RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 CEACAM8P31997 349 aaPredicted RBP10.64□□□□□ -0.71
CPSF6-201ENST00000266679 PSMB3P49720 205 aa10.64□□□□□ -0.71
CPSF6-201ENST00000266679 SPCS3P61009 180 aa10.64□□□□□ -0.71
CPSF6-201ENST00000266679 PNRC1Q12796 327 aaPredicted RBP10.64□□□□□ -0.71
CPSF6-201ENST00000266679 SLC16A13Q7RTY0 426 aa10.64□□□□□ -0.71
CPSF6-201ENST00000266679 RAB24Q969Q5 203 aa10.64□□□□□ -0.71
CPSF6-201ENST00000266679 RPUSD4Q96CM3 377 aaKnown RBP10.64□□□□□ -0.71
CPSF6-201ENST00000266679 SMIM7Q9BQ49 75 aa10.64□□□□□ -0.71
CPSF6-201ENST00000266679 GCM1Q9NP62 436 aa10.64□□□□□ -0.71
CPSF6-201ENST00000266679 TMEM140Q9NV12 185 aa10.64□□□□□ -0.71
CPSF6-201ENST00000266679 GFOD1Q9NXC2 390 aa10.64□□□□□ -0.71
CPSF6-201ENST00000266679 GYPAP02724 150 aa10.64□□□□□ -0.71
CPSF6-201ENST00000266679 CD40P25942 277 aa10.64□□□□□ -0.71
CPSF6-201ENST00000266679 CCKARP32238 428 aa10.64□□□□□ -0.71
CPSF6-201ENST00000266679 GATA4P43694 442 aa10.64□□□□□ -0.71
CPSF6-201ENST00000266679 SELENOVP59797 346 aa10.64□□□□□ -0.71
CPSF6-201ENST00000266679 WDR25Q64LD2 544 aaPredicted RBP10.64□□□□□ -0.71
CPSF6-201ENST00000266679 STUMQ69YW2 141 aa10.64□□□□□ -0.71
CPSF6-201ENST00000266679 TGIF2LYQ8IUE0 185 aa10.64□□□□□ -0.71
CPSF6-201ENST00000266679 GAFA1Q96PS6 74 aa10.64□□□□□ -0.71
CPSF6-201ENST00000266679 CCL13Q99616 98 aa10.64□□□□□ -0.71
CPSF6-201ENST00000266679 SSX3Q99909 188 aa10.64□□□□□ -0.71
CPSF6-201ENST00000266679 HEYLQ9NQ87 328 aaPredicted RBP10.64□□□□□ -0.71
CPSF6-201ENST00000266679 SPTBN1Q01082 2364 aaKnown RBP10.63□□□□□ -0.71
CPSF6-201ENST00000266679 DYSFO75923 2080 aa10.63□□□□□ -0.71
CPSF6-201ENST00000266679 SAA2-SAA4A0A096LPE2 208 aa10.63□□□□□ -0.71
CPSF6-201ENST00000266679 FAM90A9PA6NNJ1 464 aa10.63□□□□□ -0.71
CPSF6-201ENST00000266679 RBFOX2O43251 390 aaKnown RBP eCLIP10.63□□□□□ -0.718e-10■□□□□ 10.6
CPSF6-201ENST00000266679 SAA2P0DJI9 122 aaPredicted RBP10.63□□□□□ -0.71
CPSF6-201ENST00000266679 CGB3P0DN86 165 aa10.63□□□□□ -0.71
CPSF6-201ENST00000266679 CGB7P0DN87 165 aa10.63□□□□□ -0.71
CPSF6-201ENST00000266679 MDKP21741 143 aaPredicted RBP10.63□□□□□ -0.71
CPSF6-201ENST00000266679 KIR2DS2P43631 304 aa10.63□□□□□ -0.71
CPSF6-201ENST00000266679 GNG10P50151 68 aa10.63□□□□□ -0.71
CPSF6-201ENST00000266679 RELBQ01201 579 aa10.63□□□□□ -0.71
CPSF6-201ENST00000266679 KLRB1Q12918 225 aa10.63□□□□□ -0.71
CPSF6-201ENST00000266679 ADIRFQ15847 76 aa10.63□□□□□ -0.71
CPSF6-201ENST00000266679 CT45A1Q5HYN5 189 aa10.63□□□□□ -0.71
CPSF6-201ENST00000266679 NCMAPQ5T1S8 102 aa10.63□□□□□ -0.71
CPSF6-201ENST00000266679 FAM216BQ8N7L0 139 aa10.63□□□□□ -0.71
CPSF6-201ENST00000266679 OR4S2Q8NH73 311 aa10.63□□□□□ -0.71
CPSF6-201ENST00000266679 CT45A3Q8NHU0 189 aa10.63□□□□□ -0.71
CPSF6-201ENST00000266679 NANPQ8TBE9 248 aa10.63□□□□□ -0.71
CPSF6-201ENST00000266679 FAM222BQ8WU58 562 aa10.63□□□□□ -0.71
CPSF6-201ENST00000266679 DCAF16Q9NXF7 216 aa10.63□□□□□ -0.71
CPSF6-201ENST00000266679 TRGV10A0A0A0MS01 117 aa10.62□□□□□ -0.71
CPSF6-201ENST00000266679 KBTBD11-OT1A0A1B0GTJ5 212 aa10.62□□□□□ -0.71
CPSF6-201ENST00000266679 A8MXE2 369 aa10.62□□□□□ -0.71
CPSF6-201ENST00000266679 RRHO14718 337 aa10.62□□□□□ -0.71
CPSF6-201ENST00000266679 S100A8P05109 93 aa10.62□□□□□ -0.71
CPSF6-201ENST00000266679 CD1BP29016 333 aa10.62□□□□□ -0.71
CPSF6-201ENST00000266679 CDC34P49427 236 aaPredicted RBP10.62□□□□□ -0.71
CPSF6-201ENST00000266679 RAB7AP51149 207 aa10.62□□□□□ -0.71
CPSF6-201ENST00000266679 ACOT6Q3I5F7 207 aaPredicted RBP10.62□□□□□ -0.71
CPSF6-201ENST00000266679 AARDQ4LEZ3 155 aa10.62□□□□□ -0.71
CPSF6-201ENST00000266679 GCSAMLQ5JQS6 135 aa10.62□□□□□ -0.71
CPSF6-201ENST00000266679 TCF23Q7RTU1 214 aa10.62□□□□□ -0.71
CPSF6-201ENST00000266679 OR4F5Q8NH21 305 aa10.62□□□□□ -0.71
CPSF6-201ENST00000266679 FAM216AQ8WUB2 273 aa10.62□□□□□ -0.71
CPSF6-201ENST00000266679 DDB2Q92466 427 aa10.62□□□□□ -0.71
CPSF6-201ENST00000266679 SDSLQ96GA7 329 aa10.62□□□□□ -0.71
CPSF6-201ENST00000266679 OR4F4Q96R69 305 aa10.62□□□□□ -0.71
CPSF6-201ENST00000266679 MANBALQ9NQG1 85 aa10.62□□□□□ -0.71
CPSF6-201ENST00000266679 IL19Q9UHD0 177 aa10.62□□□□□ -0.71
CPSF6-201ENST00000266679 WDR83OSQ9Y284 106 aa10.62□□□□□ -0.71
CPSF6-201ENST00000266679 S100A9P06702 114 aaKnown RBP10.62□□□□□ -0.71
CPSF6-201ENST00000266679 TNFSF4P23510 183 aa10.62□□□□□ -0.71
CPSF6-201ENST00000266679 VDAC2P45880 294 aaPredicted RBP10.62□□□□□ -0.71
CPSF6-201ENST00000266679 RPP30P78346 268 aaKnown RBP10.62□□□□□ -0.71
CPSF6-201ENST00000266679 PMS2P11Q13670 270 aa10.62□□□□□ -0.71
CPSF6-201ENST00000266679 PRR30Q53SZ7 412 aaPredicted RBP10.62□□□□□ -0.71
CPSF6-201ENST00000266679 WFDC8Q8IUA0 241 aa10.62□□□□□ -0.71
CPSF6-201ENST00000266679 C1orf87Q8N0U7 546 aa10.62□□□□□ -0.71
CPSF6-201ENST00000266679 LYG1Q8N1E2 194 aa10.62□□□□□ -0.71
CPSF6-201ENST00000266679 Q8N7P7 452 aa10.62□□□□□ -0.71
CPSF6-201ENST00000266679 NAT8Q9UHE5 227 aa10.62□□□□□ -0.71
CPSF6-201ENST00000266679 TRAV38-1A0A0B4J264 116 aa10.61□□□□□ -0.71
CPSF6-201ENST00000266679 CLDN34H7C241 214 aa10.61□□□□□ -0.71
CPSF6-201ENST00000266679 PAGE4O60829 102 aa10.61□□□□□ -0.71
CPSF6-201ENST00000266679 CLN5O75503 358 aa10.61□□□□□ -0.71
CPSF6-201ENST00000266679 KBTBD11O94819 623 aa10.61□□□□□ -0.71
CPSF6-201ENST00000266679 SMIM6P0DI80 62 aa10.61□□□□□ -0.71
CPSF6-201ENST00000266679 NDUFA6P56556 154 aa10.61□□□□□ -0.71
CPSF6-201ENST00000266679 KRTCAP3Q53RY4 240 aa10.61□□□□□ -0.71
CPSF6-201ENST00000266679 SNRNP40Q96DI7 357 aaKnown RBP10.61□□□□□ -0.71
CPSF6-201ENST00000266679 RAB9BQ9NP90 201 aa10.61□□□□□ -0.71
CPSF6-201ENST00000266679 SH3BGRL2Q9UJC5 107 aa10.61□□□□□ -0.71
CPSF6-201ENST00000266679 TCF19Q9Y242 345 aa10.61□□□□□ -0.71
CPSF6-201ENST00000266679 HIVEP3Q5T1R4 2406 aa10.61□□□□□ -0.71
CPSF6-201ENST00000266679 YLPM1P49750 1951 aaKnown RBP10.61□□□□□ -0.71
CPSF6-201ENST00000266679 CENPEQ02224 2701 aa10.61□□□□□ -0.71
CPSF6-201ENST00000266679 ICE1Q9Y2F5 2266 aa10.61□□□□□ -0.71
CPSF6-201ENST00000266679 UQCRFS1P47985 274 aa10.61□□□□□ -0.71
CPSF6-201ENST00000266679 MRPS11P82912 194 aaKnown RBP10.61□□□□□ -0.71
CPSF6-201ENST00000266679 CYP2G1PQ6ZSU1 146 aa10.61□□□□□ -0.71
CPSF6-201ENST00000266679 ABHD12Q8N2K0 398 aa10.61□□□□□ -0.71
CPSF6-201ENST00000266679 OR52E5Q8NH55 327 aa10.61□□□□□ -0.71
CPSF6-201ENST00000266679 FAM210BQ96KR6 192 aa10.61□□□□□ -0.71
CPSF6-201ENST00000266679 PARLQ9H300 379 aa10.61□□□□□ -0.71
CPSF6-201ENST00000266679 IDI2-AS1Q9NZ38 188 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms