RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 IGKV3-11P04433 115 aa14.04□□□□□ -0.16
SH3RF1-201ENST00000284637 MAS1LP35410 378 aa14.04□□□□□ -0.16
SH3RF1-201ENST00000284637 MRPL52Q86TS9 123 aaKnown RBP14.04□□□□□ -0.16
SH3RF1-201ENST00000284637 CALYQ9NYX4 217 aa14.04□□□□□ -0.16
SH3RF1-201ENST00000284637 CDX4O14627 284 aaPredicted RBP14.04□□□□□ -0.16
SH3RF1-201ENST00000284637 ICAM4Q14773 271 aa14.04□□□□□ -0.16
SH3RF1-201ENST00000284637 TMEM242Q9NWH2 141 aa14.04□□□□□ -0.16
SH3RF1-201ENST00000284637 TMEM229AB2RXF0 380 aa14.04□□□□□ -0.16
SH3RF1-201ENST00000284637 CXCL1P09341 107 aa14.04□□□□□ -0.16
SH3RF1-201ENST00000284637 SLC25A53Q5H9E4 307 aa14.04□□□□□ -0.16
SH3RF1-201ENST00000284637 GCSAMQ8N6F7 178 aa14.04□□□□□ -0.16
SH3RF1-201ENST00000284637 QSER1Q2KHR3 1735 aa14.03□□□□□ -0.16
SH3RF1-201ENST00000284637 SLC25A17O43808 307 aa14.03□□□□□ -0.16
SH3RF1-201ENST00000284637 IGHMP01871 453 aa14.03□□□□□ -0.16
SH3RF1-201ENST00000284637 NUDT10Q8NFP7 164 aa14.03□□□□□ -0.16
SH3RF1-201ENST00000284637 TDRD15B5MCY1 1934 aaKnown RBP14.03□□□□□ -0.16
SH3RF1-201ENST00000284637 COL24A1Q17RW2 1714 aa14.03□□□□□ -0.16
SH3RF1-201ENST00000284637 LOC107984156A0A0G2JMH3 177 aa14.03□□□□□ -0.16
SH3RF1-201ENST00000284637 A0A1W2PRS3 328 aa14.03□□□□□ -0.16
SH3RF1-201ENST00000284637 CGB1A6NKQ9 187 aa14.03□□□□□ -0.16
SH3RF1-201ENST00000284637 RRHO14718 337 aa14.03□□□□□ -0.16
SH3RF1-201ENST00000284637 ARL17AQ8IVW1 177 aa14.03□□□□□ -0.16
SH3RF1-201ENST00000284637 RTBDNQ9BSG5 229 aaPredicted RBP14.03□□□□□ -0.16
SH3RF1-201ENST00000284637 A0A087WV48 116 aa14.03□□□□□ -0.16
SH3RF1-201ENST00000284637 ERASQ7Z444 233 aa14.03□□□□□ -0.16
SH3RF1-201ENST00000284637 PRDM14Q9GZV8 571 aa14.03□□□□□ -0.16
SH3RF1-201ENST00000284637 AICDAQ9GZX7 198 aa14.03□□□□□ -0.16
SH3RF1-201ENST00000284637 OR4A5Q8NH83 315 aa14.02□□□□□ -0.16
SH3RF1-201ENST00000284637 CACNA1EQ15878 2313 aa14.02□□□□□ -0.16
SH3RF1-201ENST00000284637 H7C2G1 150 aa14.02□□□□□ -0.16
SH3RF1-201ENST00000284637 SERF1AO75920 110 aa14.02□□□□□ -0.16
SH3RF1-201ENST00000284637 MST1P26927 711 aa14.02□□□□□ -0.16
SH3RF1-201ENST00000284637 SRSF12Q8WXF0 261 aaKnown RBP14.02□□□□□ -0.16
SH3RF1-201ENST00000284637 CDX2Q99626 313 aaPredicted RBP14.02□□□□□ -0.16
SH3RF1-201ENST00000284637 TRAV9-1A0A075B6T8 112 aa14.02□□□□□ -0.17
SH3RF1-201ENST00000284637 ZNF658BQ4V348 819 aaPredicted RBP14.02□□□□□ -0.17
SH3RF1-201ENST00000284637 SAXO1Q8IYX7 474 aa14.02□□□□□ -0.17
SH3RF1-201ENST00000284637 NABP2Q9BQ15 211 aa14.02□□□□□ -0.17
SH3RF1-201ENST00000284637 TSPAN7P41732 249 aa14.02□□□□□ -0.17
SH3RF1-201ENST00000284637 REG1AP05451 166 aa14.01□□□□□ -0.17
SH3RF1-201ENST00000284637 SMIM13P0DJ93 91 aa14.01□□□□□ -0.17
SH3RF1-201ENST00000284637 KLF14Q8TD94 323 aaPredicted RBP14.01□□□□□ -0.17
SH3RF1-201ENST00000284637 IMMP2LQ96T52 175 aa14.01□□□□□ -0.17
SH3RF1-201ENST00000284637 AKIRIN1Q9H9L7 192 aaPredicted RBP14.01□□□□□ -0.17
SH3RF1-201ENST00000284637 NRN1Q9NPD7 142 aa14.01□□□□□ -0.17
SH3RF1-201ENST00000284637 ZDBF2Q9HCK1 2354 aa14.01□□□□□ -0.17
SH3RF1-201ENST00000284637 A1L4Q6 167 aa14.01□□□□□ -0.17
SH3RF1-201ENST00000284637 GDF9O60383 454 aa14.01□□□□□ -0.17
SH3RF1-201ENST00000284637 CEACAM1P13688 526 aa14.01□□□□□ -0.17
SH3RF1-201ENST00000284637 ADCYAP1P18509 176 aa14.01□□□□□ -0.17
SH3RF1-201ENST00000284637 MC5RP33032 325 aa14.01□□□□□ -0.17
SH3RF1-201ENST00000284637 GFRA1P56159 465 aa14.01□□□□□ -0.17
SH3RF1-201ENST00000284637 RPL23P62829 140 aaKnown RBP14.01□□□□□ -0.17
SH3RF1-201ENST00000284637 ZNF664Q8N3J9 261 aa14.01□□□□□ -0.17
SH3RF1-201ENST00000284637 IL36BQ9NZH7 164 aa14.01□□□□□ -0.17
SH3RF1-201ENST00000284637 CALHM1Q8IU99 346 aa14.01□□□□□ -0.17
SH3RF1-201ENST00000284637 STPG3Q8N7X2 389 aa14.01□□□□□ -0.17
SH3RF1-201ENST00000284637 MEGF9Q9H1U4 602 aa14.01□□□□□ -0.17
SH3RF1-201ENST00000284637 CENPWQ5EE01 88 aa14.01□□□□□ -0.17
SH3RF1-201ENST00000284637 F11RQ9Y624 299 aaKnown RBP14.01□□□□□ -0.17
SH3RF1-201ENST00000284637 SPCS1Q9Y6A9 102 aa14.01□□□□□ -0.17
SH3RF1-201ENST00000284637 LIPFP07098 398 aa14□□□□□ -0.17
SH3RF1-201ENST00000284637 GCHFRP30047 84 aa14□□□□□ -0.17
SH3RF1-201ENST00000284637 FCGR2BP31994 310 aaPredicted RBP14□□□□□ -0.17
SH3RF1-201ENST00000284637 C2orf83Q53S99 150 aa14□□□□□ -0.17
SH3RF1-201ENST00000284637 RTN4RQ9BZR6 473 aa14□□□□□ -0.17
SH3RF1-201ENST00000284637 TMEM78Q5T7P6 136 aa14□□□□□ -0.17
SH3RF1-201ENST00000284637 FOXA3P55318 350 aaPredicted RBP14□□□□□ -0.17
SH3RF1-201ENST00000284637 CDCP2Q5VXM1 449 aa14□□□□□ -0.17
SH3RF1-201ENST00000284637 C10orf128Q5T292 105 aa14□□□□□ -0.17
SH3RF1-201ENST00000284637 SCARF2Q96GP6 870 aaPredicted RBP14□□□□□ -0.17
SH3RF1-201ENST00000284637 KCNS1Q96KK3 526 aa14□□□□□ -0.17
SH3RF1-201ENST00000284637 TRBV6-7A0A0A0MS04 114 aa13.99□□□□□ -0.17
SH3RF1-201ENST00000284637 NPIPB13A6NJU9 1138 aa13.99□□□□□ -0.17
SH3RF1-201ENST00000284637 A8MWP6 167 aa13.99□□□□□ -0.17
SH3RF1-201ENST00000284637 NPIPB4C9JG80 1138 aa13.99□□□□□ -0.17
SH3RF1-201ENST00000284637 TGFBR3LH3BV60 316 aa13.99□□□□□ -0.17
SH3RF1-201ENST00000284637 SLC17A3O00476 420 aa13.99□□□□□ -0.17
SH3RF1-201ENST00000284637 GAS1P54826 345 aa13.99□□□□□ -0.17
SH3RF1-201ENST00000284637 RIPPLY3P57055 190 aa13.99□□□□□ -0.17
SH3RF1-201ENST00000284637 PMS2CLQ68D20 193 aa13.99□□□□□ -0.17
SH3RF1-201ENST00000284637 OR10AG1Q8NH19 301 aa13.99□□□□□ -0.17
SH3RF1-201ENST00000284637 UBTD1Q9HAC8 227 aa13.99□□□□□ -0.17
SH3RF1-201ENST00000284637 CYTL1Q9NRR1 136 aa13.99□□□□□ -0.17
SH3RF1-201ENST00000284637 PROB1E7EW31 1015 aa13.99□□□□□ -0.17
SH3RF1-201ENST00000284637 TIAF1O95411 115 aa13.99□□□□□ -0.17
SH3RF1-201ENST00000284637 TDGF1P3P51864 188 aa13.99□□□□□ -0.17
SH3RF1-201ENST00000284637 OR51G1Q8NGK1 321 aa13.99□□□□□ -0.17
SH3RF1-201ENST00000284637 ZNF646O15015 1829 aaPredicted RBP13.99□□□□□ -0.17
SH3RF1-201ENST00000284637 ARF6P62330 175 aa13.99□□□□□ -0.17
SH3RF1-201ENST00000284637 ZNF324BQ6AW86 544 aaPredicted RBP13.99□□□□□ -0.17
SH3RF1-201ENST00000284637 CCDC144NLQ6NUI1 221 aa13.99□□□□□ -0.17
SH3RF1-201ENST00000284637 NPIPB3Q92617 1050 aa13.99□□□□□ -0.17
SH3RF1-201ENST00000284637 JKAMPQ9P055 326 aa13.99□□□□□ -0.17
SH3RF1-201ENST00000284637 UBR3Q6ZT12 1888 aa13.99□□□□□ -0.17
SH3RF1-201ENST00000284637 SIGMAR1Q99720 223 aa13.99□□□□□ -0.17
SH3RF1-201ENST00000284637 IDI2-AS1Q9NZ38 188 aa13.99□□□□□ -0.17
SH3RF1-201ENST00000284637 COX6A1P12074 109 aa13.98□□□□□ -0.17
SH3RF1-201ENST00000284637 ZNF441Q8N8Z8 693 aa13.98□□□□□ -0.17
SH3RF1-201ENST00000284637 ZNF256Q9Y2P7 627 aaPredicted RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms