RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 SFT2D1Q8WV19 159 aa7.81□□□□□ -1.16
TRIM55-201ENST00000276573 NABP2Q9BQ15 211 aa7.81□□□□□ -1.16
TRIM55-201ENST00000276573 NKX6-2Q9C056 277 aaPredicted RBP7.81□□□□□ -1.16
TRIM55-201ENST00000276573 TMEM133Q9H2Q1 129 aa7.81□□□□□ -1.16
TRIM55-201ENST00000276573 VSIRQ9H7M9 311 aa7.81□□□□□ -1.16
TRIM55-201ENST00000276573 MIOXQ9UGB7 285 aa7.81□□□□□ -1.16
TRIM55-201ENST00000276573 TMA7Q9Y2S6 64 aaKnown RBP7.81□□□□□ -1.16
TRIM55-201ENST00000276573 TRAV1-1A0A0B4J248 108 aa7.8□□□□□ -1.16
TRIM55-201ENST00000276573 H0YJW9 148 aa7.8□□□□□ -1.16
TRIM55-201ENST00000276573 RRHO14718 337 aa7.8□□□□□ -1.16
TRIM55-201ENST00000276573 LY6HO94772 140 aa7.8□□□□□ -1.16
TRIM55-201ENST00000276573 HBE1P02100 147 aa7.8□□□□□ -1.16
TRIM55-201ENST00000276573 APOA2P02652 100 aa7.8□□□□□ -1.16
TRIM55-201ENST00000276573 ZNF137PP52743 207 aa7.8□□□□□ -1.16
TRIM55-201ENST00000276573 TMEM177Q53S58 311 aa7.8□□□□□ -1.16
TRIM55-201ENST00000276573 DTX2Q86UW9 622 aa7.8□□□□□ -1.16
TRIM55-201ENST00000276573 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.8□□□□□ -1.16
TRIM55-201ENST00000276573 OSR1Q8TAX0 266 aaPredicted RBP7.8□□□□□ -1.16
TRIM55-201ENST00000276573 MBD3L1Q8WWY6 194 aa7.8□□□□□ -1.16
TRIM55-201ENST00000276573 RAB1CQ92928 201 aa7.8□□□□□ -1.16
TRIM55-201ENST00000276573 LHX4Q969G2 390 aa7.8□□□□□ -1.16
TRIM55-201ENST00000276573 SMDT1Q9H4I9 107 aa7.8□□□□□ -1.16
TRIM55-201ENST00000276573 PRNDQ9UKY0 176 aa7.8□□□□□ -1.16
TRIM55-201ENST00000276573 OR51B2Q9Y5P1 312 aa7.8□□□□□ -1.16
TRIM55-201ENST00000276573 RBFOX3A6NFN3 312 aa7.8□□□□□ -1.16
TRIM55-201ENST00000276573 H7C2Y5 167 aa7.8□□□□□ -1.16
TRIM55-201ENST00000276573 DNASE2O00115 360 aaPredicted RBP7.8□□□□□ -1.16
TRIM55-201ENST00000276573 KBTBD11O94819 623 aa7.8□□□□□ -1.16
TRIM55-201ENST00000276573 F12P00748 615 aaPredicted RBP7.8□□□□□ -1.16
TRIM55-201ENST00000276573 FGF7P21781 194 aa7.8□□□□□ -1.16
TRIM55-201ENST00000276573 REG1BP48304 166 aa7.8□□□□□ -1.16
TRIM55-201ENST00000276573 RAB2AP61019 212 aa7.8□□□□□ -1.16
TRIM55-201ENST00000276573 DIAPH2-AS1Q14236 149 aa7.8□□□□□ -1.16
TRIM55-201ENST00000276573 TMEM41BQ5BJD5 291 aa7.8□□□□□ -1.16
TRIM55-201ENST00000276573 WDR25Q64LD2 544 aaPredicted RBP7.8□□□□□ -1.16
TRIM55-201ENST00000276573 ETV3LQ6ZN32 361 aa7.8□□□□□ -1.16
TRIM55-201ENST00000276573 OR8B3Q8NGG8 313 aa7.8□□□□□ -1.16
TRIM55-201ENST00000276573 C8orf46Q8TAG6 207 aa7.8□□□□□ -1.16
TRIM55-201ENST00000276573 NEIL1Q96FI4 390 aaPredicted RBP7.8□□□□□ -1.16
TRIM55-201ENST00000276573 OR8B2Q96RD0 313 aa7.8□□□□□ -1.16
TRIM55-201ENST00000276573 RARRES2Q99969 163 aa7.8□□□□□ -1.16
TRIM55-201ENST00000276573 BET1LQ9NYM9 111 aa7.8□□□□□ -1.16
TRIM55-201ENST00000276573 KIAA1456Q9P272 454 aa7.8□□□□□ -1.16
TRIM55-201ENST00000276573 ZNF257Q9Y2Q1 563 aa7.8□□□□□ -1.16
TRIM55-201ENST00000276573 DOCK11Q5JSL3 2073 aa7.79□□□□□ -1.16
TRIM55-201ENST00000276573 CHD8Q9HCK8 2581 aa7.79□□□□□ -1.16
TRIM55-201ENST00000276573 PPIAL4CA0A0B4J2A2 164 aa7.79□□□□□ -1.16
TRIM55-201ENST00000276573 A0A1W2PPH5 198 aa7.79□□□□□ -1.16
TRIM55-201ENST00000276573 A0A1W2PPR1 153 aa7.79□□□□□ -1.16
TRIM55-201ENST00000276573 SNAPINO95295 136 aa7.79□□□□□ -1.16
TRIM55-201ENST00000276573 PPIAL4GP0DN37 164 aa7.79□□□□□ -1.16
TRIM55-201ENST00000276573 MYOD1P15172 320 aa7.79□□□□□ -1.16
TRIM55-201ENST00000276573 HOXA1P49639 335 aaPredicted RBP7.79□□□□□ -1.16
TRIM55-201ENST00000276573 PPT1P50897 306 aa7.79□□□□□ -1.16
TRIM55-201ENST00000276573 PRRX1P54821 245 aa7.79□□□□□ -1.16
TRIM55-201ENST00000276573 RAB11AP62491 216 aa7.79□□□□□ -1.16
TRIM55-201ENST00000276573 ZNF726P1Q15940 193 aa7.79□□□□□ -1.16
TRIM55-201ENST00000276573 ADGRG4Q8IZF6 3080 aa7.79□□□□□ -1.16
TRIM55-201ENST00000276573 TMEM170AQ8WVE7 144 aa7.79□□□□□ -1.16
TRIM55-201ENST00000276573 FLYWCH2Q96CP2 140 aaKnown RBP7.79□□□□□ -1.16
TRIM55-201ENST00000276573 TIMD4Q96H15 378 aa7.79□□□□□ -1.16
TRIM55-201ENST00000276573 GGACTQ9BVM4 153 aa7.79□□□□□ -1.16
TRIM55-201ENST00000276573 FKBP11Q9NYL4 201 aa7.79□□□□□ -1.16
TRIM55-201ENST00000276573 KPTNQ9Y664 436 aa7.79□□□□□ -1.16
TRIM55-201ENST00000276573 KALRNO60229 2985 aa7.79□□□□□ -1.16
TRIM55-201ENST00000276573 COL6A6A6NMZ7 2263 aa7.79□□□□□ -1.16
TRIM55-201ENST00000276573 TEX50A0A1B0GTY4 177 aa7.79□□□□□ -1.16
TRIM55-201ENST00000276573 PRSS46E5RG02 174 aa7.79□□□□□ -1.16
TRIM55-201ENST00000276573 RBP4P02753 201 aa7.79□□□□□ -1.16
TRIM55-201ENST00000276573 SAA1P0DJI8 122 aaPredicted RBP7.79□□□□□ -1.16
TRIM55-201ENST00000276573 IL3RAP26951 378 aa7.79□□□□□ -1.16
TRIM55-201ENST00000276573 CD1BP29016 333 aa7.79□□□□□ -1.16
TRIM55-201ENST00000276573 TGIF2LXQ8IUE1 241 aa7.79□□□□□ -1.16
TRIM55-201ENST00000276573 LY6G5BQ8NDX9 201 aa7.79□□□□□ -1.16
TRIM55-201ENST00000276573 TNFRSF14Q92956 283 aa7.79□□□□□ -1.16
TRIM55-201ENST00000276573 PCGF1Q9BSM1 259 aa7.79□□□□□ -1.16
TRIM55-201ENST00000276573 SLC35B3Q9H1N7 401 aa7.79□□□□□ -1.16
TRIM55-201ENST00000276573 ENY2Q9NPA8 101 aa7.79□□□□□ -1.16
TRIM55-201ENST00000276573 WDR83OSQ9Y284 106 aa7.79□□□□□ -1.16
TRIM55-201ENST00000276573 TET2Q6N021 2002 aaPredicted RBP7.78□□□□□ -1.16
TRIM55-201ENST00000276573 FAM74A7A6NL05 159 aa7.78□□□□□ -1.16
TRIM55-201ENST00000276573 C19orf84I3L1E1 186 aa7.78□□□□□ -1.16
TRIM55-201ENST00000276573 IGLV1-47P01700 117 aa7.78□□□□□ -1.16
TRIM55-201ENST00000276573 MC5RP33032 325 aa7.78□□□□□ -1.16
TRIM55-201ENST00000276573 NPBWR1P48145 328 aa7.78□□□□□ -1.16
TRIM55-201ENST00000276573 ELLP55199 621 aaPredicted RBP7.78□□□□□ -1.16
TRIM55-201ENST00000276573 DLK1P80370 383 aa7.78□□□□□ -1.16
TRIM55-201ENST00000276573 HNF4GQ14541 408 aa7.78□□□□□ -1.16
TRIM55-201ENST00000276573 FAM74A3Q4VXF1 159 aa7.78□□□□□ -1.16
TRIM55-201ENST00000276573 ACSM6Q6P461 480 aa7.78□□□□□ -1.16
TRIM55-201ENST00000276573 PDPNQ86YL7 162 aa7.78□□□□□ -1.16
TRIM55-201ENST00000276573 RPP25LQ8N5L8 163 aaKnown RBP7.78□□□□□ -1.16
TRIM55-201ENST00000276573 ZNF709Q8N972 641 aa7.78□□□□□ -1.16
TRIM55-201ENST00000276573 OR4C13Q8NGP0 309 aa7.78□□□□□ -1.16
TRIM55-201ENST00000276573 RCC1LQ96I51 464 aaKnown RBP7.78□□□□□ -1.16
TRIM55-201ENST00000276573 HARBI1Q96MB7 349 aa7.78□□□□□ -1.16
TRIM55-201ENST00000276573 NPCDR1Q9BY65 106 aa7.78□□□□□ -1.16
TRIM55-201ENST00000276573 CHODLQ9H9P2 273 aa7.78□□□□□ -1.16
TRIM55-201ENST00000276573 PATZ1Q9HBE1 687 aaKnown RBP7.78□□□□□ -1.16
TRIM55-201ENST00000276573 SLC39A9Q9NUM3 307 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms