RNA–Protein interactions for RNA: ENST00000288398.10

TPM1-202, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-202ENST00000288398 RRP15Q9Y3B9 282 aaKnown RBP10.65□□□□□ -0.7
TPM1-202ENST00000288398 ZNF320A2RRD8 509 aa10.64□□□□□ -0.71
TPM1-202ENST00000288398 NPIPB5A8MRT5 1133 aa10.64□□□□□ -0.71
TPM1-202ENST00000288398 PPP5D1E7EU14 171 aa10.64□□□□□ -0.71
TPM1-202ENST00000288398 RBMXL2O75526 392 aaKnown RBP10.64□□□□□ -0.71
TPM1-202ENST00000288398 ARL3P36405 182 aa10.64□□□□□ -0.71
TPM1-202ENST00000288398 SSX9Q7RTT3 188 aa10.64□□□□□ -0.71
TPM1-202ENST00000288398 TMEM167AQ8TBQ9 72 aa10.64□□□□□ -0.71
TPM1-202ENST00000288398 THAP7Q9BT49 309 aaPredicted RBP10.64□□□□□ -0.71
TPM1-202ENST00000288398 HRASLSQ9HDD0 168 aa10.64□□□□□ -0.71
TPM1-202ENST00000288398 SLC2A9Q9NRM0 540 aa10.64□□□□□ -0.71
TPM1-202ENST00000288398 TXNL4BQ9NX01 149 aaKnown RBP10.64□□□□□ -0.71
TPM1-202ENST00000288398 TENM2Q9NT68 2774 aa10.63□□□□□ -0.71
TPM1-202ENST00000288398 C2orf70A6NJV1 201 aa10.63□□□□□ -0.71
TPM1-202ENST00000288398 OR11H12B2RN74 326 aa10.63□□□□□ -0.71
TPM1-202ENST00000288398 CYB5BO43169 146 aa10.63□□□□□ -0.71
TPM1-202ENST00000288398 OR2C1O95371 312 aa10.63□□□□□ -0.71
TPM1-202ENST00000288398 FOLR2P14207 255 aa10.63□□□□□ -0.71
TPM1-202ENST00000288398 FGF9P31371 208 aaPredicted RBP10.63□□□□□ -0.71
TPM1-202ENST00000288398 RPL30P62888 115 aaKnown RBP10.63□□□□□ -0.71
TPM1-202ENST00000288398 RPL8P62917 257 aaKnown RBP10.63□□□□□ -0.71
TPM1-202ENST00000288398 CATR1Q13166 79 aa10.63□□□□□ -0.71
TPM1-202ENST00000288398 OR4A47Q6IF82 309 aa10.63□□□□□ -0.71
TPM1-202ENST00000288398 SFXN4Q6P4A7 337 aa10.63□□□□□ -0.71
TPM1-202ENST00000288398 CLEC19AQ6UXS0 136 aa10.63□□□□□ -0.71
TPM1-202ENST00000288398 ADAMTSL5Q6ZMM2 481 aa10.63□□□□□ -0.71
TPM1-202ENST00000288398 MFSD4AQ8N468 514 aa10.63□□□□□ -0.71
TPM1-202ENST00000288398 LGALS14Q8TCE9 139 aa10.63□□□□□ -0.71
TPM1-202ENST00000288398 SECTM1Q8WVN6 248 aa10.63□□□□□ -0.71
TPM1-202ENST00000288398 SRD5A3Q9H8P0 318 aa10.63□□□□□ -0.71
TPM1-202ENST00000288398 RHBDL2Q9NX52 303 aa10.63□□□□□ -0.71
TPM1-202ENST00000288398 GAR1Q9NY12 217 aaKnown RBP10.63□□□□□ -0.71
TPM1-202ENST00000288398 IGKV1D-13A0A0B4J2D9 117 aa10.62□□□□□ -0.71
TPM1-202ENST00000288398 TEX22C9J3V5 150 aa10.62□□□□□ -0.71
TPM1-202ENST00000288398 LGALS9O00182 355 aa10.62□□□□□ -0.71
TPM1-202ENST00000288398 TNFSF12O43508 249 aa10.62□□□□□ -0.71
TPM1-202ENST00000288398 IGHV3-23P01764 117 aa10.62□□□□□ -0.71
TPM1-202ENST00000288398 HLA-AP01891 365 aaKnown RBP10.62□□□□□ -0.71
TPM1-202ENST00000288398 IGKV1-13P0DP09 117 aa10.62□□□□□ -0.71
TPM1-202ENST00000288398 DEFB114Q30KQ6 69 aa10.62□□□□□ -0.71
TPM1-202ENST00000288398 ANKRD55Q3KP44 614 aa10.62□□□□□ -0.71
TPM1-202ENST00000288398 UBE2UQ5VVX9 321 aa10.62□□□□□ -0.71
TPM1-202ENST00000288398 NR2C2APQ86WQ0 139 aa10.62□□□□□ -0.71
TPM1-202ENST00000288398 DEFB125Q8N687 156 aa10.62□□□□□ -0.71
TPM1-202ENST00000288398 BEST4Q8NFU0 473 aa10.62□□□□□ -0.71
TPM1-202ENST00000288398 OR4A5Q8NH83 315 aa10.62□□□□□ -0.71
TPM1-202ENST00000288398 CXorf58Q96LI9 332 aa10.62□□□□□ -0.71
TPM1-202ENST00000288398 FAM110AQ9BQ89 295 aa10.62□□□□□ -0.71
TPM1-202ENST00000288398 RETNQ9HD89 108 aa10.62□□□□□ -0.71
TPM1-202ENST00000288398 TRAV18A0A075B6X5 111 aa10.61□□□□□ -0.71
TPM1-202ENST00000288398 CD7P09564 240 aa10.61□□□□□ -0.71
TPM1-202ENST00000288398 ZNF735P0CB33 412 aa10.61□□□□□ -0.71
TPM1-202ENST00000288398 HLA-GP17693 338 aa10.61□□□□□ -0.71
TPM1-202ENST00000288398 PSMB6P28072 239 aa10.61□□□□□ -0.71
TPM1-202ENST00000288398 FCGR2CP31995 323 aa10.61□□□□□ -0.71
TPM1-202ENST00000288398 MECP2P51608 486 aaKnown RBP10.61□□□□□ -0.71
TPM1-202ENST00000288398 MXD1Q05195 221 aa10.61□□□□□ -0.71
TPM1-202ENST00000288398 ZNF57Q68EA5 555 aaPredicted RBP10.61□□□□□ -0.71
TPM1-202ENST00000288398 GPHB5Q86YW7 130 aa10.61□□□□□ -0.71
TPM1-202ENST00000288398 SPAG16Q8N0X2 631 aa10.61□□□□□ -0.71
TPM1-202ENST00000288398 PUSL1Q8N0Z8 303 aaKnown RBP10.61□□□□□ -0.71
TPM1-202ENST00000288398 ZBTB34Q8NCN2 500 aa10.61□□□□□ -0.71
TPM1-202ENST00000288398 OR52B4Q8NGK2 314 aa10.61□□□□□ -0.71
TPM1-202ENST00000288398 OR13F1Q8NGS4 319 aa10.61□□□□□ -0.71
TPM1-202ENST00000288398 COMMD5Q9GZQ3 224 aa10.61□□□□□ -0.71
TPM1-202ENST00000288398 HIPK2Q9H2X6 1198 aa10.61□□□□□ -0.71
TPM1-202ENST00000288398 DIABLOQ9NR28 239 aa10.61□□□□□ -0.71
TPM1-202ENST00000288398 THYN1Q9P016 225 aa10.61□□□□□ -0.71
TPM1-202ENST00000288398 ETV7Q9Y603 341 aa10.61□□□□□ -0.71
TPM1-202ENST00000288398 S4R3C0 116 aa10.61□□□□□ -0.71
TPM1-202ENST00000288398 DNAH7Q8WXX0 4024 aa10.61□□□□□ -0.71
TPM1-202ENST00000288398 TNCP24821 2201 aa10.6□□□□□ -0.71
TPM1-202ENST00000288398 TRBV7-1A0A0A6YYK4 115 aa10.6□□□□□ -0.71
TPM1-202ENST00000288398 ZNF785A8K8V0 405 aa10.6□□□□□ -0.71
TPM1-202ENST00000288398 SSX5O60225 188 aa10.6□□□□□ -0.71
TPM1-202ENST00000288398 NDUFB8O95169 186 aa10.6□□□□□ -0.71
TPM1-202ENST00000288398 IGLV2-14P01704 120 aa10.6□□□□□ -0.71
TPM1-202ENST00000288398 IL6RP08887 468 aaPredicted RBP10.6□□□□□ -0.71
TPM1-202ENST00000288398 AREGP15514 252 aa10.6□□□□□ -0.71
TPM1-202ENST00000288398 CBLN1P23435 193 aa10.6□□□□□ -0.71
TPM1-202ENST00000288398 SCAND1P57086 179 aa10.6□□□□□ -0.71
TPM1-202ENST00000288398 FXYD4P59646 89 aa10.6□□□□□ -0.71
TPM1-202ENST00000288398 MSMO1Q15800 293 aa10.6□□□□□ -0.71
TPM1-202ENST00000288398 IDNKQ5T6J7 187 aa10.6□□□□□ -0.71
TPM1-202ENST00000288398 C19orf35Q6ZS72 473 aa10.6□□□□□ -0.71
TPM1-202ENST00000288398 SPARTQ8N0X7 666 aa10.6□□□□□ -0.71
TPM1-202ENST00000288398 DMBX1Q8NFW5 382 aa10.6□□□□□ -0.71
TPM1-202ENST00000288398 BORCS5Q969J3 196 aa10.6□□□□□ -0.71
TPM1-202ENST00000288398 WDR89Q96FK6 387 aaPredicted RBP10.6□□□□□ -0.71
TPM1-202ENST00000288398 SLC5A7Q9GZV3 580 aa10.6□□□□□ -0.71
TPM1-202ENST00000288398 ZC4H2Q9NQZ6 224 aa10.6□□□□□ -0.71
TPM1-202ENST00000288398 CCL28Q9NRJ3 127 aa10.6□□□□□ -0.71
TPM1-202ENST00000288398 BET1LQ9NYM9 111 aa10.6□□□□□ -0.71
TPM1-202ENST00000288398 LOC100506127A0A0U1RQW1 187 aa10.59□□□□□ -0.71
TPM1-202ENST00000288398 REG1AP05451 166 aa10.59□□□□□ -0.71
TPM1-202ENST00000288398 CRYGCP07315 174 aa10.59□□□□□ -0.71
TPM1-202ENST00000288398 SDC2P34741 201 aa10.59□□□□□ -0.71
TPM1-202ENST00000288398 HERV-K104P61576 105 aa10.59□□□□□ -0.71
TPM1-202ENST00000288398 ERVK-16P61578 105 aa10.59□□□□□ -0.71
TPM1-202ENST00000288398 TIMM50Q3ZCQ8 353 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms