RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 OR2A4O95047 310 aa17.34■□□□□ 0.37
PDLIM3-203ENST00000284771 LSM10Q969L4 123 aaKnown RBP17.34■□□□□ 0.37
PDLIM3-203ENST00000284771 OR2A7Q96R45 310 aa17.34■□□□□ 0.37
PDLIM3-203ENST00000284771 BET1LQ9NYM9 111 aa17.34■□□□□ 0.37
PDLIM3-203ENST00000284771 PITPNC1Q9UKF7 332 aa17.34■□□□□ 0.37
PDLIM3-203ENST00000284771 DNAJC9-AS1A6NH13 148 aa17.33■□□□□ 0.37
PDLIM3-203ENST00000284771 C5orf64Q2M2E5 130 aa17.33■□□□□ 0.37
PDLIM3-203ENST00000284771 H2BFWTQ7Z2G1 175 aa17.33■□□□□ 0.37
PDLIM3-203ENST00000284771 TEX45Q8NA69 505 aa17.33■□□□□ 0.37
PDLIM3-203ENST00000284771 OR8H1Q8NGG4 311 aa17.33■□□□□ 0.37
PDLIM3-203ENST00000284771 RRNAD1Q96FB5 475 aaKnown RBP17.33■□□□□ 0.37
PDLIM3-203ENST00000284771 OR10C1Q96KK4 312 aa17.33■□□□□ 0.37
PDLIM3-203ENST00000284771 TMED3Q9Y3Q3 217 aa17.33■□□□□ 0.37
PDLIM3-203ENST00000284771 TET2Q6N021 2002 aaPredicted RBP17.33■□□□□ 0.36
PDLIM3-203ENST00000284771 DUXBA0A1W2PPF3 345 aa17.32■□□□□ 0.36
PDLIM3-203ENST00000284771 KBTBD11O94819 623 aa17.32■□□□□ 0.36
PDLIM3-203ENST00000284771 SPDEFO95238 335 aa17.32■□□□□ 0.36
PDLIM3-203ENST00000284771 CXCL3P19876 107 aa17.32■□□□□ 0.36
PDLIM3-203ENST00000284771 ERVK-16P61578 105 aa17.32■□□□□ 0.36
PDLIM3-203ENST00000284771 RELBQ01201 579 aa17.32■□□□□ 0.36
PDLIM3-203ENST00000284771 VMA21Q3ZAQ7 101 aa17.32■□□□□ 0.36
PDLIM3-203ENST00000284771 CADM3Q8N126 398 aa17.32■□□□□ 0.36
PDLIM3-203ENST00000284771 TMEM86BQ8N661 226 aa17.32■□□□□ 0.36
PDLIM3-203ENST00000284771 C5orf56Q8N8D9 126 aa17.32■□□□□ 0.36
PDLIM3-203ENST00000284771 AIFM2Q9BRQ8 373 aa17.32■□□□□ 0.36
PDLIM3-203ENST00000284771 RAB18Q9NP72 206 aa17.32■□□□□ 0.36
PDLIM3-203ENST00000284771 BTBD17A6NE02 478 aa17.32■□□□□ 0.36
PDLIM3-203ENST00000284771 SH2D7A6NKC9 451 aaPredicted RBP17.32■□□□□ 0.36
PDLIM3-203ENST00000284771 UPK2O00526 184 aa17.32■□□□□ 0.36
PDLIM3-203ENST00000284771 HLA-GP17693 338 aa17.32■□□□□ 0.36
PDLIM3-203ENST00000284771 HILS1P60008 231 aa17.32■□□□□ 0.36
PDLIM3-203ENST00000284771 SSBP2P81877 361 aaPredicted RBP17.32■□□□□ 0.36
PDLIM3-203ENST00000284771 PPP1R27Q86WC6 154 aa17.32■□□□□ 0.36
PDLIM3-203ENST00000284771 TMEM167AQ8TBQ9 72 aa17.32■□□□□ 0.36
PDLIM3-203ENST00000284771 CLCC1Q96S66 551 aa17.32■□□□□ 0.36
PDLIM3-203ENST00000284771 ZNF430Q9H8G1 570 aaPredicted RBP17.32■□□□□ 0.36
PDLIM3-203ENST00000284771 MOB4Q9Y3A3 225 aa17.32■□□□□ 0.36
PDLIM3-203ENST00000284771 hCG_2014768A0A024R1R8 64 aa17.31■□□□□ 0.36
PDLIM3-203ENST00000284771 ATG12O94817 140 aa17.31■□□□□ 0.36
PDLIM3-203ENST00000284771 SIX6O95475 246 aa17.31■□□□□ 0.36
PDLIM3-203ENST00000284771 MYOD1P15172 320 aa17.31■□□□□ 0.36
PDLIM3-203ENST00000284771 BLCAPP62952 87 aa17.31■□□□□ 0.36
PDLIM3-203ENST00000284771 FCN2Q15485 313 aa17.31■□□□□ 0.36
PDLIM3-203ENST00000284771 OR11H7Q8NGC8 314 aa17.31■□□□□ 0.36
PDLIM3-203ENST00000284771 ZNF418Q8TF45 676 aaPredicted RBP17.31■□□□□ 0.36
PDLIM3-203ENST00000284771 RANBP3Q9H6Z4 567 aaPredicted RBP17.31■□□□□ 0.36
PDLIM3-203ENST00000284771 C1RLQ9NZP8 487 aa17.31■□□□□ 0.36
PDLIM3-203ENST00000284771 KIAA1456Q9P272 454 aa17.31■□□□□ 0.36
PDLIM3-203ENST00000284771 H2BFSP57053 126 aa17.3■□□□□ 0.36
PDLIM3-203ENST00000284771 RRAS2P62070 204 aaPredicted RBP17.3■□□□□ 0.36
PDLIM3-203ENST00000284771 Q6ZS46 218 aa17.3■□□□□ 0.36
PDLIM3-203ENST00000284771 FAM219AQ8IW50 185 aa17.3■□□□□ 0.36
PDLIM3-203ENST00000284771 RNASE11Q8TAA1 199 aaKnown RBP17.3■□□□□ 0.36
PDLIM3-203ENST00000284771 VSTM2AQ8TAG5 236 aa17.3■□□□□ 0.36
PDLIM3-203ENST00000284771 WDR89Q96FK6 387 aaPredicted RBP17.3■□□□□ 0.36
PDLIM3-203ENST00000284771 MED28Q9H204 178 aa17.3■□□□□ 0.36
PDLIM3-203ENST00000284771 CACNG5Q9UF02 275 aa17.3■□□□□ 0.36
PDLIM3-203ENST00000284771 CLDN34H7C241 214 aa17.29■□□□□ 0.36
PDLIM3-203ENST00000284771 GOSR2O14653 212 aa17.29■□□□□ 0.36
PDLIM3-203ENST00000284771 FGF16O43320 207 aa17.29■□□□□ 0.36
PDLIM3-203ENST00000284771 PRSS8Q16651 343 aa17.29■□□□□ 0.36
PDLIM3-203ENST00000284771 C13orf42A0A1B0GVH6 325 aa17.29■□□□□ 0.36
PDLIM3-203ENST00000284771 E7EUB6 86 aa17.29■□□□□ 0.36
PDLIM3-203ENST00000284771 PITX3O75364 302 aa17.29■□□□□ 0.36
PDLIM3-203ENST00000284771 SULT1A3P0DMM9 295 aa17.29■□□□□ 0.36
PDLIM3-203ENST00000284771 SULT1A4P0DMN0 295 aa17.29■□□□□ 0.36
PDLIM3-203ENST00000284771 OR2B8PP59922 312 aa17.29■□□□□ 0.36
PDLIM3-203ENST00000284771 PLGLAQ15195 96 aa17.29■□□□□ 0.36
PDLIM3-203ENST00000284771 C16orf82Q7Z2V1 217 aa17.29■□□□□ 0.36
PDLIM3-203ENST00000284771 OR5M8Q8NGP6 311 aa17.29■□□□□ 0.36
PDLIM3-203ENST00000284771 JMJD1CQ15652 2540 aa17.28■□□□□ 0.36
PDLIM3-203ENST00000284771 PIGBOS1A0A0B4J2F0 54 aa17.28■□□□□ 0.36
PDLIM3-203ENST00000284771 FAM25EA8MYX2 175 aa17.28■□□□□ 0.36
PDLIM3-203ENST00000284771 GPR137BO60478 399 aa17.28■□□□□ 0.36
PDLIM3-203ENST00000284771 IFNA21P01568 189 aa17.28■□□□□ 0.36
PDLIM3-203ENST00000284771 RPL8P62917 257 aaKnown RBP17.28■□□□□ 0.36
PDLIM3-203ENST00000284771 OR4A5Q8NH83 315 aa17.28■□□□□ 0.36
PDLIM3-203ENST00000284771 RASL11BQ9BPW5 248 aa17.28■□□□□ 0.36
PDLIM3-203ENST00000284771 HSPB9Q9BQS6 159 aa17.28■□□□□ 0.36
PDLIM3-203ENST00000284771 TMEM14BQ9NUH8 114 aa17.28■□□□□ 0.36
PDLIM3-203ENST00000284771 MGAT4CQ9UBM8 478 aa17.28■□□□□ 0.36
PDLIM3-203ENST00000284771 A0A1B0GU03 582 aa17.27■□□□□ 0.36
PDLIM3-203ENST00000284771 LINC01548A6NM66 108 aa17.27■□□□□ 0.36
PDLIM3-203ENST00000284771 CA2P00918 260 aa17.27■□□□□ 0.36
PDLIM3-203ENST00000284771 C10orf55Q5SWW7 151 aa17.27■□□□□ 0.36
PDLIM3-203ENST00000284771 TAF15Q92804 592 aaKnown RBP eCLIP17.27■□□□□ 0.36
PDLIM3-203ENST00000284771 QTRT1Q9BXR0 403 aaKnown RBP17.27■□□□□ 0.36
PDLIM3-203ENST00000284771 IGHV7-81A0A0B4J1V7 117 aa17.26■□□□□ 0.35
PDLIM3-203ENST00000284771 C5orf51A6NDU8 294 aa17.26■□□□□ 0.35
PDLIM3-203ENST00000284771 C15orf61A6NNL5 157 aa17.26■□□□□ 0.35
PDLIM3-203ENST00000284771 HLA-DRB1P01911 266 aa17.26■□□□□ 0.35
PDLIM3-203ENST00000284771 OPN1MWP04001 364 aa17.26■□□□□ 0.35
PDLIM3-203ENST00000284771 OPN1MW2P0DN77 364 aa17.26■□□□□ 0.35
PDLIM3-203ENST00000284771 OPN1MW3P0DN78 364 aa17.26■□□□□ 0.35
PDLIM3-203ENST00000284771 SLC25A6P12236 298 aa17.26■□□□□ 0.35
PDLIM3-203ENST00000284771 IL15RAQ13261 267 aa17.26■□□□□ 0.35
PDLIM3-203ENST00000284771 SMCO1Q147U7 214 aa17.26■□□□□ 0.35
PDLIM3-203ENST00000284771 IAH1Q2TAA2 248 aaPredicted RBP17.26■□□□□ 0.35
PDLIM3-203ENST00000284771 CHAC2Q8WUX2 184 aa17.26■□□□□ 0.35
PDLIM3-203ENST00000284771 COA4Q9NYJ1 87 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms