RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 TMEM133Q9H2Q1 129 aa19.88■□□□□ 0.77
SSBP4-201ENST00000270061 ZC4H2Q9NQZ6 224 aa19.88■□□□□ 0.77
SSBP4-201ENST00000270061 WRBO00258 174 aa19.87■□□□□ 0.77
SSBP4-201ENST00000270061 SSSCA1O60232 199 aa19.87■□□□□ 0.77
SSBP4-201ENST00000270061 SPDEFO95238 335 aa19.87■□□□□ 0.77
SSBP4-201ENST00000270061 ZNF137PP52743 207 aa19.87■□□□□ 0.77
SSBP4-201ENST00000270061 H2BFWTQ7Z2G1 175 aa19.87■□□□□ 0.77
SSBP4-201ENST00000270061 OR2C3Q8N628 320 aa19.87■□□□□ 0.77
SSBP4-201ENST00000270061 TNFRSF14Q92956 283 aa19.87■□□□□ 0.77
SSBP4-201ENST00000270061 R3HDM4Q96D70 268 aa19.87■□□□□ 0.77
SSBP4-201ENST00000270061 RAB40CQ96S21 281 aa19.87■□□□□ 0.77
SSBP4-201ENST00000270061 MAGT1Q9H0U3 335 aa19.87■□□□□ 0.77
SSBP4-201ENST00000270061 MARCH11A6NNE9 402 aa19.86■□□□□ 0.77
SSBP4-201ENST00000270061 CHST1O43916 411 aa19.86■□□□□ 0.77
SSBP4-201ENST00000270061 ARF6P62330 175 aa19.86■□□□□ 0.77
SSBP4-201ENST00000270061 VAMP2P63027 116 aa19.86■□□□□ 0.77
SSBP4-201ENST00000270061 OR8H3Q8N146 312 aa19.86■□□□□ 0.77
SSBP4-201ENST00000270061 CTNNBIP1Q9NSA3 81 aaPredicted RBP19.86■□□□□ 0.77
SSBP4-201ENST00000270061 LYRM2Q9NU23 88 aaPredicted RBP19.86■□□□□ 0.77
SSBP4-201ENST00000270061 hCG_1809904A0A1W2PP81 198 aa19.85■□□□□ 0.77
SSBP4-201ENST00000270061 A0A1W2PPE2 198 aa19.85■□□□□ 0.77
SSBP4-201ENST00000270061 A0A1W2PR64 198 aa19.85■□□□□ 0.77
SSBP4-201ENST00000270061 A0A1W2PRV1 198 aa19.85■□□□□ 0.77
SSBP4-201ENST00000270061 CT45A6P0DMU7 189 aa19.85■□□□□ 0.77
SSBP4-201ENST00000270061 CT45A5P0DMU8 189 aa19.85■□□□□ 0.77
SSBP4-201ENST00000270061 CT45A7P0DMV0 189 aa19.85■□□□□ 0.77
SSBP4-201ENST00000270061 BRD3OSQ6XYD6 125 aa19.85■□□□□ 0.77
SSBP4-201ENST00000270061 ABHD12Q8N2K0 398 aa19.85■□□□□ 0.77
SSBP4-201ENST00000270061 ZNF48Q96MX3 618 aaPredicted RBP19.85■□□□□ 0.77
SSBP4-201ENST00000270061 TBX15Q96SF7 602 aa19.85■□□□□ 0.77
SSBP4-201ENST00000270061 SIRPDQ9H106 197 aa19.85■□□□□ 0.77
SSBP4-201ENST00000270061 SYNGR2O43760 224 aa19.85■□□□□ 0.77
SSBP4-201ENST00000270061 ATP6V1G1O75348 118 aa19.85■□□□□ 0.77
SSBP4-201ENST00000270061 NQO2P16083 231 aa19.85■□□□□ 0.77
SSBP4-201ENST00000270061 PAX9P55771 341 aa19.85■□□□□ 0.77
SSBP4-201ENST00000270061 BPIFB3P59826 476 aa19.85■□□□□ 0.77
SSBP4-201ENST00000270061 TAGLNQ01995 201 aaKnown RBP19.85■□□□□ 0.77
SSBP4-201ENST00000270061 CLLU1Q5K131 121 aa19.85■□□□□ 0.77
SSBP4-201ENST00000270061 ST6GALNAC6Q969X2 333 aa19.85■□□□□ 0.77
SSBP4-201ENST00000270061 SLC25A31Q9H0C2 315 aa19.85■□□□□ 0.77
SSBP4-201ENST00000270061 ZNRD1Q9P1U0 126 aa19.85■□□□□ 0.77
SSBP4-201ENST00000270061 TPT1P13693 172 aaKnown RBP19.84■□□□□ 0.77
SSBP4-201ENST00000270061 OR10X1Q8NGY0 326 aa19.84■□□□□ 0.77
SSBP4-201ENST00000270061 HSPB7Q9UBY9 170 aa19.84■□□□□ 0.77
SSBP4-201ENST00000270061 KPTNQ9Y664 436 aa19.84■□□□□ 0.77
SSBP4-201ENST00000270061 WSB1Q9Y6I7 421 aa19.84■□□□□ 0.77
SSBP4-201ENST00000270061 TMEM50AO95807 157 aa19.83■□□□□ 0.77
SSBP4-201ENST00000270061 GAPDHP04406 335 aaKnown RBP19.83■□□□□ 0.77
SSBP4-201ENST00000270061 EIF5AP63241 154 aaKnown RBP19.83■□□□□ 0.77
SSBP4-201ENST00000270061 AARDQ4LEZ3 155 aa19.83■□□□□ 0.77
SSBP4-201ENST00000270061 DHRS7BQ6IAN0 325 aaPredicted RBP19.83■□□□□ 0.77
SSBP4-201ENST00000270061 ALKAL2Q6UX46 152 aa19.83■□□□□ 0.77
SSBP4-201ENST00000270061 ONECUT1Q9UBC0 465 aa19.83■□□□□ 0.77
SSBP4-201ENST00000270061 FBXL17Q9UF56 701 aa19.83■□□□□ 0.77
SSBP4-201ENST00000270061 SOX21Q9Y651 276 aaPredicted RBP19.83■□□□□ 0.77
SSBP4-201ENST00000270061 RPS10-NUDT3A0A1W2PQS6 291 aa19.83■□□□□ 0.76
SSBP4-201ENST00000270061 TAS2R30P59541 319 aa19.83■□□□□ 0.76
SSBP4-201ENST00000270061 ERVK-16P61578 105 aa19.83■□□□□ 0.76
SSBP4-201ENST00000270061 POU2AF1Q16633 256 aa19.83■□□□□ 0.76
SSBP4-201ENST00000270061 BAP18Q8IXM2 172 aa19.83■□□□□ 0.76
SSBP4-201ENST00000270061 SLC7A5P1Q8MH63 180 aa19.83■□□□□ 0.76
SSBP4-201ENST00000270061 CENPVL3A0A0U1RRI6 287 aa19.82■□□□□ 0.76
SSBP4-201ENST00000270061 FAM24AA6NFZ4 105 aa19.82■□□□□ 0.76
SSBP4-201ENST00000270061 DNAJC9-AS1A6NH13 148 aa19.82■□□□□ 0.76
SSBP4-201ENST00000270061 MED6O75586 246 aa19.82■□□□□ 0.76
SSBP4-201ENST00000270061 NXPH3O95157 252 aa19.82■□□□□ 0.76
SSBP4-201ENST00000270061 RRASP10301 218 aa19.82■□□□□ 0.76
SSBP4-201ENST00000270061 PRTN3P24158 256 aa19.82■□□□□ 0.76
SSBP4-201ENST00000270061 RAB14P61106 215 aa19.82■□□□□ 0.76
SSBP4-201ENST00000270061 RPL23AP62750 156 aaKnown RBP19.82■□□□□ 0.76
SSBP4-201ENST00000270061 EWSR1Q01844 656 aaKnown RBP eCLIP19.82■□□□□ 0.764e-7■■■■□ 23.8
SSBP4-201ENST00000270061 TNFRSF9Q07011 255 aa19.82■□□□□ 0.76
SSBP4-201ENST00000270061 TMEM252Q8N6L7 170 aa19.82■□□□□ 0.76
SSBP4-201ENST00000270061 SMIM8Q96KF7 97 aa19.82■□□□□ 0.76
SSBP4-201ENST00000270061 DUX5Q96PT3 197 aa19.82■□□□□ 0.76
SSBP4-201ENST00000270061 IGHV2-26A0A0B4J1V2 119 aa19.81■□□□□ 0.76
SSBP4-201ENST00000270061 IL3RAP26951 378 aa19.81■□□□□ 0.76
SSBP4-201ENST00000270061 CAV2P51636 162 aa19.81■□□□□ 0.76
SSBP4-201ENST00000270061 PRRX1P54821 245 aa19.81■□□□□ 0.76
SSBP4-201ENST00000270061 RTL8BQ17RB0 113 aa19.81■□□□□ 0.76
SSBP4-201ENST00000270061 LHX4Q969G2 390 aa19.81■□□□□ 0.76
SSBP4-201ENST00000270061 IGSF23A1L1A6 192 aa19.8■□□□□ 0.76
SSBP4-201ENST00000270061 M0R1W7 72 aa19.8■□□□□ 0.76
SSBP4-201ENST00000270061 JTBO76095 146 aa19.8■□□□□ 0.76
SSBP4-201ENST00000270061 CRYZL1O95825 349 aa19.8■□□□□ 0.76
SSBP4-201ENST00000270061 IGLV1-47P01700 117 aa19.8■□□□□ 0.76
SSBP4-201ENST00000270061 UBE2KP61086 200 aa19.8■□□□□ 0.76
SSBP4-201ENST00000270061 BAXQ07812 192 aa19.8■□□□□ 0.76
SSBP4-201ENST00000270061 RUSC1-AS1Q66K80 236 aa19.8■□□□□ 0.76
SSBP4-201ENST00000270061 VMO1Q7Z5L0 202 aa19.8■□□□□ 0.76
SSBP4-201ENST00000270061 BEND2Q8NDZ0 799 aa19.8■□□□□ 0.76
SSBP4-201ENST00000270061 OR5AN1Q8NGI8 311 aa19.8■□□□□ 0.76
SSBP4-201ENST00000270061 CLEC7AQ9BXN2 247 aa19.8■□□□□ 0.76
SSBP4-201ENST00000270061 SLC35D1Q9NTN3 355 aa19.8■□□□□ 0.76
SSBP4-201ENST00000270061 CACFD1Q9UGQ2 172 aa19.8■□□□□ 0.76
SSBP4-201ENST00000270061 NHLH2Q02577 135 aa19.8■□□□□ 0.76
SSBP4-201ENST00000270061 KIR3DL3Q8N743 410 aa19.8■□□□□ 0.76
SSBP4-201ENST00000270061 MDFIC2A0A1B0GVS7 189 aa19.79■□□□□ 0.76
SSBP4-201ENST00000270061 HRASP01112 189 aa19.79■□□□□ 0.76
SSBP4-201ENST00000270061 OR9G9P0C7N8 305 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms