RNA–Protein interactions for RNA: ENST00000273064.10

CNOT9-201, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT9, Length 4,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-201ENST00000273064 NAPSAO96009 420 aa12.24□□□□□ -0.45
CNOT9-201ENST00000273064 FXYD3Q14802 87 aa12.24□□□□□ -0.45
CNOT9-201ENST00000273064 ATP6V1FQ16864 119 aa12.24□□□□□ -0.45
CNOT9-201ENST00000273064 ZNF324BQ6AW86 544 aaPredicted RBP12.24□□□□□ -0.45
CNOT9-201ENST00000273064 TRAT1Q6PIZ9 186 aa12.24□□□□□ -0.45
CNOT9-201ENST00000273064 LINC00518Q8N0U6 118 aa12.24□□□□□ -0.45
CNOT9-201ENST00000273064 CORO2AQ92828 525 aa12.24□□□□□ -0.45
CNOT9-201ENST00000273064 POM121Q96HA1 1249 aa12.24□□□□□ -0.45
CNOT9-201ENST00000273064 BTF3L4Q96K17 158 aa12.24□□□□□ -0.45
CNOT9-201ENST00000273064 MEGF10Q96KG7 1140 aa12.24□□□□□ -0.45
CNOT9-201ENST00000273064 IFT22Q9H7X7 185 aa12.24□□□□□ -0.45
CNOT9-201ENST00000273064 SRD5A3Q9H8P0 318 aa12.24□□□□□ -0.45
CNOT9-201ENST00000273064 PLSCR2Q9NRY7 297 aa12.24□□□□□ -0.45
CNOT9-201ENST00000273064 DUXBA0A1W2PPF3 345 aa12.24□□□□□ -0.45
CNOT9-201ENST00000273064 ETV2O00321 342 aaPredicted RBP12.24□□□□□ -0.45
CNOT9-201ENST00000273064 SLC25A5P05141 298 aaKnown RBP12.24□□□□□ -0.45
CNOT9-201ENST00000273064 TMEM56Q96MV1 263 aa12.24□□□□□ -0.45
CNOT9-201ENST00000273064 PARLQ9H300 379 aa12.24□□□□□ -0.45
CNOT9-201ENST00000273064 TMEM56-RWDD3S4R434 201 aa12.24□□□□□ -0.45
CNOT9-201ENST00000273064 ARL14EPLP0DKL9 152 aa12.23□□□□□ -0.45
CNOT9-201ENST00000273064 CD24P25063 80 aa12.23□□□□□ -0.45
CNOT9-201ENST00000273064 IER3P46695 156 aa12.23□□□□□ -0.45
CNOT9-201ENST00000273064 OR4D5Q8NGN0 318 aa12.23□□□□□ -0.45
CNOT9-201ENST00000273064 OR4X1Q8NH49 305 aa12.23□□□□□ -0.45
CNOT9-201ENST00000273064 IGKV3-7A0A075B6H7 116 aa12.23□□□□□ -0.45
CNOT9-201ENST00000273064 IGKV1-5P01602 117 aa12.23□□□□□ -0.45
CNOT9-201ENST00000273064 MPZP25189 248 aa12.23□□□□□ -0.45
CNOT9-201ENST00000273064 DHRS7BQ6IAN0 325 aaPredicted RBP12.23□□□□□ -0.45
CNOT9-201ENST00000273064 K7N7A8 449 aa12.23□□□□□ -0.45
CNOT9-201ENST00000273064 SRP19P09132 144 aaKnown RBP12.23□□□□□ -0.45
CNOT9-201ENST00000273064 ZNF383Q8NA42 475 aa12.23□□□□□ -0.45
CNOT9-201ENST00000273064 OR10G8Q8NGN5 311 aa12.23□□□□□ -0.45
CNOT9-201ENST00000273064 IGHV1-18A0A0C4DH31 117 aa12.22□□□□□ -0.45
CNOT9-201ENST00000273064 FOSL1P15407 271 aa12.22□□□□□ -0.45
CNOT9-201ENST00000273064 TOMM20LQ6UXN7 152 aa12.22□□□□□ -0.45
CNOT9-201ENST00000273064 DNM1P46Q6ZS02 220 aa12.22□□□□□ -0.45
CNOT9-201ENST00000273064 EIF4E3Q8N5X7 224 aaKnown RBP12.22□□□□□ -0.45
CNOT9-201ENST00000273064 ZNF525Q8N782 197 aa12.22□□□□□ -0.45
CNOT9-201ENST00000273064 TMEM18Q96B42 140 aa12.22□□□□□ -0.45
CNOT9-201ENST00000273064 DCAF16Q9NXF7 216 aa12.22□□□□□ -0.45
CNOT9-201ENST00000273064 CARHSP1Q9Y2V2 147 aaKnown RBP12.22□□□□□ -0.45
CNOT9-201ENST00000273064 MLNRO43193 412 aa12.22□□□□□ -0.45
CNOT9-201ENST00000273064 SNRNP40Q96DI7 357 aaKnown RBP12.22□□□□□ -0.45
CNOT9-201ENST00000273064 EAF1Q96JC9 268 aaPredicted RBP12.22□□□□□ -0.45
CNOT9-201ENST00000273064 PACRGQ96M98 296 aaPredicted RBP12.22□□□□□ -0.45
CNOT9-201ENST00000273064 MRPL37Q9BZE1 423 aaKnown RBP12.22□□□□□ -0.45
CNOT9-201ENST00000273064 NPVFQ9HCQ7 196 aa12.22□□□□□ -0.45
CNOT9-201ENST00000273064 IGHV3OR16-8A0A075B7F1 116 aa12.22□□□□□ -0.45
CNOT9-201ENST00000273064 C1QTNF9BB2RNN3 333 aa12.22□□□□□ -0.45
CNOT9-201ENST00000273064 ARF6P62330 175 aa12.22□□□□□ -0.45
CNOT9-201ENST00000273064 ZBTB34Q8NCN2 500 aa12.22□□□□□ -0.45
CNOT9-201ENST00000273064 CISD1Q9NZ45 108 aaKnown RBP12.22□□□□□ -0.45
CNOT9-201ENST00000273064 ATP5G3P48201 142 aa12.22□□□□□ -0.45
CNOT9-201ENST00000273064 DLX1P56177 255 aa12.22□□□□□ -0.45
CNOT9-201ENST00000273064 ARL16Q0P5N6 197 aa12.22□□□□□ -0.45
CNOT9-201ENST00000273064 ZNF497Q6ZNH5 498 aa12.22□□□□□ -0.45
CNOT9-201ENST00000273064 OR1L4Q8NGR5 311 aa12.22□□□□□ -0.45
CNOT9-201ENST00000273064 COL6A3P12111 3177 aa12.21□□□□□ -0.45
CNOT9-201ENST00000273064 CSN3P07498 182 aa12.21□□□□□ -0.45
CNOT9-201ENST00000273064 KIR3DL3Q8N743 410 aa12.21□□□□□ -0.45
CNOT9-201ENST00000273064 LILRB1Q8NHL6 650 aaPredicted RBP12.21□□□□□ -0.45
CNOT9-201ENST00000273064 HIF1ANQ9NWT6 349 aa12.21□□□□□ -0.45
CNOT9-201ENST00000273064 SERTM2A0A1B0GWG4 89 aa12.21□□□□□ -0.46
CNOT9-201ENST00000273064 GRIFINA4D1Z8 144 aa12.21□□□□□ -0.46
CNOT9-201ENST00000273064 WT1P19544 449 aaPredicted RBP12.21□□□□□ -0.46
CNOT9-201ENST00000273064 CD82P27701 267 aa12.21□□□□□ -0.46
CNOT9-201ENST00000273064 SPCS3P61009 180 aa12.21□□□□□ -0.46
CNOT9-201ENST00000273064 MST1LQ2TV78 715 aa12.21□□□□□ -0.46
CNOT9-201ENST00000273064 MDS2Q8NDY4 140 aa12.21□□□□□ -0.46
CNOT9-201ENST00000273064 TRAV3A0A0B4J244 114 aa12.21□□□□□ -0.46
CNOT9-201ENST00000273064 A0A1W2PNU3 283 aaPredicted RBP12.21□□□□□ -0.46
CNOT9-201ENST00000273064 TRGC1P0CF51 173 aa12.21□□□□□ -0.46
CNOT9-201ENST00000273064 GLRXP35754 106 aa12.21□□□□□ -0.46
CNOT9-201ENST00000273064 RPL29P47914 159 aaKnown RBP12.21□□□□□ -0.46
CNOT9-201ENST00000273064 CNN1P51911 297 aaKnown RBP12.21□□□□□ -0.46
CNOT9-201ENST00000273064 PNRC1Q12796 327 aaPredicted RBP12.21□□□□□ -0.46
CNOT9-201ENST00000273064 MMDQ15546 238 aa12.21□□□□□ -0.46
CNOT9-201ENST00000273064 SLC35E4Q6ICL7 350 aa12.21□□□□□ -0.46
CNOT9-201ENST00000273064 ZNF714Q96N38 554 aa12.21□□□□□ -0.46
CNOT9-201ENST00000273064 TXN2Q99757 166 aa12.21□□□□□ -0.46
CNOT9-201ENST00000273064 TNFRSF19Q9NS68 423 aa12.21□□□□□ -0.46
CNOT9-201ENST00000273064 MRPS18CQ9Y3D5 142 aaKnown RBP12.21□□□□□ -0.46
CNOT9-201ENST00000273064 BSPH1Q075Z2 132 aa12.2□□□□□ -0.46
CNOT9-201ENST00000273064 BORCS7Q96B45 105 aa12.2□□□□□ -0.46
CNOT9-201ENST00000273064 MS4A10Q96PG2 267 aa12.2□□□□□ -0.46
CNOT9-201ENST00000273064 SCNM1Q9BWG6 230 aa12.2□□□□□ -0.46
CNOT9-201ENST00000273064 TMSB15BA0A087X1C1 80 aa12.2□□□□□ -0.46
CNOT9-201ENST00000273064 IQCF6A8MYZ5 107 aa12.2□□□□□ -0.46
CNOT9-201ENST00000273064 CA2P00918 260 aa12.2□□□□□ -0.46
CNOT9-201ENST00000273064 CD40P25942 277 aa12.2□□□□□ -0.46
CNOT9-201ENST00000273064 CRYBB3P26998 211 aa12.2□□□□□ -0.46
CNOT9-201ENST00000273064 SPSB4Q96A44 273 aa12.2□□□□□ -0.46
CNOT9-201ENST00000273064 SLC45A2Q9UMX9 530 aa12.2□□□□□ -0.46
CNOT9-201ENST00000273064 HELTA6NFD8 242 aa12.2□□□□□ -0.46
CNOT9-201ENST00000273064 Q8WTZ3 238 aa12.2□□□□□ -0.46
CNOT9-201ENST00000273064 LSM10Q969L4 123 aaKnown RBP12.2□□□□□ -0.46
CNOT9-201ENST00000273064 PARD6AQ9NPB6 346 aa12.2□□□□□ -0.46
CNOT9-201ENST00000273064 SLC17A3O00476 420 aa12.19□□□□□ -0.46
CNOT9-201ENST00000273064 NRN1LQ496H8 165 aa12.19□□□□□ -0.46
CNOT9-201ENST00000273064 SIGLECL1Q8N7X8 197 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms