RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 SPRR3Q9UBC9 169 aa9.55□□□□□ -0.88
USP6NL-201ENST00000277575 IGKV1-9A0A0C4DH69 117 aa9.54□□□□□ -0.88
USP6NL-201ENST00000277575 AP4M1O00189 453 aa9.54□□□□□ -0.88
USP6NL-201ENST00000277575 F12P00748 615 aaPredicted RBP9.54□□□□□ -0.88
USP6NL-201ENST00000277575 REG1AP05451 166 aa9.54□□□□□ -0.88
USP6NL-201ENST00000277575 HIST1H1BP16401 226 aaKnown RBP9.54□□□□□ -0.88
USP6NL-201ENST00000277575 ID1P41134 155 aa9.54□□□□□ -0.88
USP6NL-201ENST00000277575 PRNTQ86SH4 94 aa9.54□□□□□ -0.88
USP6NL-201ENST00000277575 SMIM8Q96KF7 97 aa9.54□□□□□ -0.88
USP6NL-201ENST00000277575 CCL19Q99731 98 aa9.54□□□□□ -0.88
USP6NL-201ENST00000277575 IGHV3-48P01763 117 aa9.54□□□□□ -0.88
USP6NL-201ENST00000277575 TFPI2P48307 235 aa9.54□□□□□ -0.88
USP6NL-201ENST00000277575 NEU4Q8WWR8 484 aaPredicted RBP9.54□□□□□ -0.88
USP6NL-201ENST00000277575 RNASE6Q93091 150 aaKnown RBP9.54□□□□□ -0.88
USP6NL-201ENST00000277575 SEMA5BQ9P283 1151 aa9.54□□□□□ -0.88
USP6NL-201ENST00000277575 IGHV3OR16-10A0A075B7F0 116 aa9.54□□□□□ -0.88
USP6NL-201ENST00000277575 PQLC2LA1A4F0 135 aa9.54□□□□□ -0.88
USP6NL-201ENST00000277575 MFSD2BA6NFX1 497 aa9.54□□□□□ -0.88
USP6NL-201ENST00000277575 IER3P46695 156 aa9.54□□□□□ -0.88
USP6NL-201ENST00000277575 GALNT14Q96FL9 552 aa9.54□□□□□ -0.88
USP6NL-201ENST00000277575 DNAJC4Q9NNZ3 241 aa9.54□□□□□ -0.88
USP6NL-201ENST00000277575 DPM3Q9P2X0 92 aa9.54□□□□□ -0.88
USP6NL-201ENST00000277575 FUT9Q9Y231 359 aa9.54□□□□□ -0.88
USP6NL-201ENST00000277575 PGPA6NDG6 321 aa9.54□□□□□ -0.88
USP6NL-201ENST00000277575 SNURFLB1AK76 121 aa9.54□□□□□ -0.88
USP6NL-201ENST00000277575 MFAP2P55001 183 aa9.54□□□□□ -0.88
USP6NL-201ENST00000277575 FOXG1P55316 489 aaPredicted RBP9.54□□□□□ -0.88
USP6NL-201ENST00000277575 FXYD3Q14802 87 aa9.54□□□□□ -0.88
USP6NL-201ENST00000277575 HLA-DRB5Q30154 266 aa9.54□□□□□ -0.88
USP6NL-201ENST00000277575 OR10S1Q8NGN2 331 aa9.54□□□□□ -0.88
USP6NL-201ENST00000277575 METTL26Q96S19 204 aa9.54□□□□□ -0.88
USP6NL-201ENST00000277575 PARD6AQ9NPB6 346 aa9.54□□□□□ -0.88
USP6NL-201ENST00000277575 FNDC1Q4ZHG4 1894 aaPredicted RBP9.53□□□□□ -0.88
USP6NL-201ENST00000277575 IGKV3D-15A0A087WSY6 115 aa9.53□□□□□ -0.88
USP6NL-201ENST00000277575 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.53□□□□□ -0.88
USP6NL-201ENST00000277575 A0A1W2PS18 150 aa9.53□□□□□ -0.88
USP6NL-201ENST00000277575 BMPR1BO00238 502 aa9.53□□□□□ -0.88
USP6NL-201ENST00000277575 EIF3GO75821 320 aaKnown RBP eCLIP9.53□□□□□ -0.88
USP6NL-201ENST00000277575 PRSS1P07477 247 aa9.53□□□□□ -0.88
USP6NL-201ENST00000277575 FCGR2BP31994 310 aaPredicted RBP9.53□□□□□ -0.88
USP6NL-201ENST00000277575 PHF3Q92576 2039 aaKnown RBP9.53□□□□□ -0.88
USP6NL-201ENST00000277575 NPIPB3Q92617 1050 aa9.53□□□□□ -0.88
USP6NL-201ENST00000277575 KLHDC3Q9BQ90 382 aa9.53□□□□□ -0.88
USP6NL-201ENST00000277575 TM4SF5O14894 197 aa9.53□□□□□ -0.88
USP6NL-201ENST00000277575 UCP1P25874 307 aa9.53□□□□□ -0.88
USP6NL-201ENST00000277575 SLC16A13Q7RTY0 426 aa9.53□□□□□ -0.88
USP6NL-201ENST00000277575 GBGT1Q8N5D6 347 aa9.53□□□□□ -0.88
USP6NL-201ENST00000277575 KBTBD11-OT1A0A1B0GTJ5 212 aa9.53□□□□□ -0.88
USP6NL-201ENST00000277575 C8orf88P0DMB2 117 aa9.53□□□□□ -0.88
USP6NL-201ENST00000277575 TMEM78Q5T7P6 136 aa9.53□□□□□ -0.88
USP6NL-201ENST00000277575 ZCCHC24Q8N2G6 241 aaKnown RBP9.53□□□□□ -0.88
USP6NL-201ENST00000277575 STPG3Q8N7X2 389 aa9.53□□□□□ -0.88
USP6NL-201ENST00000277575 OSR1Q8TAX0 266 aaPredicted RBP9.53□□□□□ -0.88
USP6NL-201ENST00000277575 PLSCR2Q9NRY7 297 aa9.53□□□□□ -0.88
USP6NL-201ENST00000277575 A8MWL6 223 aa9.52□□□□□ -0.88
USP6NL-201ENST00000277575 HOXA4Q00056 320 aaPredicted RBP9.52□□□□□ -0.88
USP6NL-201ENST00000277575 ARTNQ5T4W7 220 aa9.52□□□□□ -0.88
USP6NL-201ENST00000277575 C19orf35Q6ZS72 473 aa9.52□□□□□ -0.88
USP6NL-201ENST00000277575 GGNQ86UU5 652 aa9.52□□□□□ -0.88
USP6NL-201ENST00000277575 BMPERQ8N8U9 685 aa9.52□□□□□ -0.88
USP6NL-201ENST00000277575 FGFBP3Q8TAT2 258 aa9.52□□□□□ -0.88
USP6NL-201ENST00000277575 C16orf92Q96LL3 132 aa9.52□□□□□ -0.88
USP6NL-201ENST00000277575 WDR81Q562E7 1941 aa9.52□□□□□ -0.88
USP6NL-201ENST00000277575 TEX50A0A1B0GTY4 177 aa9.52□□□□□ -0.89
USP6NL-201ENST00000277575 NPIPB11E5RHQ5 1161 aa9.52□□□□□ -0.89
USP6NL-201ENST00000277575 ISLRO14498 428 aa9.52□□□□□ -0.89
USP6NL-201ENST00000277575 HNRNPA3P51991 378 aaKnown RBP9.52□□□□□ -0.89
USP6NL-201ENST00000277575 ZNF146Q15072 292 aa9.52□□□□□ -0.89
USP6NL-201ENST00000277575 OR51G1Q8NGK1 321 aa9.52□□□□□ -0.89
USP6NL-201ENST00000277575 FBLN5Q9UBX5 448 aa9.52□□□□□ -0.89
USP6NL-201ENST00000277575 TRAV30A0A087WSZ9 112 aa9.52□□□□□ -0.89
USP6NL-201ENST00000277575 IGHV3-35A0A0C4DH35 117 aa9.52□□□□□ -0.89
USP6NL-201ENST00000277575 HSPB1P04792 205 aaKnown RBP9.52□□□□□ -0.89
USP6NL-201ENST00000277575 CCL1P22362 96 aa9.52□□□□□ -0.89
USP6NL-201ENST00000277575 ZNF137PP52743 207 aa9.52□□□□□ -0.89
USP6NL-201ENST00000277575 NCMAPQ5T1S8 102 aa9.52□□□□□ -0.89
USP6NL-201ENST00000277575 SPANXN1Q5VSR9 72 aa9.52□□□□□ -0.89
USP6NL-201ENST00000277575 LYZL4Q96KX0 146 aa9.52□□□□□ -0.89
USP6NL-201ENST00000277575 E9PLN8 166 aa9.52□□□□□ -0.89
USP6NL-201ENST00000277575 J3QRE1 110 aa9.52□□□□□ -0.89
USP6NL-201ENST00000277575 CD8AP01732 235 aa9.52□□□□□ -0.89
USP6NL-201ENST00000277575 ATP5IP56385 69 aaPredicted RBP9.52□□□□□ -0.89
USP6NL-201ENST00000277575 EFNB1P98172 346 aa9.52□□□□□ -0.89
USP6NL-201ENST00000277575 MEF2CQ06413 473 aaPredicted RBP9.52□□□□□ -0.89
USP6NL-201ENST00000277575 FOXF2Q12947 444 aa9.52□□□□□ -0.89
USP6NL-201ENST00000277575 LY6DQ14210 128 aa9.52□□□□□ -0.89
USP6NL-201ENST00000277575 GUCA2BQ16661 112 aa9.52□□□□□ -0.89
USP6NL-201ENST00000277575 FAM90A1Q86YD7 464 aa9.52□□□□□ -0.89
USP6NL-201ENST00000277575 VKORC1Q9BQB6 163 aa9.52□□□□□ -0.89
USP6NL-201ENST00000277575 MRPL37Q9BZE1 423 aaKnown RBP9.52□□□□□ -0.89
USP6NL-201ENST00000277575 C17orf98A8MV24 154 aa9.51□□□□□ -0.89
USP6NL-201ENST00000277575 M0R2Z0 102 aa9.51□□□□□ -0.89
USP6NL-201ENST00000277575 CCKARP32238 428 aa9.51□□□□□ -0.89
USP6NL-201ENST00000277575 LCN2P80188 198 aa9.51□□□□□ -0.89
USP6NL-201ENST00000277575 TMEM116Q8NCL8 245 aa9.51□□□□□ -0.89
USP6NL-201ENST00000277575 DOCK9Q9BZ29 2069 aa9.51□□□□□ -0.89
USP6NL-201ENST00000277575 SSBP3Q9BWW4 388 aaPredicted RBP9.51□□□□□ -0.89
USP6NL-201ENST00000277575 TMEM56-RWDD3S4R434 201 aa9.51□□□□□ -0.89
USP6NL-201ENST00000277575 Q0VFX4 171 aa9.51□□□□□ -0.89
USP6NL-201ENST00000277575 TM4SF20Q53R12 229 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms