMHB1-201ENST00000289448 DYNC2H1Q8NCM8 4307 aaKnown RBP7.32□□□□□ -1.24
HMHB1-201ENST00000289448 TRAV18A0A075B6X5 111 aa7.31□□□□□ -1.24
HMHB1-201ENST00000289448 IGKV1D-13A0A0B4J2D9 117 aa7.31□□□□□ -1.24
HMHB1-201ENST00000289448 LINC00854A0A1B0GVQ3 168 aa7.31□□□□□ -1.24
HMHB1-201ENST00000289448 ANKRD34BA5PLL1 514 aa7.31□□□□□ -1.24
HMHB1-201ENST00000289448 TMEM235A6NFC5 223 aa7.31□□□□□ -1.24
HMHB1-201ENST00000289448 SULT1C2O00338 296 aa7.31□□□□□ -1.24
HMHB1-201ENST00000289448 SHOXO15266 292 aa7.31□□□□□ -1.24
HMHB1-201ENST00000289448 SSX5O60225 188 aa7.31□□□□□ -1.24
HMHB1-201ENST00000289448 CRYZL1O95825 349 aa7.31□□□□□ -1.24
HMHB1-201ENST00000289448 IGLV2-14P01704 120 aa7.31□□□□□ -1.24
HMHB1-201ENST00000289448 TRBV12-3P01733 135 aa7.31□□□□□ -1.24
HMHB1-201ENST00000289448 APELAP0DMC3 54 aa7.31□□□□□ -1.24
HMHB1-201ENST00000289448 IGKV1-13P0DP09 117 aa7.31□□□□□ -1.24
HMHB1-201ENST00000289448 GP9P14770 177 aa7.31□□□□□ -1.24
HMHB1-201ENST00000289448 NFYAP23511 347 aaPredicted RBP7.31□□□□□ -1.24
HMHB1-201ENST00000289448 DTYMKP23919 212 aa7.31□□□□□ -1.24
HMHB1-201ENST00000289448 SSBP1Q04837 148 aaKnown RBP7.31□□□□□ -1.24
HMHB1-201ENST00000289448 DYRK1AQ13627 763 aa7.31□□□□□ -1.24
HMHB1-201ENST00000289448 PRSS8Q16651 343 aa7.31□□□□□ -1.24
HMHB1-201ENST00000289448 IL34Q6ZMJ4 242 aa7.31□□□□□ -1.24
HMHB1-201ENST00000289448 IDO2Q6ZQW0 420 aa7.31□□□□□ -1.24
HMHB1-201ENST00000289448 OVCH2Q7RTZ1 564 aa7.31□□□□□ -1.24
HMHB1-201ENST00000289448 NRARPQ7Z6K4 114 aa7.31□□□□□ -1.24
HMHB1-201ENST00000289448 SBSPONQ8IVN8 264 aa7.31□□□□□ -1.24
HMHB1-201ENST00000289448 TOMM5Q8N4H5 51 aa7.31□□□□□ -1.24
HMHB1-201ENST00000289448 OR52I2Q8NH67 350 aa7.31□□□□□ -1.24
HMHB1-201ENST00000289448 ENKURQ8TC29 256 aa7.31□□□□□ -1.24
HMHB1-201ENST00000289448 FCAMRQ8WWV6 532 aa7.31□□□□□ -1.24
HMHB1-201ENST00000289448 DEDD2Q8WXF8 326 aa7.31□□□□□ -1.24
HMHB1-201ENST00000289448 SCPEP1Q9HB40 452 aa7.31□□□□□ -1.24
HMHB1-201ENST00000289448 RBM7Q9Y580 266 aaKnown RBP7.31□□□□□ -1.24
HMHB1-201ENST00000289448 SMAD5-AS1Q9Y6J3 95 aa7.31□□□□□ -1.24
HMHB1-201ENST00000289448 TENM2Q9NT68 2774 aa7.31□□□□□ -1.24
HMHB1-201ENST00000289448 C13orf42A0A1B0GVH6 325 aa7.3□□□□□ -1.24
HMHB1-201ENST00000289448 MSGN1A6NI15 193 aa7.3□□□□□ -1.24
HMHB1-201ENST00000289448 CENPXA8MT69 81 aa7.3□□□□□ -1.24
HMHB1-201ENST00000289448 H3BUA1 57 aa7.3□□□□□ -1.24
HMHB1-201ENST00000289448 PFDN1O60925 122 aa7.3□□□□□ -1.24
HMHB1-201ENST00000289448 BCAP31P51572 246 aa7.3□□□□□ -1.24
HMHB1-201ENST00000289448 UBE2KP61086 200 aa7.3□□□□□ -1.24
HMHB1-201ENST00000289448 RPL30P62888 115 aaKnown RBP7.3□□□□□ -1.24
HMHB1-201ENST00000289448 TAGLNQ01995 201 aaKnown RBP7.3□□□□□ -1.24
HMHB1-201ENST00000289448 KLF9Q13886 244 aaPredicted RBP7.3□□□□□ -1.24
HMHB1-201ENST00000289448 KLF5Q13887 457 aaPredicted RBP7.3□□□□□ -1.24
HMHB1-201ENST00000289448 RTL8BQ17RB0 113 aa7.3□□□□□ -1.24
HMHB1-201ENST00000289448 TEX45Q8NA69 505 aa7.3□□□□□ -1.24
HMHB1-201ENST00000289448 ADAD2Q8NCV1 583 aaKnown RBP7.3□□□□□ -1.24
HMHB1-201ENST00000289448 PPP1R14BQ96C90 147 aa7.3□□□□□ -1.24
HMHB1-201ENST00000289448 ADTRPQ96IZ2 230 aa7.3□□□□□ -1.24
HMHB1-201ENST00000289448 TINAGL1Q9GZM7 467 aaPredicted RBP7.3□□□□□ -1.24
HMHB1-201ENST00000289448 AUNIPQ9H7T9 357 aa7.3□□□□□ -1.24
HMHB1-201ENST00000289448 SACSQ9NZJ4 4579 aa7.3□□□□□ -1.24
HMHB1-201ENST00000289448 CSMD3Q7Z407 3707 aa7.29□□□□□ -1.24
HMHB1-201ENST00000289448 RYR2Q92736 4967 aa7.29□□□□□ -1.24
HMHB1-201ENST00000289448 FAM240BA0A1B0GVZ2 78 aa7.29□□□□□ -1.24
HMHB1-201ENST00000289448 NAP1L6A6NFF2 107 aa7.29□□□□□ -1.24
HMHB1-201ENST00000289448 FCGR3BO75015 233 aa7.29□□□□□ -1.24
HMHB1-201ENST00000289448 BRI3O95415 125 aa7.29□□□□□ -1.24
HMHB1-201ENST00000289448 PRH1P02810 166 aa7.29□□□□□ -1.24
HMHB1-201ENST00000289448 FRMD6-AS1P0C7T7 363 aa7.29□□□□□ -1.24
HMHB1-201ENST00000289448 SAA1P0DJI8 122 aaPredicted RBP7.29□□□□□ -1.24
HMHB1-201ENST00000289448 RRASP10301 218 aa7.29□□□□□ -1.24
HMHB1-201ENST00000289448 PTHLHP12272 177 aa7.29□□□□□ -1.24
HMHB1-201ENST00000289448 PRSS3P35030 304 aa7.29□□□□□ -1.24
HMHB1-201ENST00000289448 BRWD1-AS2P59051 145 aa7.29□□□□□ -1.24
HMHB1-201ENST00000289448 CBX3Q13185 183 aa7.29□□□□□ -1.24
HMHB1-201ENST00000289448 EIF4EBP1Q13541 118 aaPredicted RBP7.29□□□□□ -1.24
HMHB1-201ENST00000289448 VMA21Q3ZAQ7 101 aa7.29□□□□□ -1.24
HMHB1-201ENST00000289448 RNASE12Q5GAN4 147 aaKnown RBP7.29□□□□□ -1.24
HMHB1-201ENST00000289448 OR2B11Q5JQS5 317 aa7.29□□□□□ -1.24
HMHB1-201ENST00000289448 C10orf55Q5SWW7 151 aa7.29□□□□□ -1.24
HMHB1-201ENST00000289448 PLET1Q6UQ28 207 aa7.29□□□□□ -1.24
HMHB1-201ENST00000289448 Q8N1Y9 231 aa7.29□□□□□ -1.24
HMHB1-201ENST00000289448 ZNF645Q8N7E2 425 aa7.29□□□□□ -1.24
HMHB1-201ENST00000289448 DUSP18Q8NEJ0 188 aa7.29□□□□□ -1.24
HMHB1-201ENST00000289448 TMEM68Q96MH6 324 aa7.29□□□□□ -1.24
HMHB1-201ENST00000289448 OR4C12Q96R67 309 aa7.29□□□□□ -1.24
HMHB1-201ENST00000289448 GPHA2Q96T91 129 aa7.29□□□□□ -1.24
HMHB1-201ENST00000289448 ZNF430Q9H8G1 570 aaPredicted RBP7.29□□□□□ -1.24
HMHB1-201ENST00000289448 RANGRFQ9HD47 186 aaPredicted RBP7.29□□□□□ -1.24
HMHB1-201ENST00000289448 TAS2R8Q9NYW2 309 aa7.29□□□□□ -1.24
HMHB1-201ENST00000289448 COPZ2Q9P299 210 aa7.29□□□□□ -1.24
HMHB1-201ENST00000289448 MTFP1Q9UDX5 166 aa7.29□□□□□ -1.24
HMHB1-201ENST00000289448 OR2W1Q9Y3N9 320 aa7.29□□□□□ -1.24
HMHB1-201ENST00000289448 STARD9Q9P2P6 4700 aa7.28□□□□□ -1.24
HMHB1-201ENST00000289448 A0A0G2JLM5 398 aa7.28□□□□□ -1.24
HMHB1-201ENST00000289448 ANKRD20A5PA0PJZ0 165 aa7.28□□□□□ -1.24
HMHB1-201ENST00000289448 TUSC2O75896 110 aa7.28□□□□□ -1.24
HMHB1-201ENST00000289448 IGLV1-51P01701 117 aa7.28□□□□□ -1.24
HMHB1-201ENST00000289448 ZP3P21754 424 aa7.28□□□□□ -1.24
HMHB1-201ENST00000289448 SYNJ2BPP57105 145 aa7.28□□□□□ -1.24
HMHB1-201ENST00000289448 ARL6IP1Q15041 203 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms