RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 GNG7O60262 68 aa14.95□□□□□ -0.02
PCDHA13-201ENST00000289272 SEC11AP67812 179 aa14.95□□□□□ -0.02
PCDHA13-201ENST00000289272 DLL3Q9NYJ7 618 aa14.95□□□□□ -0.02
PCDHA13-201ENST00000289272 MC5RP33032 325 aa14.95□□□□□ -0.02
PCDHA13-201ENST00000289272 CKS2P33552 79 aa14.95□□□□□ -0.02
PCDHA13-201ENST00000289272 NUBP1P53384 320 aa14.95□□□□□ -0.02
PCDHA13-201ENST00000289272 ZNF441Q8N8Z8 693 aa14.95□□□□□ -0.02
PCDHA13-201ENST00000289272 GOSR1O95249 250 aa14.95□□□□□ -0.02
PCDHA13-201ENST00000289272 FAM216AQ8WUB2 273 aa14.95□□□□□ -0.02
PCDHA13-201ENST00000289272 AGMATQ9BSE5 352 aa14.95□□□□□ -0.02
PCDHA13-201ENST00000289272 NRN1Q9NPD7 142 aa14.95□□□□□ -0.02
PCDHA13-201ENST00000289272 MARCH11A6NNE9 402 aa14.95□□□□□ -0.02
PCDHA13-201ENST00000289272 AMBPP02760 352 aa14.95□□□□□ -0.02
PCDHA13-201ENST00000289272 SRSF7Q16629 238 aaKnown RBP eCLIP14.95□□□□□ -0.02
PCDHA13-201ENST00000289272 ST20Q9HBF5 79 aa14.95□□□□□ -0.02
PCDHA13-201ENST00000289272 TMEM74BQ9NUR3 256 aa14.95□□□□□ -0.02
PCDHA13-201ENST00000289272 OR2H2O95918 312 aa14.94□□□□□ -0.02
PCDHA13-201ENST00000289272 FAM89BQ8N5H3 189 aa14.94□□□□□ -0.02
PCDHA13-201ENST00000289272 FZR1Q9UM11 496 aa14.94□□□□□ -0.02
PCDHA13-201ENST00000289272 IFNL4K9M1U5 179 aa14.94□□□□□ -0.02
PCDHA13-201ENST00000289272 CRYBB3P26998 211 aa14.94□□□□□ -0.02
PCDHA13-201ENST00000289272 C14orf144Q96I85 54 aa14.94□□□□□ -0.02
PCDHA13-201ENST00000289272 IL4P05112 153 aa14.94□□□□□ -0.02
PCDHA13-201ENST00000289272 PRNTQ86SH4 94 aa14.94□□□□□ -0.02
PCDHA13-201ENST00000289272 C1RLQ9NZP8 487 aa14.94□□□□□ -0.02
PCDHA13-201ENST00000289272 TMEM177Q53S58 311 aa14.94□□□□□ -0.02
PCDHA13-201ENST00000289272 ZSWIM8A7E2V4 1837 aa14.94□□□□□ -0.02
PCDHA13-201ENST00000289272 PRR33A8MZF0 331 aa14.94□□□□□ -0.02
PCDHA13-201ENST00000289272 ORAOV1Q8WV07 137 aa14.94□□□□□ -0.02
PCDHA13-201ENST00000289272 WNT5AP41221 380 aa14.93□□□□□ -0.02
PCDHA13-201ENST00000289272 HIST1H1AQ02539 215 aaPredicted RBP14.93□□□□□ -0.02
PCDHA13-201ENST00000289272 FOXL1Q12952 345 aa14.93□□□□□ -0.02
PCDHA13-201ENST00000289272 MS4A6AQ9H2W1 248 aa14.93□□□□□ -0.02
PCDHA13-201ENST00000289272 OSTCQ9NRP0 149 aa14.93□□□□□ -0.02
PCDHA13-201ENST00000289272 ZG16O60844 167 aa14.93□□□□□ -0.02
PCDHA13-201ENST00000289272 PSG9Q00887 426 aa14.93□□□□□ -0.02
PCDHA13-201ENST00000289272 CCL1P22362 96 aa14.93□□□□□ -0.02
PCDHA13-201ENST00000289272 RPL31P62899 125 aaKnown RBP14.93□□□□□ -0.02
PCDHA13-201ENST00000289272 C3AR1Q16581 482 aa14.93□□□□□ -0.02
PCDHA13-201ENST00000289272 ACSF3Q4G176 576 aaPredicted RBP14.93□□□□□ -0.02
PCDHA13-201ENST00000289272 SLC35B1P78383 322 aa14.93□□□□□ -0.02
PCDHA13-201ENST00000289272 NCOR1P1Q9H4R4 102 aa14.93□□□□□ -0.02
PCDHA13-201ENST00000289272 SERF1AO75920 110 aa14.92□□□□□ -0.02
PCDHA13-201ENST00000289272 FAM214BQ7L5A3 538 aa14.92□□□□□ -0.02
PCDHA13-201ENST00000289272 TCF23Q7RTU1 214 aa14.92□□□□□ -0.02
PCDHA13-201ENST00000289272 SLC25A10Q9UBX3 287 aaPredicted RBP14.92□□□□□ -0.02
PCDHA13-201ENST00000289272 TINAGQ9UJW2 476 aa14.92□□□□□ -0.02
PCDHA13-201ENST00000289272 SPCS1Q9Y6A9 102 aa14.92□□□□□ -0.02
PCDHA13-201ENST00000289272 GBF1Q92538 1859 aa14.92□□□□□ -0.02
PCDHA13-201ENST00000289272 F5H697 171 aa14.92□□□□□ -0.02
PCDHA13-201ENST00000289272 M0R3E3 92 aa14.92□□□□□ -0.02
PCDHA13-201ENST00000289272 CELA2AP08217 269 aa14.92□□□□□ -0.02
PCDHA13-201ENST00000289272 PTGDSP41222 190 aa14.92□□□□□ -0.02
PCDHA13-201ENST00000289272 NRN1LQ496H8 165 aa14.92□□□□□ -0.02
PCDHA13-201ENST00000289272 TBR1Q16650 682 aa14.92□□□□□ -0.02
PCDHA13-201ENST00000289272 PYY3Q5JQD4 70 aa14.92□□□□□ -0.02
PCDHA13-201ENST00000289272 RASL11AQ6T310 242 aa14.92□□□□□ -0.02
PCDHA13-201ENST00000289272 NABP2Q9BQ15 211 aa14.92□□□□□ -0.02
PCDHA13-201ENST00000289272 PGPA6NDG6 321 aa14.92□□□□□ -0.02
PCDHA13-201ENST00000289272 STPG3Q8N7X2 389 aa14.92□□□□□ -0.02
PCDHA13-201ENST00000289272 OR4D5Q8NGN0 318 aa14.92□□□□□ -0.02
PCDHA13-201ENST00000289272 RNASEH2CQ8TDP1 164 aaKnown RBP14.92□□□□□ -0.02
PCDHA13-201ENST00000289272 CASP8AP2Q9UKL3 1982 aa14.92□□□□□ -0.02
PCDHA13-201ENST00000289272 SLC17A3O00476 420 aa14.91□□□□□ -0.02
PCDHA13-201ENST00000289272 PRDX2P32119 198 aa14.91□□□□□ -0.02
PCDHA13-201ENST00000289272 LINC01559Q495D7 138 aa14.91□□□□□ -0.02
PCDHA13-201ENST00000289272 OR51G1Q8NGK1 321 aa14.91□□□□□ -0.02
PCDHA13-201ENST00000289272 ZNF414Q96IQ9 312 aa14.91□□□□□ -0.02
PCDHA13-201ENST00000289272 NDUFS8O00217 210 aa14.91□□□□□ -0.02
PCDHA13-201ENST00000289272 ZNF324O75467 553 aaPredicted RBP14.91□□□□□ -0.02
PCDHA13-201ENST00000289272 CFPP27918 469 aa14.91□□□□□ -0.02
PCDHA13-201ENST00000289272 GPR183P32249 361 aa14.91□□□□□ -0.02
PCDHA13-201ENST00000289272 TTC9CQ8N5M4 171 aa14.91□□□□□ -0.02
PCDHA13-201ENST00000289272 VWCEQ96DN2 955 aa14.91□□□□□ -0.02
PCDHA13-201ENST00000289272 TMEM140Q9NV12 185 aa14.91□□□□□ -0.02
PCDHA13-201ENST00000289272 AMMECR1LQ6DCA0 310 aa14.91□□□□□ -0.02
PCDHA13-201ENST00000289272 SPTBP11277 2137 aa14.91□□□□□ -0.02
PCDHA13-201ENST00000289272 LYPD3O95274 346 aa14.91□□□□□ -0.02
PCDHA13-201ENST00000289272 PGLYRP4Q96LB8 373 aa14.91□□□□□ -0.02
PCDHA13-201ENST00000289272 TRAV30A0A087WSZ9 112 aa14.9□□□□□ -0.02
PCDHA13-201ENST00000289272 CCL20P78556 96 aa14.9□□□□□ -0.02
PCDHA13-201ENST00000289272 ID3Q02535 119 aa14.9□□□□□ -0.02
PCDHA13-201ENST00000289272 CSRP2Q16527 193 aa14.9□□□□□ -0.02
PCDHA13-201ENST00000289272 PLPPR1Q8TBJ4 325 aa14.9□□□□□ -0.02
PCDHA13-201ENST00000289272 CHCHD1Q96BP2 118 aaKnown RBP14.9□□□□□ -0.02
PCDHA13-201ENST00000289272 GFI1Q99684 422 aa14.9□□□□□ -0.02
PCDHA13-201ENST00000289272 TCF19Q9Y242 345 aa14.9□□□□□ -0.02
PCDHA13-201ENST00000289272 CACNA1IQ9P0X4 2223 aa14.9□□□□□ -0.02
PCDHA13-201ENST00000289272 SPINK2P20155 84 aa14.9□□□□□ -0.02
PCDHA13-201ENST00000289272 C10orf91Q5T1B1 145 aa14.9□□□□□ -0.02
PCDHA13-201ENST00000289272 LHFPL1Q86WI0 220 aa14.9□□□□□ -0.02
PCDHA13-201ENST00000289272 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.9□□□□□ -0.02
PCDHA13-201ENST00000289272 HS3ST3B1Q9Y662 390 aa14.9□□□□□ -0.02
PCDHA13-201ENST00000289272 LOC107984156A0A0G2JMH3 177 aa14.9□□□□□ -0.02
PCDHA13-201ENST00000289272 A0A1W2PRS3 328 aa14.9□□□□□ -0.02
PCDHA13-201ENST00000289272 CCL21O00585 134 aa14.9□□□□□ -0.02
PCDHA13-201ENST00000289272 FXYD3Q14802 87 aa14.9□□□□□ -0.02
PCDHA13-201ENST00000289272 ARL17AQ8IVW1 177 aa14.9□□□□□ -0.02
PCDHA13-201ENST00000289272 SLC25A17O43808 307 aa14.9□□□□□ -0.02
PCDHA13-201ENST00000289272 IL6RP08887 468 aaPredicted RBP14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms